RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CHD2O14647 1828 aaKnown RBP17.58■□□□□ 0.41
DDX39A-202ENST00000324340 POGKQ9P215 609 aa17.58■□□□□ 0.4
DDX39A-202ENST00000324340 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
DDX39A-202ENST00000324340 MIER1Q8N108 512 aa17.57■□□□□ 0.4
DDX39A-202ENST00000324340 POLR3GLQ9BT43 218 aa17.57■□□□□ 0.4
DDX39A-202ENST00000324340 EVC2Q86UK5 1308 aa17.57■□□□□ 0.4
DDX39A-202ENST00000324340 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
DDX39A-202ENST00000324340 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
DDX39A-202ENST00000324340 ADGRB2O60241 1585 aa17.55■□□□□ 0.4
DDX39A-202ENST00000324340 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
DDX39A-202ENST00000324340 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
DDX39A-202ENST00000324340 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
DDX39A-202ENST00000324340 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX39A-202ENST00000324340 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-202ENST00000324340 ILDR1Q86SU0 546 aaPredicted RBP17.52■□□□□ 0.39
DDX39A-202ENST00000324340 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.39
DDX39A-202ENST00000324340 STRCQ7RTU9 1775 aa17.51■□□□□ 0.39
DDX39A-202ENST00000324340 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-202ENST00000324340 ANP32CO43423 234 aa17.51■□□□□ 0.39
DDX39A-202ENST00000324340 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
DDX39A-202ENST00000324340 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
DDX39A-202ENST00000324340 HSPA2P54652 639 aa17.49■□□□□ 0.39
DDX39A-202ENST00000324340 PANK3Q9H999 370 aa17.49■□□□□ 0.39
DDX39A-202ENST00000324340 KCNA6P17658 529 aa17.48■□□□□ 0.39
DDX39A-202ENST00000324340 WASLO00401 505 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-202ENST00000324340 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
DDX39A-202ENST00000324340 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
DDX39A-202ENST00000324340 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
DDX39A-202ENST00000324340 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
DDX39A-202ENST00000324340 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-202ENST00000324340 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
DDX39A-202ENST00000324340 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
DDX39A-202ENST00000324340 ANKRD36BQ8N2N9 1353 aa17.43■□□□□ 0.38
DDX39A-202ENST00000324340 USP32Q8NFA0 1604 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 SLC12A5Q9H2X9 1139 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 ATP7BP35670 1465 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
DDX39A-202ENST00000324340 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
DDX39A-202ENST00000324340 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
DDX39A-202ENST00000324340 CDC42BPGQ6DT37 1551 aa17.41■□□□□ 0.38
DDX39A-202ENST00000324340 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
DDX39A-202ENST00000324340 TMC1Q8TDI8 760 aa17.4■□□□□ 0.38
DDX39A-202ENST00000324340 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
DDX39A-202ENST00000324340 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
DDX39A-202ENST00000324340 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-202ENST00000324340 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
DDX39A-202ENST00000324340 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
DDX39A-202ENST00000324340 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
DDX39A-202ENST00000324340 RALBP1Q15311 655 aa17.38■□□□□ 0.37
DDX39A-202ENST00000324340 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
DDX39A-202ENST00000324340 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
DDX39A-202ENST00000324340 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
DDX39A-202ENST00000324340 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
DDX39A-202ENST00000324340 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
DDX39A-202ENST00000324340 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
DDX39A-202ENST00000324340 NCOA3Q9Y6Q9 1424 aa17.36■□□□□ 0.37
DDX39A-202ENST00000324340 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
DDX39A-202ENST00000324340 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
DDX39A-202ENST00000324340 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
DDX39A-202ENST00000324340 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
DDX39A-202ENST00000324340 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
DDX39A-202ENST00000324340 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
DDX39A-202ENST00000324340 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
DDX39A-202ENST00000324340 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
DDX39A-202ENST00000324340 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
DDX39A-202ENST00000324340 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
DDX39A-202ENST00000324340 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-202ENST00000324340 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-202ENST00000324340 RGPD8O14715 1765 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-202ENST00000324340 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
DDX39A-202ENST00000324340 NSD2O96028 1365 aa17.31■□□□□ 0.36
DDX39A-202ENST00000324340 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
DDX39A-202ENST00000324340 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
DDX39A-202ENST00000324340 DCCP43146 1447 aa17.29■□□□□ 0.36
DDX39A-202ENST00000324340 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
DDX39A-202ENST00000324340 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
DDX39A-202ENST00000324340 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
DDX39A-202ENST00000324340 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
DDX39A-202ENST00000324340 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
DDX39A-202ENST00000324340 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
DDX39A-202ENST00000324340 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-202ENST00000324340 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-202ENST00000324340 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
DDX39A-202ENST00000324340 C19orf44Q9H6X5 657 aa17.27■□□□□ 0.35
DDX39A-202ENST00000324340 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
DDX39A-202ENST00000324340 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
DDX39A-202ENST00000324340 LRRC7Q96NW7 1537 aa17.26■□□□□ 0.35
DDX39A-202ENST00000324340 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-202ENST00000324340 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
DDX39A-202ENST00000324340 NLRP13Q86W25 1043 aa17.25■□□□□ 0.35
DDX39A-202ENST00000324340 ACEP12821 1306 aa17.24■□□□□ 0.35
DDX39A-202ENST00000324340 ZNF335Q9H4Z2 1342 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-202ENST00000324340 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
DDX39A-202ENST00000324340 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
DDX39A-202ENST00000324340 USP6P35125 1406 aa17.23■□□□□ 0.35
DDX39A-202ENST00000324340 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
DDX39A-202ENST00000324340 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
DDX39A-202ENST00000324340 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms