RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 TXNDC2Q86VQ3 553 aa35.72■■■■□ 3.31
TM6SF1-202ENST00000322019 SRPK2P78362 688 aaKnown RBP35.71■■■■□ 3.31
TM6SF1-202ENST00000322019 ABCC11Q96J66 1382 aa35.67■■■■□ 3.3
TM6SF1-202ENST00000322019 ADAMTS13Q76LX8 1427 aa35.66■■■■□ 3.3
TM6SF1-202ENST00000322019 NSD3Q9BZ95 1437 aa35.66■■■■□ 3.3
TM6SF1-202ENST00000322019 DLC1Q96QB1 1528 aa35.65■■■■□ 3.3
TM6SF1-202ENST00000322019 PPP2R1AP30153 589 aa35.64■■■■□ 3.3
TM6SF1-202ENST00000322019 PLEKHG1Q9ULL1 1385 aa35.63■■■■□ 3.29
TM6SF1-202ENST00000322019 SLC26A8Q96RN1 970 aa35.63■■■■□ 3.29
TM6SF1-202ENST00000322019 EID1Q9Y6B2 187 aa35.63■■■■□ 3.29
TM6SF1-202ENST00000322019 NPC1L1Q9UHC9 1359 aa35.62■■■■□ 3.29
TM6SF1-202ENST00000322019 PUS7Q96PZ0 661 aaKnown RBP35.61■■■■□ 3.29
TM6SF1-202ENST00000322019 ADAMTSL3P82987 1691 aa35.61■■■■□ 3.29
TM6SF1-202ENST00000322019 SLIT1O75093 1534 aa35.61■■■■□ 3.29
TM6SF1-202ENST00000322019 CDK19Q9BWU1 502 aa35.61■■■■□ 3.29
TM6SF1-202ENST00000322019 ARHGAP23Q9P227 1491 aa35.61■■■■□ 3.29
TM6SF1-202ENST00000322019 THEMISQ8N1K5 641 aaPredicted RBP35.6■■■■□ 3.29
TM6SF1-202ENST00000322019 ZBED9Q6R2W3 1325 aa35.56■■■■□ 3.28
TM6SF1-202ENST00000322019 ANKRD36BQ8N2N9 1353 aa35.55■■■■□ 3.28
TM6SF1-202ENST00000322019 CEP170BQ9Y4F5 1589 aaPredicted RBP35.55■■■■□ 3.28
TM6SF1-202ENST00000322019 A0A1W2PP64 1363 aa35.52■■■■□ 3.28
TM6SF1-202ENST00000322019 ATAD2Q6PL18 1390 aa35.52■■■■□ 3.28
TM6SF1-202ENST00000322019 ROBO2Q9HCK4 1378 aa35.52■■■■□ 3.28
TM6SF1-202ENST00000322019 TECPR2O15040 1411 aa35.51■■■■□ 3.28
TM6SF1-202ENST00000322019 KNDC1Q76NI1 1749 aa35.51■■■■□ 3.27
TM6SF1-202ENST00000322019 MED14O60244 1454 aa35.5■■■■□ 3.27
TM6SF1-202ENST00000322019 CPS1P31327 1500 aa35.49■■■■□ 3.27
TM6SF1-202ENST00000322019 TNNT2P45379 298 aaPredicted RBP35.48■■■■□ 3.27
TM6SF1-202ENST00000322019 PTPRUQ92729 1446 aa35.48■■■■□ 3.27
TM6SF1-202ENST00000322019 CABP1Q9NZU7 370 aa35.47■■■■□ 3.27
TM6SF1-202ENST00000322019 FAM135BQ49AJ0 1406 aa35.46■■■■□ 3.27
TM6SF1-202ENST00000322019 CD163L1Q9NR16 1453 aa35.45■■■■□ 3.27
TM6SF1-202ENST00000322019 CGNL1Q0VF96 1302 aa35.45■■■■□ 3.26
TM6SF1-202ENST00000322019 NINLQ9Y2I6 1382 aa35.45■■■■□ 3.26
TM6SF1-202ENST00000322019 MORC1Q86VD1 984 aa35.44■■■■□ 3.26
TM6SF1-202ENST00000322019 WASLO00401 505 aaPredicted RBP35.43■■■■□ 3.26
TM6SF1-202ENST00000322019 USP32Q8NFA0 1604 aa35.41■■■■□ 3.26
TM6SF1-202ENST00000322019 SIRT1Q96EB6 747 aa35.41■■■■□ 3.26
TM6SF1-202ENST00000322019 NCKAP5LQ9HCH0 1330 aa35.39■■■■□ 3.26
TM6SF1-202ENST00000322019 SALL2Q9Y467 1007 aaPredicted RBP35.39■■■■□ 3.26
TM6SF1-202ENST00000322019 TERF2IPQ9NYB0 399 aa35.39■■■■□ 3.26
TM6SF1-202ENST00000322019 AMOTL2Q9Y2J4 779 aa35.39■■■■□ 3.26
TM6SF1-202ENST00000322019 TBX22Q9Y458 520 aa35.39■■■■□ 3.26
TM6SF1-202ENST00000322019 ADAMTS8Q9UP79 889 aa35.38■■■■□ 3.25
TM6SF1-202ENST00000322019 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.34■■■■□ 3.25
TM6SF1-202ENST00000322019 ZNF142P52746 1687 aaPredicted RBP35.34■■■■□ 3.25
TM6SF1-202ENST00000322019 GGNBP2Q9H3C7 697 aa35.33■■■■□ 3.25
TM6SF1-202ENST00000322019 HDGFL2Q7Z4V5 671 aaPredicted RBP35.33■■■■□ 3.25
TM6SF1-202ENST00000322019 WDR43Q15061 677 aaKnown RBP eCLIP35.32■■■■□ 3.24
TM6SF1-202ENST00000322019 BLMP54132 1417 aaPredicted RBP35.31■■■■□ 3.24
TM6SF1-202ENST00000322019 NUDT16Q96DE0 195 aaKnown RBP35.31■■■■□ 3.24
TM6SF1-202ENST00000322019 PPIP5K1Q6PFW1 1433 aa35.3■■■■□ 3.24
TM6SF1-202ENST00000322019 NUTM2FA1L443 756 aa35.29■■■■□ 3.24
TM6SF1-202ENST00000322019 SUPT16HQ9Y5B9 1047 aaKnown RBP35.29■■■■□ 3.24
TM6SF1-202ENST00000322019 ANKLE2Q86XL3 938 aa35.28■■■■□ 3.24
TM6SF1-202ENST00000322019 DIP2AQ14689 1571 aa35.28■■■■□ 3.24
TM6SF1-202ENST00000322019 PRR36Q9H6K5 1346 aa35.28■■■■□ 3.24
TM6SF1-202ENST00000322019 SETD1BQ9UPS6 1966 aaKnown RBP35.27■■■■□ 3.24
TM6SF1-202ENST00000322019 FYB1O15117 783 aa35.27■■■■□ 3.24
TM6SF1-202ENST00000322019 NSD2O96028 1365 aa35.26■■■■□ 3.24
TM6SF1-202ENST00000322019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.25■■■■□ 3.23
TM6SF1-202ENST00000322019 FKBP8Q14318 412 aa35.25■■■■□ 3.23
TM6SF1-202ENST00000322019 ATP7BP35670 1465 aa35.24■■■■□ 3.23
TM6SF1-202ENST00000322019 KCNA6P17658 529 aa35.23■■■■□ 3.23
TM6SF1-202ENST00000322019 MTHFSP49914 203 aa35.22■■■■□ 3.23
TM6SF1-202ENST00000322019 CCDC61Q9Y6R9 512 aa35.21■■■■□ 3.23
TM6SF1-202ENST00000322019 PTCH1Q13635 1447 aa35.21■■■■□ 3.23
TM6SF1-202ENST00000322019 ADGRB2O60241 1585 aa35.2■■■■□ 3.23
TM6SF1-202ENST00000322019 POLR3AO14802 1390 aaPredicted RBP35.19■■■■□ 3.22
TM6SF1-202ENST00000322019 CCDC146Q8IYE0 955 aa35.19■■■■□ 3.22
TM6SF1-202ENST00000322019 XRN1Q8IZH2 1706 aaKnown RBP35.19■■■■□ 3.22
TM6SF1-202ENST00000322019 INSRP06213 1382 aa35.18■■■■□ 3.22
TM6SF1-202ENST00000322019 CPSF1Q10570 1443 aaKnown RBP35.17■■■■□ 3.22
TM6SF1-202ENST00000322019 SMG6Q86US8 1419 aaKnown RBP35.16■■■■□ 3.22
TM6SF1-202ENST00000322019 NUDCQ9Y266 331 aa35.14■■■■□ 3.22
TM6SF1-202ENST00000322019 CDC42BPGQ6DT37 1551 aa35.14■■■■□ 3.22
TM6SF1-202ENST00000322019 NEFLP07196 543 aa35.13■■■■□ 3.22
TM6SF1-202ENST00000322019 IRX6P78412 446 aaPredicted RBP35.13■■■■□ 3.21
TM6SF1-202ENST00000322019 KIF20BQ96Q89 1820 aa35.12■■■■□ 3.21
TM6SF1-202ENST00000322019 RBM33Q96EV2 1170 aaKnown RBP35.12■■■■□ 3.21
TM6SF1-202ENST00000322019 ANKRD26Q9UPS8 1709 aa35.11■■■■□ 3.21
TM6SF1-202ENST00000322019 SHPRHQ149N8 1683 aa35.11■■■■□ 3.21
TM6SF1-202ENST00000322019 FBLN1P23142 703 aa35.1■■■■□ 3.21
TM6SF1-202ENST00000322019 PIK3R4Q99570 1358 aa35.09■■■■□ 3.21
TM6SF1-202ENST00000322019 NME9Q86XW9 330 aa35.09■■■■□ 3.21
TM6SF1-202ENST00000322019 ZRANB1Q9UGI0 708 aa35.09■■■■□ 3.21
TM6SF1-202ENST00000322019 CDCA7LQ96GN5 454 aa35.09■■■■□ 3.21
TM6SF1-202ENST00000322019 EDC4Q6P2E9 1401 aaKnown RBP35.08■■■■□ 3.21
TM6SF1-202ENST00000322019 NKTRP30414 1462 aaKnown RBP35.07■■■■□ 3.2
TM6SF1-202ENST00000322019 NPHP4O75161 1426 aaPredicted RBP35.06■■■■□ 3.2
TM6SF1-202ENST00000322019 TOPAZ1Q8N9V7 1692 aa35.05■■■■□ 3.2
TM6SF1-202ENST00000322019 ITSN1Q15811 1721 aa35.04■■■■□ 3.2
TM6SF1-202ENST00000322019 MON2Q7Z3U7 1717 aa35.04■■■■□ 3.2
TM6SF1-202ENST00000322019 ACEP12821 1306 aa35.04■■■■□ 3.2
TM6SF1-202ENST00000322019 CFAP53Q96M91 514 aa35.04■■■■□ 3.2
TM6SF1-202ENST00000322019 AKAP12Q02952 1782 aa35.03■■■■□ 3.2
TM6SF1-202ENST00000322019 CHD2O14647 1828 aaKnown RBP35.02■■■■□ 3.2
TM6SF1-202ENST00000322019 APAF1O14727 1248 aa35.02■■■■□ 3.2
TM6SF1-202ENST00000322019 PMFBP1Q8TBY8 1022 aa35.01■■■■□ 3.2
TM6SF1-202ENST00000322019 RGPD8O14715 1765 aaPredicted RBP34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms