RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 TECPR2O15040 1411 aa29.81■■■□□ 2.36
SERF1A-201ENST00000317633 CDK12Q9NYV4 1490 aaPredicted RBP29.8■■■□□ 2.36
SERF1A-201ENST00000317633 LRPPRCP42704 1394 aaKnown RBP29.8■■■□□ 2.36
SERF1A-201ENST00000317633 STK26Q9P289 416 aa29.8■■■□□ 2.36
SERF1A-201ENST00000317633 KNDC1Q76NI1 1749 aa29.79■■■□□ 2.36
SERF1A-201ENST00000317633 PIK3C2GO75747 1445 aa29.79■■■□□ 2.36
SERF1A-201ENST00000317633 ABCC11Q96J66 1382 aa29.78■■■□□ 2.36
SERF1A-201ENST00000317633 ESCO1Q5FWF5 840 aa29.78■■■□□ 2.36
SERF1A-201ENST00000317633 NPHP3Q7Z494 1330 aa29.77■■■□□ 2.36
SERF1A-201ENST00000317633 NGLY1Q96IV0 654 aa29.77■■■□□ 2.36
SERF1A-201ENST00000317633 ADAMTS2O95450 1211 aa29.76■■■□□ 2.35
SERF1A-201ENST00000317633 QTRT2Q9H974 415 aaKnown RBP29.76■■■□□ 2.35
SERF1A-201ENST00000317633 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
SERF1A-201ENST00000317633 WAPLQ7Z5K2 1190 aa29.75■■■□□ 2.35
SERF1A-201ENST00000317633 RBM6P78332 1123 aaKnown RBP29.73■■■□□ 2.35
SERF1A-201ENST00000317633 UPF1Q92900 1129 aaKnown RBP eCLIP29.73■■■□□ 2.35
SERF1A-201ENST00000317633 YTHDC2Q9H6S0 1430 aaKnown RBP29.71■■■□□ 2.35
SERF1A-201ENST00000317633 COL22A1Q8NFW1 1626 aaPredicted RBP29.71■■■□□ 2.35
SERF1A-201ENST00000317633 FOXO3O43524 673 aa29.68■■■□□ 2.34
SERF1A-201ENST00000317633 SIRT1Q96EB6 747 aa29.68■■■□□ 2.34
SERF1A-201ENST00000317633 C14orf93Q9H972 538 aaKnown RBP29.68■■■□□ 2.34
SERF1A-201ENST00000317633 PLEKHH1Q9ULM0 1364 aa29.67■■■□□ 2.34
SERF1A-201ENST00000317633 NUTM2FA1L443 756 aa29.67■■■□□ 2.34
SERF1A-201ENST00000317633 PXDNQ92626 1479 aa29.67■■■□□ 2.34
SERF1A-201ENST00000317633 FMN2Q9NZ56 1722 aa29.66■■■□□ 2.34
SERF1A-201ENST00000317633 MYOM2P54296 1465 aa29.66■■■□□ 2.34
SERF1A-201ENST00000317633 DHX57Q6P158 1386 aaKnown RBP29.65■■■□□ 2.34
SERF1A-201ENST00000317633 RAB3GAP2Q9H2M9 1393 aa29.65■■■□□ 2.34
SERF1A-201ENST00000317633 USP21Q9UK80 565 aa29.65■■■□□ 2.34
SERF1A-201ENST00000317633 NRXN1Q9ULB1 1477 aa29.65■■■□□ 2.34
SERF1A-201ENST00000317633 RGS12O14924 1447 aa29.62■■■□□ 2.33
SERF1A-201ENST00000317633 FNBP4Q8N3X1 1017 aaPredicted RBP29.62■■■□□ 2.33
SERF1A-201ENST00000317633 TRPC5Q9UL62 973 aaPredicted RBP29.62■■■□□ 2.33
SERF1A-201ENST00000317633 KIF1AQ12756 1690 aa29.62■■■□□ 2.33
SERF1A-201ENST00000317633 XPCQ01831 940 aaPredicted RBP29.61■■■□□ 2.33
SERF1A-201ENST00000317633 CFAP70Q5T0N1 1121 aa29.61■■■□□ 2.33
SERF1A-201ENST00000317633 MARF1Q9Y4F3 1742 aaKnown RBP29.6■■■□□ 2.33
SERF1A-201ENST00000317633 RGPD8O14715 1765 aaPredicted RBP29.54■■■□□ 2.32
SERF1A-201ENST00000317633 SPATA31A3Q5VYP0 1347 aa29.52■■■□□ 2.32
SERF1A-201ENST00000317633 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
SERF1A-201ENST00000317633 KRT28Q7Z3Y7 464 aa29.52■■■□□ 2.32
SERF1A-201ENST00000317633 PRAM1Q96QH2 718 aa29.52■■■□□ 2.32
SERF1A-201ENST00000317633 ATRNO75882 1429 aa29.52■■■□□ 2.32
SERF1A-201ENST00000317633 POGKQ9P215 609 aa29.51■■■□□ 2.31
SERF1A-201ENST00000317633 PHF8Q9UPP1 1060 aa29.51■■■□□ 2.31
SERF1A-201ENST00000317633 PSME1Q06323 249 aa29.5■■■□□ 2.31
SERF1A-201ENST00000317633 SAFB2Q14151 953 aaKnown RBP eCLIP29.49■■■□□ 2.31
SERF1A-201ENST00000317633 HRCP23327 699 aa29.48■■■□□ 2.31
SERF1A-201ENST00000317633 ATAD2Q6PL18 1390 aa29.48■■■□□ 2.31
SERF1A-201ENST00000317633 BCL9LQ86UU0 1499 aa29.48■■■□□ 2.31
SERF1A-201ENST00000317633 STAC3Q96MF2 364 aa29.47■■■□□ 2.31
SERF1A-201ENST00000317633 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.45■■■□□ 2.3
SERF1A-201ENST00000317633 ADGRB1O14514 1584 aa29.44■■■□□ 2.3
SERF1A-201ENST00000317633 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
SERF1A-201ENST00000317633 TNS3Q68CZ2 1445 aa29.44■■■□□ 2.3
SERF1A-201ENST00000317633 HAP1P54257 671 aaPredicted RBP29.43■■■□□ 2.3
SERF1A-201ENST00000317633 KDM2AQ9Y2K7 1162 aa29.43■■■□□ 2.3
SERF1A-201ENST00000317633 ANKARQ7Z5J8 1434 aa29.43■■■□□ 2.3
SERF1A-201ENST00000317633 GJD4Q96KN9 370 aaPredicted RBP29.42■■■□□ 2.3
SERF1A-201ENST00000317633 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
SERF1A-201ENST00000317633 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
SERF1A-201ENST00000317633 USP32Q8NFA0 1604 aa29.41■■■□□ 2.3
SERF1A-201ENST00000317633 SBNO1A3KN83 1393 aa29.4■■■□□ 2.3
SERF1A-201ENST00000317633 UNC5CLQ8IV45 518 aa29.4■■■□□ 2.3
SERF1A-201ENST00000317633 SLIT2O94813 1529 aa29.38■■■□□ 2.29
SERF1A-201ENST00000317633 ARHGEF10O15013 1369 aa29.38■■■□□ 2.29
SERF1A-201ENST00000317633 EIF3AQ14152 1382 aaKnown RBP29.38■■■□□ 2.29
SERF1A-201ENST00000317633 LMOD2Q6P5Q4 547 aa29.37■■■□□ 2.29
SERF1A-201ENST00000317633 PMFBP1Q8TBY8 1022 aa29.36■■■□□ 2.29
SERF1A-201ENST00000317633 HIRIP3Q9BW71 556 aaPredicted RBP29.34■■■□□ 2.29
SERF1A-201ENST00000317633 MINK1Q8N4C8 1332 aaPredicted RBP29.33■■■□□ 2.29
SERF1A-201ENST00000317633 CABLES1Q8TDN4 633 aa29.32■■■□□ 2.28
SERF1A-201ENST00000317633 ABCA3Q99758 1704 aa29.31■■■□□ 2.28
SERF1A-201ENST00000317633 RALGAPBQ86X10 1494 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 GPRASP1Q5JY77 1395 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 WASLO00401 505 aaPredicted RBP29.3■■■□□ 2.28
SERF1A-201ENST00000317633 PLEKHG5O94827 1062 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 CCDC125Q86Z20 511 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 NWD2Q9ULI1 1742 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 TULP4Q9NRJ4 1543 aa29.3■■■□□ 2.28
SERF1A-201ENST00000317633 GLI3P10071 1580 aa29.29■■■□□ 2.28
SERF1A-201ENST00000317633 PLCH1Q4KWH8 1693 aa29.28■■■□□ 2.28
SERF1A-201ENST00000317633 ARHGEF28Q8N1W1 1705 aaKnown RBP29.26■■■□□ 2.27
SERF1A-201ENST00000317633 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
SERF1A-201ENST00000317633 VPS72Q15906 364 aa29.26■■■□□ 2.27
SERF1A-201ENST00000317633 PRR36Q9H6K5 1346 aa29.24■■■□□ 2.27
SERF1A-201ENST00000317633 ITSN1Q15811 1721 aa29.23■■■□□ 2.27
SERF1A-201ENST00000317633 NGDNQ8NEJ9 315 aaKnown RBP29.23■■■□□ 2.27
SERF1A-201ENST00000317633 ALS2Q96Q42 1657 aa29.22■■■□□ 2.27
SERF1A-201ENST00000317633 CCDC9Q9Y3X0 531 aaKnown RBP29.22■■■□□ 2.27
SERF1A-201ENST00000317633 BRWD3Q6RI45 1802 aa29.2■■■□□ 2.27
SERF1A-201ENST00000317633 KIAA1210Q9ULL0 1709 aa29.2■■■□□ 2.26
SERF1A-201ENST00000317633 FAM83GA6ND36 823 aa29.19■■■□□ 2.26
SERF1A-201ENST00000317633 SEPT12Q8IYM1 358 aa29.18■■■□□ 2.26
SERF1A-201ENST00000317633 EP400Q96L91 3159 aa29.16■■■□□ 2.26
SERF1A-201ENST00000317633 PAK3O75914 559 aaPredicted RBP29.16■■■□□ 2.26
SERF1A-201ENST00000317633 NUDT16Q96DE0 195 aaKnown RBP29.16■■■□□ 2.26
SERF1A-201ENST00000317633 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
SERF1A-201ENST00000317633 COL14A1Q05707 1796 aaKnown RBP29.16■■■□□ 2.26
SERF1A-201ENST00000317633 ONECUT3O60422 494 aaPredicted RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms