RNA–Protein interactions for RNA: ENST00000311437.10

ZNF490-201, Transcript of zinc finger protein 490, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF490, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-201ENST00000311437 CCDC94Q9BW85 323 aaPredicted RBP8.37□□□□□ -1.07
ZNF490-201ENST00000311437 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
ZNF490-201ENST00000311437 MPHOSPH9Q99550 1183 aa8.36□□□□□ -1.07
ZNF490-201ENST00000311437 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
ZNF490-201ENST00000311437 U2SURPO15042 1029 aaKnown RBP8.36□□□□□ -1.07
ZNF490-201ENST00000311437 IGSF3O75054 1194 aa8.36□□□□□ -1.07
ZNF490-201ENST00000311437 ZNF518AQ6AHZ1 1483 aa8.36□□□□□ -1.07
ZNF490-201ENST00000311437 NUCB2P80303 420 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 SF3B2Q13435 895 aaKnown RBP8.35□□□□□ -1.07
ZNF490-201ENST00000311437 ATP10AO60312 1499 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 PRXQ9BXM0 1461 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 TROQ12816 1431 aaPredicted RBP8.35□□□□□ -1.07
ZNF490-201ENST00000311437 SRPK2P78362 688 aaKnown RBP8.35□□□□□ -1.07
ZNF490-201ENST00000311437 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 TBC1D2Q9BYX2 928 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
ZNF490-201ENST00000311437 TSPYL1Q9H0U9 437 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 CALCOCO1Q9P1Z2 691 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 STK26Q9P289 416 aa8.35□□□□□ -1.07
ZNF490-201ENST00000311437 SAFB2Q14151 953 aaKnown RBP eCLIP8.34□□□□□ -1.07
ZNF490-201ENST00000311437 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
ZNF490-201ENST00000311437 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
ZNF490-201ENST00000311437 DIP2BQ9P265 1576 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 TMF1P82094 1093 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 NOM1Q5C9Z4 860 aaKnown RBP8.34□□□□□ -1.07
ZNF490-201ENST00000311437 LMTK3Q96Q04 1460 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 ITPRIPQ8IWB1 547 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 TIGD1Q96MW7 591 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 KIF16BQ96L93 1317 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 SHROOM2Q13796 1616 aa8.34□□□□□ -1.07
ZNF490-201ENST00000311437 IPO4Q8TEX9 1081 aaKnown RBP8.34□□□□□ -1.08
ZNF490-201ENST00000311437 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 ST18O60284 1047 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 ATF3P18847 181 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 ZFYVE16Q7Z3T8 1539 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
ZNF490-201ENST00000311437 TSPOAP1O95153 1857 aa8.32□□□□□ -1.08
ZNF490-201ENST00000311437 PRPF40AO75400 957 aaKnown RBP8.32□□□□□ -1.08
ZNF490-201ENST00000311437 CWC15Q9P013 229 aaKnown RBP8.32□□□□□ -1.08
ZNF490-201ENST00000311437 CIZ1Q9ULV3 898 aaPredicted RBP8.32□□□□□ -1.08
ZNF490-201ENST00000311437 KDM4FA0A1W2PPD8 638 aa8.32□□□□□ -1.08
ZNF490-201ENST00000311437 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
ZNF490-201ENST00000311437 MCM5P33992 734 aa8.32□□□□□ -1.08
ZNF490-201ENST00000311437 YEATS2Q9ULM3 1422 aa8.32□□□□□ -1.08
ZNF490-201ENST00000311437 TERF1P54274 439 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 MCCP23508 829 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 PLCH2O75038 1416 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 HSPA2P54652 639 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 SETQ01105 290 aaPredicted RBP8.31□□□□□ -1.08
ZNF490-201ENST00000311437 CFAP43Q8NDM7 1665 aa8.31□□□□□ -1.08
ZNF490-201ENST00000311437 NOL8Q76FK4 1167 aaKnown RBP8.3□□□□□ -1.08
ZNF490-201ENST00000311437 ARAP3Q8WWN8 1544 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 PANK1Q8TE04 598 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 BRD4O60885 1362 aaPredicted RBP8.3□□□□□ -1.08
ZNF490-201ENST00000311437 HMGB2P26583 209 aaKnown RBP8.3□□□□□ -1.08
ZNF490-201ENST00000311437 C20orf194Q5TEA3 1177 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 PDZRN3Q9UPQ7 1066 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 ST20-MTHFSA0A0A6YYL1 179 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 FAM135AQ9P2D6 1515 aa8.3□□□□□ -1.08
ZNF490-201ENST00000311437 KIF14Q15058 1648 aa8.29□□□□□ -1.08
ZNF490-201ENST00000311437 MBD3O95983 291 aa8.29□□□□□ -1.08
ZNF490-201ENST00000311437 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
ZNF490-201ENST00000311437 TNPO1Q92973 898 aaKnown RBP8.29□□□□□ -1.08
ZNF490-201ENST00000311437 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
ZNF490-201ENST00000311437 NPHP1O15259 732 aa8.29□□□□□ -1.08
ZNF490-201ENST00000311437 SOX12O15370 315 aa8.29□□□□□ -1.08
ZNF490-201ENST00000311437 ZKSCAN5Q9Y2L8 839 aa8.29□□□□□ -1.08
ZNF490-201ENST00000311437 IPO8O15397 1037 aaKnown RBP8.28□□□□□ -1.08
ZNF490-201ENST00000311437 CALRP27797 417 aaKnown RBP8.28□□□□□ -1.08
ZNF490-201ENST00000311437 DMTNQ08495 405 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 CCDC112Q8NEF3 446 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 DEF6Q9H4E7 631 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 TRAPPC8Q9Y2L5 1435 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 TPM3P06753 285 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 ARGLU1Q9NWB6 273 aaPredicted RBP8.28□□□□□ -1.08
ZNF490-201ENST00000311437 ATP10BO94823 1461 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
ZNF490-201ENST00000311437 USP47Q96K76 1375 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 PTPRKQ15262 1439 aa8.28□□□□□ -1.08
ZNF490-201ENST00000311437 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.08
ZNF490-201ENST00000311437 APAF1O14727 1248 aa8.27□□□□□ -1.08
ZNF490-201ENST00000311437 UTP14CQ5TAP6 766 aaKnown RBP8.27□□□□□ -1.08
ZNF490-201ENST00000311437 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.08
ZNF490-201ENST00000311437 SMC4Q9NTJ3 1288 aa8.27□□□□□ -1.08
ZNF490-201ENST00000311437 APBB1O00213 710 aa8.27□□□□□ -1.09
ZNF490-201ENST00000311437 GPATCH11Q8N954 259 aa8.27□□□□□ -1.09
ZNF490-201ENST00000311437 EIF3AQ14152 1382 aaKnown RBP8.27□□□□□ -1.09
ZNF490-201ENST00000311437 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
ZNF490-201ENST00000311437 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
ZNF490-201ENST00000311437 KIF21BO75037 1637 aa8.27□□□□□ -1.09
ZNF490-201ENST00000311437 TPD52L1Q16890 204 aaPredicted RBP8.27□□□□□ -1.09
ZNF490-201ENST00000311437 HS1BP3Q53T59 392 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms