RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NEFMP07197 916 aa19.62■□□□□ 0.73
CSDC2-201ENST00000306149 MTHFSP49914 203 aa19.62■□□□□ 0.73
CSDC2-201ENST00000306149 FRAT1Q92837 279 aaPredicted RBP19.62■□□□□ 0.73
CSDC2-201ENST00000306149 CANXP27824 592 aaKnown RBP19.62■□□□□ 0.73
CSDC2-201ENST00000306149 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
CSDC2-201ENST00000306149 TCP11L2Q8N4U5 519 aa19.61■□□□□ 0.73
CSDC2-201ENST00000306149 COG6Q9Y2V7 657 aa19.61■□□□□ 0.73
CSDC2-201ENST00000306149 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
CSDC2-201ENST00000306149 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
CSDC2-201ENST00000306149 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
CSDC2-201ENST00000306149 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
CSDC2-201ENST00000306149 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
CSDC2-201ENST00000306149 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
CSDC2-201ENST00000306149 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
CSDC2-201ENST00000306149 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
CSDC2-201ENST00000306149 RUNDC1Q96C34 613 aa19.58■□□□□ 0.73
CSDC2-201ENST00000306149 QRICH2Q9H0J4 1663 aa19.58■□□□□ 0.72
CSDC2-201ENST00000306149 STK26Q9P289 416 aa19.58■□□□□ 0.72
CSDC2-201ENST00000306149 ADGRB1O14514 1584 aa19.58■□□□□ 0.72
CSDC2-201ENST00000306149 TNNQ9UQP3 1299 aa19.57■□□□□ 0.72
CSDC2-201ENST00000306149 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
CSDC2-201ENST00000306149 PPLO60437 1756 aa19.57■□□□□ 0.72
CSDC2-201ENST00000306149 CGNL1Q0VF96 1302 aa19.56■□□□□ 0.72
CSDC2-201ENST00000306149 SHPRHQ149N8 1683 aa19.55■□□□□ 0.72
CSDC2-201ENST00000306149 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
CSDC2-201ENST00000306149 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
CSDC2-201ENST00000306149 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
CSDC2-201ENST00000306149 RPGRIP1LQ68CZ1 1315 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
CSDC2-201ENST00000306149 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
CSDC2-201ENST00000306149 IDI1Q13907 227 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 ABCC3O15438 1527 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 EVC2Q86UK5 1308 aa19.53■□□□□ 0.72
CSDC2-201ENST00000306149 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
CSDC2-201ENST00000306149 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
CSDC2-201ENST00000306149 RLBP1P12271 317 aa19.51■□□□□ 0.71
CSDC2-201ENST00000306149 CFAP53Q96M91 514 aa19.51■□□□□ 0.71
CSDC2-201ENST00000306149 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
CSDC2-201ENST00000306149 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
CSDC2-201ENST00000306149 HECW2Q9P2P5 1572 aa19.51■□□□□ 0.71
CSDC2-201ENST00000306149 NINLQ9Y2I6 1382 aa19.5■□□□□ 0.71
CSDC2-201ENST00000306149 SIGLEC1Q9BZZ2 1709 aa19.5■□□□□ 0.71
CSDC2-201ENST00000306149 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
CSDC2-201ENST00000306149 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
CSDC2-201ENST00000306149 GLI2P10070 1586 aa19.48■□□□□ 0.71
CSDC2-201ENST00000306149 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
CSDC2-201ENST00000306149 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
CSDC2-201ENST00000306149 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
CSDC2-201ENST00000306149 U2SURPO15042 1029 aaKnown RBP19.46■□□□□ 0.71
CSDC2-201ENST00000306149 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
CSDC2-201ENST00000306149 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
CSDC2-201ENST00000306149 SEC24BO95487 1268 aa19.46■□□□□ 0.71
CSDC2-201ENST00000306149 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
CSDC2-201ENST00000306149 IQSEC2Q5JU85 1478 aa19.46■□□□□ 0.71
CSDC2-201ENST00000306149 TSR2Q969E8 191 aaKnown RBP19.45■□□□□ 0.7
CSDC2-201ENST00000306149 CAMSAP1Q5T5Y3 1602 aa19.45■□□□□ 0.7
CSDC2-201ENST00000306149 NEXMIFQ5QGS0 1516 aa19.44■□□□□ 0.7
CSDC2-201ENST00000306149 NFKBIBQ15653 356 aa19.44■□□□□ 0.7
CSDC2-201ENST00000306149 A0A1W2PP64 1363 aa19.43■□□□□ 0.7
CSDC2-201ENST00000306149 CFAP74Q9C0B2 1584 aa19.43■□□□□ 0.7
CSDC2-201ENST00000306149 ARHGEF28Q8N1W1 1705 aaKnown RBP19.43■□□□□ 0.7
CSDC2-201ENST00000306149 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
CSDC2-201ENST00000306149 FBXO31Q5XUX0 539 aaPredicted RBP19.41■□□□□ 0.7
CSDC2-201ENST00000306149 YEATS2Q9ULM3 1422 aa19.41■□□□□ 0.7
CSDC2-201ENST00000306149 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
CSDC2-201ENST00000306149 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
CSDC2-201ENST00000306149 POGKQ9P215 609 aa19.4■□□□□ 0.7
CSDC2-201ENST00000306149 USP19O94966 1318 aa19.4■□□□□ 0.7
CSDC2-201ENST00000306149 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
CSDC2-201ENST00000306149 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
CSDC2-201ENST00000306149 DIP2CQ9Y2E4 1556 aa19.38■□□□□ 0.69
CSDC2-201ENST00000306149 FYB1O15117 783 aa19.38■□□□□ 0.69
CSDC2-201ENST00000306149 FBLN1P23142 703 aa19.37■□□□□ 0.69
CSDC2-201ENST00000306149 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
CSDC2-201ENST00000306149 SLC52A1Q9NWF4 448 aa19.37■□□□□ 0.69
CSDC2-201ENST00000306149 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
CSDC2-201ENST00000306149 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
CSDC2-201ENST00000306149 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
CSDC2-201ENST00000306149 NSD2O96028 1365 aa19.36■□□□□ 0.69
CSDC2-201ENST00000306149 MYO5BQ9ULV0 1848 aa19.36■□□□□ 0.69
CSDC2-201ENST00000306149 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
CSDC2-201ENST00000306149 ABCC11Q96J66 1382 aa19.36■□□□□ 0.69
CSDC2-201ENST00000306149 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
CSDC2-201ENST00000306149 NEO1Q92859 1461 aa19.35■□□□□ 0.69
CSDC2-201ENST00000306149 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
CSDC2-201ENST00000306149 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
CSDC2-201ENST00000306149 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
CSDC2-201ENST00000306149 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.69
CSDC2-201ENST00000306149 AAMPQ13685 434 aa19.33■□□□□ 0.69
CSDC2-201ENST00000306149 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.69
CSDC2-201ENST00000306149 MVPQ14764 893 aaKnown RBP19.33■□□□□ 0.68
CSDC2-201ENST00000306149 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.68
CSDC2-201ENST00000306149 CABP1Q9NZU7 370 aa19.33■□□□□ 0.68
CSDC2-201ENST00000306149 STAG3Q9UJ98 1225 aa19.33■□□□□ 0.68
CSDC2-201ENST00000306149 ADGRB2O60241 1585 aa19.33■□□□□ 0.68
CSDC2-201ENST00000306149 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
CSDC2-201ENST00000306149 GSE1Q14687 1217 aa19.32■□□□□ 0.68
CSDC2-201ENST00000306149 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms