RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.99
LONRF3-201ENST00000304778 TMEM131LA2VDJ0 1609 aa21.2■□□□□ 0.98
LONRF3-201ENST00000304778 QRICH2Q9H0J4 1663 aa21.2■□□□□ 0.98
LONRF3-201ENST00000304778 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
LONRF3-201ENST00000304778 MYO5BQ9ULV0 1848 aa21.2■□□□□ 0.98
LONRF3-201ENST00000304778 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
LONRF3-201ENST00000304778 CARD14Q9BXL6 1004 aa21.19■□□□□ 0.98
LONRF3-201ENST00000304778 NPC1L1Q9UHC9 1359 aa21.19■□□□□ 0.98
LONRF3-201ENST00000304778 EIF5BO60841 1220 aaKnown RBP21.18■□□□□ 0.98
LONRF3-201ENST00000304778 ZFYVE9O95405 1425 aa21.18■□□□□ 0.98
LONRF3-201ENST00000304778 MLECQ14165 292 aa21.18■□□□□ 0.98
LONRF3-201ENST00000304778 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
LONRF3-201ENST00000304778 CLTCQ00610 1675 aaKnown RBP21.16■□□□□ 0.98
LONRF3-201ENST00000304778 BRPF3Q9ULD4 1205 aa21.15■□□□□ 0.98
LONRF3-201ENST00000304778 USP35Q9P2H5 1018 aa21.15■□□□□ 0.98
LONRF3-201ENST00000304778 ADAMTS8Q9UP79 889 aa21.14■□□□□ 0.97
LONRF3-201ENST00000304778 PLIN1O60240 522 aa21.13■□□□□ 0.97
LONRF3-201ENST00000304778 ARHGEF28Q8N1W1 1705 aaKnown RBP21.13■□□□□ 0.97
LONRF3-201ENST00000304778 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 MS4A1P11836 297 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 PDE4AP27815 886 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 STK26Q9P289 416 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 ARHGEF40Q8TER5 1519 aa21.12■□□□□ 0.97
LONRF3-201ENST00000304778 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
LONRF3-201ENST00000304778 WDR43Q15061 677 aaKnown RBP eCLIP21.09■□□□□ 0.97
LONRF3-201ENST00000304778 SLC4A3P48751 1232 aa21.09■□□□□ 0.97
LONRF3-201ENST00000304778 CRBNQ96SW2 442 aa21.09■□□□□ 0.97
LONRF3-201ENST00000304778 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
LONRF3-201ENST00000304778 PLEKHH1Q9ULM0 1364 aa21.08■□□□□ 0.96
LONRF3-201ENST00000304778 TULP4Q9NRJ4 1543 aa21.08■□□□□ 0.96
LONRF3-201ENST00000304778 NSD3Q9BZ95 1437 aa21.07■□□□□ 0.96
LONRF3-201ENST00000304778 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
LONRF3-201ENST00000304778 SPATA31D1Q6ZQQ2 1576 aa21.07■□□□□ 0.96
LONRF3-201ENST00000304778 ZNF521Q96K83 1311 aa21.05■□□□□ 0.96
LONRF3-201ENST00000304778 PUS7Q96PZ0 661 aaKnown RBP21.05■□□□□ 0.96
LONRF3-201ENST00000304778 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
LONRF3-201ENST00000304778 A2ML1A8K2U0 1454 aa21.04■□□□□ 0.96
LONRF3-201ENST00000304778 PPM1GO15355 546 aaPredicted RBP21.03■□□□□ 0.96
LONRF3-201ENST00000304778 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
LONRF3-201ENST00000304778 ALKQ9UM73 1620 aa21.03■□□□□ 0.96
LONRF3-201ENST00000304778 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
LONRF3-201ENST00000304778 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
LONRF3-201ENST00000304778 PTPRMP28827 1452 aa21.02■□□□□ 0.96
LONRF3-201ENST00000304778 PRAM1Q96QH2 718 aa21.01■□□□□ 0.95
LONRF3-201ENST00000304778 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
LONRF3-201ENST00000304778 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
LONRF3-201ENST00000304778 MORC1Q86VD1 984 aa21■□□□□ 0.95
LONRF3-201ENST00000304778 GOLGA2Q08379 1002 aa21■□□□□ 0.95
LONRF3-201ENST00000304778 GSE1Q14687 1217 aa20.99■□□□□ 0.95
LONRF3-201ENST00000304778 POGKQ9P215 609 aa20.99■□□□□ 0.95
LONRF3-201ENST00000304778 RIMS2Q9UQ26 1411 aa20.99■□□□□ 0.95
LONRF3-201ENST00000304778 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
LONRF3-201ENST00000304778 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
LONRF3-201ENST00000304778 SRPK2P78362 688 aaKnown RBP20.98■□□□□ 0.95
LONRF3-201ENST00000304778 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
LONRF3-201ENST00000304778 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
LONRF3-201ENST00000304778 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
LONRF3-201ENST00000304778 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
LONRF3-201ENST00000304778 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
LONRF3-201ENST00000304778 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
LONRF3-201ENST00000304778 USP32Q8NFA0 1604 aa20.95■□□□□ 0.94
LONRF3-201ENST00000304778 SLFN5Q08AF3 891 aa20.94■□□□□ 0.94
LONRF3-201ENST00000304778 POLR3AO14802 1390 aaPredicted RBP20.94■□□□□ 0.94
LONRF3-201ENST00000304778 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.94■□□□□ 0.94
LONRF3-201ENST00000304778 CENPQQ7L2Z9 268 aaPredicted RBP20.93■□□□□ 0.94
LONRF3-201ENST00000304778 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
LONRF3-201ENST00000304778 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
LONRF3-201ENST00000304778 NKTRP30414 1462 aaKnown RBP20.91■□□□□ 0.94
LONRF3-201ENST00000304778 APAF1O14727 1248 aa20.9■□□□□ 0.94
LONRF3-201ENST00000304778 NINLQ9Y2I6 1382 aa20.9■□□□□ 0.94
LONRF3-201ENST00000304778 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
LONRF3-201ENST00000304778 ATAD2Q6PL18 1390 aa20.9■□□□□ 0.94
LONRF3-201ENST00000304778 CDK19Q9BWU1 502 aa20.89■□□□□ 0.94
LONRF3-201ENST00000304778 WAPLQ7Z5K2 1190 aa20.89■□□□□ 0.93
LONRF3-201ENST00000304778 TNRQ92752 1358 aa20.89■□□□□ 0.93
LONRF3-201ENST00000304778 SETD1AO15047 1707 aaKnown RBP20.88■□□□□ 0.93
LONRF3-201ENST00000304778 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.88■□□□□ 0.93
LONRF3-201ENST00000304778 MTHFSP49914 203 aa20.88■□□□□ 0.93
LONRF3-201ENST00000304778 NSD2O96028 1365 aa20.88■□□□□ 0.93
LONRF3-201ENST00000304778 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
LONRF3-201ENST00000304778 DDRGK1Q96HY6 314 aa20.86■□□□□ 0.93
LONRF3-201ENST00000304778 PKNOX2Q96KN3 472 aa20.86■□□□□ 0.93
LONRF3-201ENST00000304778 DLC1Q96QB1 1528 aa20.86■□□□□ 0.93
LONRF3-201ENST00000304778 ABCC11Q96J66 1382 aa20.86■□□□□ 0.93
LONRF3-201ENST00000304778 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
LONRF3-201ENST00000304778 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
LONRF3-201ENST00000304778 NGEFQ8N5V2 710 aa20.85■□□□□ 0.93
LONRF3-201ENST00000304778 SPINK5Q9NQ38 1064 aaPredicted RBP20.85■□□□□ 0.93
LONRF3-201ENST00000304778 TERF2IPQ9NYB0 399 aa20.85■□□□□ 0.93
LONRF3-201ENST00000304778 SHPRHQ149N8 1683 aa20.85■□□□□ 0.93
LONRF3-201ENST00000304778 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
LONRF3-201ENST00000304778 METP08581 1390 aa20.84■□□□□ 0.93
LONRF3-201ENST00000304778 E9PSI1 815 aa20.84■□□□□ 0.93
LONRF3-201ENST00000304778 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.92
LONRF3-201ENST00000304778 CABP1Q9NZU7 370 aa20.83■□□□□ 0.92
LONRF3-201ENST00000304778 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
LONRF3-201ENST00000304778 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
LONRF3-201ENST00000304778 FYB1O15117 783 aa20.8■□□□□ 0.92
LONRF3-201ENST00000304778 CEBPAP49715 358 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms