RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
KARS-201ENST00000302445 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
KARS-201ENST00000302445 ATF5Q9Y2D1 282 aaPredicted RBP17.59■□□□□ 0.41
KARS-201ENST00000302445 KANK1Q14678 1352 aa17.59■□□□□ 0.41
KARS-201ENST00000302445 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
KARS-201ENST00000302445 IQSEC2Q5JU85 1478 aa17.58■□□□□ 0.4
KARS-201ENST00000302445 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
KARS-201ENST00000302445 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.4
KARS-201ENST00000302445 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
KARS-201ENST00000302445 NAP1L5Q96NT1 182 aaPredicted RBP17.57■□□□□ 0.4
KARS-201ENST00000302445 PTMSP20962 102 aa17.57■□□□□ 0.4
KARS-201ENST00000302445 HSP90AA2PQ14568 343 aaPredicted RBP17.57■□□□□ 0.4
KARS-201ENST00000302445 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
KARS-201ENST00000302445 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
KARS-201ENST00000302445 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
KARS-201ENST00000302445 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
KARS-201ENST00000302445 TRAK2O60296 914 aa17.55■□□□□ 0.4
KARS-201ENST00000302445 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
KARS-201ENST00000302445 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
KARS-201ENST00000302445 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
KARS-201ENST00000302445 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
KARS-201ENST00000302445 PANK1Q8TE04 598 aa17.53■□□□□ 0.4
KARS-201ENST00000302445 MYH16Q9H6N6 1097 aa17.53■□□□□ 0.4
KARS-201ENST00000302445 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
KARS-201ENST00000302445 PTPRTO14522 1441 aa17.53■□□□□ 0.4
KARS-201ENST00000302445 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
KARS-201ENST00000302445 WDR63Q8IWG1 891 aa17.52■□□□□ 0.4
KARS-201ENST00000302445 GRPEL1Q9HAV7 217 aa17.52■□□□□ 0.4
KARS-201ENST00000302445 TPM2P07951 284 aa17.52■□□□□ 0.39
KARS-201ENST00000302445 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.39
KARS-201ENST00000302445 SBNO2Q9Y2G9 1366 aa17.52■□□□□ 0.39
KARS-201ENST00000302445 DEPDC5O75140 1603 aa17.51■□□□□ 0.39
KARS-201ENST00000302445 CCDC27Q2M243 656 aa17.51■□□□□ 0.39
KARS-201ENST00000302445 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
KARS-201ENST00000302445 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
KARS-201ENST00000302445 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
KARS-201ENST00000302445 ESPNB1AK53 854 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 MYOM2P54296 1465 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 TET3O43151 1660 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.39
KARS-201ENST00000302445 PANK2Q9BZ23 570 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
KARS-201ENST00000302445 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
KARS-201ENST00000302445 SKOR2Q2VWA4 1001 aaPredicted RBP17.48■□□□□ 0.39
KARS-201ENST00000302445 MAP3K4Q9Y6R4 1608 aa17.48■□□□□ 0.39
KARS-201ENST00000302445 DDIT3P35638 169 aa17.48■□□□□ 0.39
KARS-201ENST00000302445 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
KARS-201ENST00000302445 SNX21Q969T3 373 aa17.48■□□□□ 0.39
KARS-201ENST00000302445 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
KARS-201ENST00000302445 ADGRB2O60241 1585 aa17.47■□□□□ 0.39
KARS-201ENST00000302445 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
KARS-201ENST00000302445 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
KARS-201ENST00000302445 ABCA6Q8N139 1617 aa17.45■□□□□ 0.38
KARS-201ENST00000302445 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
KARS-201ENST00000302445 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
KARS-201ENST00000302445 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
KARS-201ENST00000302445 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
KARS-201ENST00000302445 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
KARS-201ENST00000302445 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
KARS-201ENST00000302445 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
KARS-201ENST00000302445 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
KARS-201ENST00000302445 ZC3H13Q5T200 1668 aaKnown RBP17.43■□□□□ 0.38
KARS-201ENST00000302445 TERF1P54274 439 aa17.43■□□□□ 0.38
KARS-201ENST00000302445 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
KARS-201ENST00000302445 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
KARS-201ENST00000302445 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
KARS-201ENST00000302445 ABCC1P33527 1531 aa17.42■□□□□ 0.38
KARS-201ENST00000302445 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
KARS-201ENST00000302445 RLBP1P12271 317 aa17.42■□□□□ 0.38
KARS-201ENST00000302445 GZF1Q9H116 711 aaPredicted RBP17.42■□□□□ 0.38
KARS-201ENST00000302445 VWDEQ8N2E2 1590 aa17.41■□□□□ 0.38
KARS-201ENST00000302445 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
KARS-201ENST00000302445 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
KARS-201ENST00000302445 PDCL3Q9H2J4 239 aa17.4■□□□□ 0.38
KARS-201ENST00000302445 CCDC173Q0VFZ6 552 aa17.4■□□□□ 0.38
KARS-201ENST00000302445 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
KARS-201ENST00000302445 KIF1BO60333 1816 aa17.39■□□□□ 0.37
KARS-201ENST00000302445 PPP1R9BQ96SB3 815 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 ERBB4Q15303 1308 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 CFAP74Q9C0B2 1584 aa17.38■□□□□ 0.37
KARS-201ENST00000302445 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
KARS-201ENST00000302445 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
KARS-201ENST00000302445 CLEC17AQ6ZS10 378 aa17.37■□□□□ 0.37
KARS-201ENST00000302445 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
KARS-201ENST00000302445 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
KARS-201ENST00000302445 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
KARS-201ENST00000302445 ARAP3Q8WWN8 1544 aa17.36■□□□□ 0.37
KARS-201ENST00000302445 ARXQ96QS3 562 aa17.35■□□□□ 0.37
KARS-201ENST00000302445 TNPO1Q92973 898 aaKnown RBP17.35■□□□□ 0.37
KARS-201ENST00000302445 NSD2O96028 1365 aa17.35■□□□□ 0.37
KARS-201ENST00000302445 PLCH2O75038 1416 aa17.35■□□□□ 0.37
KARS-201ENST00000302445 HS1BP3Q53T59 392 aa17.34■□□□□ 0.37
KARS-201ENST00000302445 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
KARS-201ENST00000302445 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms