RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 AMER1Q5JTC6 1135 aaPredicted RBP29.75■■■□□ 2.35
NHLH1-201ENST00000302101 TXNDC2Q86VQ3 553 aa29.75■■■□□ 2.35
NHLH1-201ENST00000302101 BRD4O60885 1362 aaPredicted RBP29.75■■■□□ 2.35
NHLH1-201ENST00000302101 MINK1Q8N4C8 1332 aaPredicted RBP29.75■■■□□ 2.35
NHLH1-201ENST00000302101 SLC12A5Q9H2X9 1139 aa29.74■■■□□ 2.35
NHLH1-201ENST00000302101 ADAMTSL3P82987 1691 aa29.73■■■□□ 2.35
NHLH1-201ENST00000302101 NLRP13Q86W25 1043 aa29.73■■■□□ 2.35
NHLH1-201ENST00000302101 PUS7Q96PZ0 661 aaKnown RBP29.73■■■□□ 2.35
NHLH1-201ENST00000302101 CABP2Q9NPB3 220 aa29.73■■■□□ 2.35
NHLH1-201ENST00000302101 EID1Q9Y6B2 187 aa29.72■■■□□ 2.35
NHLH1-201ENST00000302101 CARD14Q9BXL6 1004 aa29.72■■■□□ 2.35
NHLH1-201ENST00000302101 ABCC11Q96J66 1382 aa29.72■■■□□ 2.35
NHLH1-201ENST00000302101 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
NHLH1-201ENST00000302101 THEMISQ8N1K5 641 aaPredicted RBP29.71■■■□□ 2.35
NHLH1-201ENST00000302101 WAPLQ7Z5K2 1190 aa29.7■■■□□ 2.35
NHLH1-201ENST00000302101 SLIT1O75093 1534 aa29.7■■■□□ 2.34
NHLH1-201ENST00000302101 PLEKHG1Q9ULL1 1385 aa29.7■■■□□ 2.34
NHLH1-201ENST00000302101 SRPK2P78362 688 aaKnown RBP29.69■■■□□ 2.34
NHLH1-201ENST00000302101 PNISRQ8TF01 805 aaKnown RBP29.69■■■□□ 2.34
NHLH1-201ENST00000302101 ZBED9Q6R2W3 1325 aa29.68■■■□□ 2.34
NHLH1-201ENST00000302101 ARHGAP23Q9P227 1491 aa29.68■■■□□ 2.34
NHLH1-201ENST00000302101 ADAMTS13Q76LX8 1427 aa29.67■■■□□ 2.34
NHLH1-201ENST00000302101 PLEKHH1Q9ULM0 1364 aa29.66■■■□□ 2.34
NHLH1-201ENST00000302101 NPC1L1Q9UHC9 1359 aa29.66■■■□□ 2.34
NHLH1-201ENST00000302101 CEP170BQ9Y4F5 1589 aaPredicted RBP29.64■■■□□ 2.34
NHLH1-201ENST00000302101 KNDC1Q76NI1 1749 aa29.62■■■□□ 2.33
NHLH1-201ENST00000302101 ERICH6BQ5W0A0 696 aa29.61■■■□□ 2.33
NHLH1-201ENST00000302101 SLC26A8Q96RN1 970 aa29.61■■■□□ 2.33
NHLH1-201ENST00000302101 CDK19Q9BWU1 502 aa29.61■■■□□ 2.33
NHLH1-201ENST00000302101 NSD3Q9BZ95 1437 aa29.61■■■□□ 2.33
NHLH1-201ENST00000302101 PPP4R2Q9NY27 417 aa29.59■■■□□ 2.33
NHLH1-201ENST00000302101 TECPR2O15040 1411 aa29.59■■■□□ 2.33
NHLH1-201ENST00000302101 PPP2R1AP30153 589 aa29.59■■■□□ 2.33
NHLH1-201ENST00000302101 ATAD2Q6PL18 1390 aa29.58■■■□□ 2.33
NHLH1-201ENST00000302101 MED14O60244 1454 aa29.57■■■□□ 2.32
NHLH1-201ENST00000302101 ANKRD36BQ8N2N9 1353 aa29.57■■■□□ 2.32
NHLH1-201ENST00000302101 CPS1P31327 1500 aa29.56■■■□□ 2.32
NHLH1-201ENST00000302101 SIRT1Q96EB6 747 aa29.56■■■□□ 2.32
NHLH1-201ENST00000302101 FAM135BQ49AJ0 1406 aa29.56■■■□□ 2.32
NHLH1-201ENST00000302101 SETD1BQ9UPS6 1966 aaKnown RBP29.56■■■□□ 2.32
NHLH1-201ENST00000302101 NINLQ9Y2I6 1382 aa29.55■■■□□ 2.32
NHLH1-201ENST00000302101 TBX22Q9Y458 520 aa29.52■■■□□ 2.32
NHLH1-201ENST00000302101 ROBO2Q9HCK4 1378 aa29.51■■■□□ 2.32
NHLH1-201ENST00000302101 ZNF142P52746 1687 aaPredicted RBP29.51■■■□□ 2.31
NHLH1-201ENST00000302101 A0A1W2PP64 1363 aa29.5■■■□□ 2.31
NHLH1-201ENST00000302101 USP32Q8NFA0 1604 aa29.49■■■□□ 2.31
NHLH1-201ENST00000302101 CGNL1Q0VF96 1302 aa29.49■■■□□ 2.31
NHLH1-201ENST00000302101 PTPRUQ92729 1446 aa29.49■■■□□ 2.31
NHLH1-201ENST00000302101 WASLO00401 505 aaPredicted RBP29.49■■■□□ 2.31
NHLH1-201ENST00000302101 CABP1Q9NZU7 370 aa29.48■■■□□ 2.31
NHLH1-201ENST00000302101 TERF2IPQ9NYB0 399 aa29.47■■■□□ 2.31
NHLH1-201ENST00000302101 B4GALNT3Q6L9W6 998 aa29.47■■■□□ 2.31
NHLH1-201ENST00000302101 MSH5O43196 834 aa29.46■■■□□ 2.31
NHLH1-201ENST00000302101 AMOTL2Q9Y2J4 779 aa29.46■■■□□ 2.31
NHLH1-201ENST00000302101 MORC1Q86VD1 984 aa29.45■■■□□ 2.31
NHLH1-201ENST00000302101 DIP2AQ14689 1571 aa29.45■■■□□ 2.3
NHLH1-201ENST00000302101 CD163L1Q9NR16 1453 aa29.45■■■□□ 2.3
NHLH1-201ENST00000302101 SENP3-EIF4A1A0A087X0R7 540 aa29.44■■■□□ 2.3
NHLH1-201ENST00000302101 ANKLE2Q86XL3 938 aa29.44■■■□□ 2.3
NHLH1-201ENST00000302101 FANCIQ9NVI1 1328 aa29.42■■■□□ 2.3
NHLH1-201ENST00000302101 HDGFL2Q7Z4V5 671 aaPredicted RBP29.41■■■□□ 2.3
NHLH1-201ENST00000302101 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.41■■■□□ 2.3
NHLH1-201ENST00000302101 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
NHLH1-201ENST00000302101 SMG6Q86US8 1419 aaKnown RBP29.38■■■□□ 2.29
NHLH1-201ENST00000302101 NSD2O96028 1365 aa29.38■■■□□ 2.29
NHLH1-201ENST00000302101 NUDT16Q96DE0 195 aaKnown RBP29.37■■■□□ 2.29
NHLH1-201ENST00000302101 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
NHLH1-201ENST00000302101 WDR43Q15061 677 aaKnown RBP eCLIP29.35■■■□□ 2.29
NHLH1-201ENST00000302101 ADAMTS8Q9UP79 889 aa29.35■■■□□ 2.29
NHLH1-201ENST00000302101 ATP7BP35670 1465 aa29.34■■■□□ 2.29
NHLH1-201ENST00000302101 PTCH1Q13635 1447 aa29.34■■■□□ 2.29
NHLH1-201ENST00000302101 ADGRB2O60241 1585 aa29.34■■■□□ 2.29
NHLH1-201ENST00000302101 CCDC61Q9Y6R9 512 aa29.33■■■□□ 2.29
NHLH1-201ENST00000302101 NCKAP5LQ9HCH0 1330 aa29.33■■■□□ 2.29
NHLH1-201ENST00000302101 NUDCQ9Y266 331 aa29.33■■■□□ 2.29
NHLH1-201ENST00000302101 GGNBP2Q9H3C7 697 aa29.32■■■□□ 2.28
NHLH1-201ENST00000302101 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
NHLH1-201ENST00000302101 FYB1O15117 783 aa29.31■■■□□ 2.28
NHLH1-201ENST00000302101 INSRP06213 1382 aa29.31■■■□□ 2.28
NHLH1-201ENST00000302101 PIK3R4Q99570 1358 aa29.31■■■□□ 2.28
NHLH1-201ENST00000302101 BLMP54132 1417 aaPredicted RBP29.31■■■□□ 2.28
NHLH1-201ENST00000302101 PRR36Q9H6K5 1346 aa29.3■■■□□ 2.28
NHLH1-201ENST00000302101 KCNA6P17658 529 aa29.29■■■□□ 2.28
NHLH1-201ENST00000302101 NUTM2FA1L443 756 aa29.27■■■□□ 2.28
NHLH1-201ENST00000302101 SALL2Q9Y467 1007 aaPredicted RBP29.27■■■□□ 2.28
NHLH1-201ENST00000302101 POLR3AO14802 1390 aaPredicted RBP29.27■■■□□ 2.28
NHLH1-201ENST00000302101 ANKRD26Q9UPS8 1709 aa29.27■■■□□ 2.28
NHLH1-201ENST00000302101 CPSF1Q10570 1443 aaKnown RBP29.27■■■□□ 2.28
NHLH1-201ENST00000302101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.26■■■□□ 2.28
NHLH1-201ENST00000302101 KIF20BQ96Q89 1820 aa29.26■■■□□ 2.27
NHLH1-201ENST00000302101 MTHFSP49914 203 aa29.25■■■□□ 2.27
NHLH1-201ENST00000302101 ERICH6Q7L0X2 663 aa29.25■■■□□ 2.27
NHLH1-201ENST00000302101 CHD2O14647 1828 aaKnown RBP29.25■■■□□ 2.27
NHLH1-201ENST00000302101 CDC42BPGQ6DT37 1551 aa29.24■■■□□ 2.27
NHLH1-201ENST00000302101 NPHP4O75161 1426 aaPredicted RBP29.22■■■□□ 2.27
NHLH1-201ENST00000302101 ITSN1Q15811 1721 aa29.22■■■□□ 2.27
NHLH1-201ENST00000302101 AKAP12Q02952 1782 aa29.2■■■□□ 2.27
NHLH1-201ENST00000302101 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.26
NHLH1-201ENST00000302101 TOPAZ1Q8N9V7 1692 aa29.19■■■□□ 2.26
NHLH1-201ENST00000302101 MON2Q7Z3U7 1717 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms