RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
DDB1-201ENST00000301764 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
DDB1-201ENST00000301764 WDR63Q8IWG1 891 aa18.6■□□□□ 0.57
DDB1-201ENST00000301764 RRAGDQ9NQL2 400 aaPredicted RBP18.6■□□□□ 0.57
DDB1-201ENST00000301764 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
DDB1-201ENST00000301764 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
DDB1-201ENST00000301764 BECN2A8MW95 431 aa18.59■□□□□ 0.57
DDB1-201ENST00000301764 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
DDB1-201ENST00000301764 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
DDB1-201ENST00000301764 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
DDB1-201ENST00000301764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.59■□□□□ 0.57
DDB1-201ENST00000301764 XPCQ01831 940 aaPredicted RBP18.59■□□□□ 0.57
DDB1-201ENST00000301764 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
DDB1-201ENST00000301764 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
DDB1-201ENST00000301764 PODXL2Q9NZ53 605 aa18.58■□□□□ 0.56
DDB1-201ENST00000301764 HMGN5P82970 282 aaKnown RBP18.58■□□□□ 0.56
DDB1-201ENST00000301764 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
DDB1-201ENST00000301764 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
DDB1-201ENST00000301764 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
DDB1-201ENST00000301764 CDK13Q14004 1512 aaKnown RBP18.57■□□□□ 0.56
DDB1-201ENST00000301764 SEC24BO95487 1268 aa18.57■□□□□ 0.56
DDB1-201ENST00000301764 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
DDB1-201ENST00000301764 SSFA2P28290 1259 aa18.57■□□□□ 0.56
DDB1-201ENST00000301764 GNAI1P63096 354 aa18.56■□□□□ 0.56
DDB1-201ENST00000301764 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
DDB1-201ENST00000301764 SMC3Q9UQE7 1217 aa18.56■□□□□ 0.56
DDB1-201ENST00000301764 STAC3Q96MF2 364 aa18.56■□□□□ 0.56
DDB1-201ENST00000301764 ABCC5O15440 1437 aa18.56■□□□□ 0.56
DDB1-201ENST00000301764 TMEM57Q8N5G2 664 aa18.55■□□□□ 0.56
DDB1-201ENST00000301764 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
DDB1-201ENST00000301764 GNL2Q13823 731 aaKnown RBP18.55■□□□□ 0.56
DDB1-201ENST00000301764 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
DDB1-201ENST00000301764 SYCE3A1L190 88 aa18.54■□□□□ 0.56
DDB1-201ENST00000301764 MLECQ14165 292 aa18.54■□□□□ 0.56
DDB1-201ENST00000301764 GPATCH3Q96I76 525 aa18.54■□□□□ 0.56
DDB1-201ENST00000301764 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
DDB1-201ENST00000301764 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.54■□□□□ 0.56
DDB1-201ENST00000301764 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
DDB1-201ENST00000301764 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 NECTIN2Q92692 538 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 PTPRGP23470 1445 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 TPM4P67936 248 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 CWC22Q9HCG8 908 aaKnown RBP18.53■□□□□ 0.56
DDB1-201ENST00000301764 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
DDB1-201ENST00000301764 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
DDB1-201ENST00000301764 SPC24Q8NBT2 197 aa18.52■□□□□ 0.56
DDB1-201ENST00000301764 H3BQV1 296 aa18.52■□□□□ 0.56
DDB1-201ENST00000301764 IFFO2Q5TF58 517 aa18.52■□□□□ 0.56
DDB1-201ENST00000301764 FIBPO43427 364 aa18.52■□□□□ 0.55
DDB1-201ENST00000301764 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.55
DDB1-201ENST00000301764 SF3A1Q15459 793 aaKnown RBP18.51■□□□□ 0.55
DDB1-201ENST00000301764 PRKAR2BP31323 418 aa18.5■□□□□ 0.55
DDB1-201ENST00000301764 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
DDB1-201ENST00000301764 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
DDB1-201ENST00000301764 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
DDB1-201ENST00000301764 CCAR2Q8N163 923 aaKnown RBP18.49■□□□□ 0.55
DDB1-201ENST00000301764 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
DDB1-201ENST00000301764 FAM184AQ8NB25 1140 aa18.48■□□□□ 0.55
DDB1-201ENST00000301764 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
DDB1-201ENST00000301764 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
DDB1-201ENST00000301764 COG3Q96JB2 828 aa18.48■□□□□ 0.55
DDB1-201ENST00000301764 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
DDB1-201ENST00000301764 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
DDB1-201ENST00000301764 A0A0G2JS52 829 aa18.47■□□□□ 0.55
DDB1-201ENST00000301764 TRIM5Q9C035 493 aa18.47■□□□□ 0.55
DDB1-201ENST00000301764 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
DDB1-201ENST00000301764 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
DDB1-201ENST00000301764 MCM2P49736 904 aa18.46■□□□□ 0.55
DDB1-201ENST00000301764 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
DDB1-201ENST00000301764 HOMER1Q86YM7 354 aa18.45■□□□□ 0.54
DDB1-201ENST00000301764 PARD3Q8TEW0 1356 aa18.45■□□□□ 0.54
DDB1-201ENST00000301764 ERC2O15083 957 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 CBX1P83916 185 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 TRIM27P14373 513 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 RUFY2Q8WXA3 655 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 ZHX1Q9UKY1 873 aaPredicted RBP18.44■□□□□ 0.54
DDB1-201ENST00000301764 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
DDB1-201ENST00000301764 TPD52L1Q16890 204 aaPredicted RBP18.44■□□□□ 0.54
DDB1-201ENST00000301764 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 NPHP1O15259 732 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 AMPHP49418 695 aa18.44■□□□□ 0.54
DDB1-201ENST00000301764 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
DDB1-201ENST00000301764 SCAPERQ9BY12 1400 aa18.43■□□□□ 0.54
DDB1-201ENST00000301764 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
DDB1-201ENST00000301764 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
DDB1-201ENST00000301764 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
DDB1-201ENST00000301764 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
DDB1-201ENST00000301764 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
DDB1-201ENST00000301764 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
DDB1-201ENST00000301764 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
DDB1-201ENST00000301764 TPM3P06753 285 aa18.41■□□□□ 0.54
DDB1-201ENST00000301764 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
DDB1-201ENST00000301764 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
DDB1-201ENST00000301764 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
DDB1-201ENST00000301764 PDCL2Q8N4E4 241 aa18.4■□□□□ 0.54
DDB1-201ENST00000301764 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
DDB1-201ENST00000301764 WDR33Q9C0J8 1336 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms