RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
CACNB3-201ENST00000301050 PARD3Q8TEW0 1356 aa20.45■□□□□ 0.86
CACNB3-201ENST00000301050 RGS3P49796 1198 aa20.44■□□□□ 0.86
CACNB3-201ENST00000301050 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
CACNB3-201ENST00000301050 CLCN1P35523 988 aa20.43■□□□□ 0.86
CACNB3-201ENST00000301050 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
CACNB3-201ENST00000301050 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
CACNB3-201ENST00000301050 USP19O94966 1318 aa20.4■□□□□ 0.86
CACNB3-201ENST00000301050 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
CACNB3-201ENST00000301050 PIK3C2GO75747 1445 aa20.39■□□□□ 0.86
CACNB3-201ENST00000301050 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
CACNB3-201ENST00000301050 ARXQ96QS3 562 aa20.38■□□□□ 0.85
CACNB3-201ENST00000301050 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
CACNB3-201ENST00000301050 MYOM1P52179 1685 aa20.38■□□□□ 0.85
CACNB3-201ENST00000301050 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
CACNB3-201ENST00000301050 CDCA8Q53HL2 280 aa20.37■□□□□ 0.85
CACNB3-201ENST00000301050 IDI1Q13907 227 aa20.36■□□□□ 0.85
CACNB3-201ENST00000301050 KDM5AP29375 1690 aaKnown RBP20.36■□□□□ 0.85
CACNB3-201ENST00000301050 ERVK-7P63135 1459 aa20.36■□□□□ 0.85
CACNB3-201ENST00000301050 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 SETBP1Q9Y6X0 1596 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CACNB3-201ENST00000301050 C14orf93Q9H972 538 aaKnown RBP20.35■□□□□ 0.85
CACNB3-201ENST00000301050 TRAK1Q9UPV9 953 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 KIF13AQ9H1H9 1805 aa20.35■□□□□ 0.85
CACNB3-201ENST00000301050 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
CACNB3-201ENST00000301050 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
CACNB3-201ENST00000301050 GOLGA6L3A6NEY3 463 aa20.34■□□□□ 0.85
CACNB3-201ENST00000301050 FSD2A1L4K1 749 aa20.33■□□□□ 0.85
CACNB3-201ENST00000301050 BECN1Q14457 450 aa20.33■□□□□ 0.85
CACNB3-201ENST00000301050 INSRP06213 1382 aa20.33■□□□□ 0.85
CACNB3-201ENST00000301050 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
CACNB3-201ENST00000301050 FBXO31Q5XUX0 539 aaPredicted RBP20.33■□□□□ 0.84
CACNB3-201ENST00000301050 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.84
CACNB3-201ENST00000301050 ADGRB1O14514 1584 aa20.33■□□□□ 0.84
CACNB3-201ENST00000301050 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
CACNB3-201ENST00000301050 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
CACNB3-201ENST00000301050 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-201ENST00000301050 SEC24BO95487 1268 aa20.3■□□□□ 0.84
CACNB3-201ENST00000301050 MLECQ14165 292 aa20.29■□□□□ 0.84
CACNB3-201ENST00000301050 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
CACNB3-201ENST00000301050 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
CACNB3-201ENST00000301050 VGFO15240 615 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-201ENST00000301050 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-201ENST00000301050 REREQ9P2R6 1566 aa20.28■□□□□ 0.84
CACNB3-201ENST00000301050 CLTCQ00610 1675 aaKnown RBP20.27■□□□□ 0.84
CACNB3-201ENST00000301050 VIRMAQ69YN4 1812 aaKnown RBP20.27■□□□□ 0.84
CACNB3-201ENST00000301050 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.84
CACNB3-201ENST00000301050 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.83
CACNB3-201ENST00000301050 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.83
CACNB3-201ENST00000301050 AGLP35573 1532 aa20.26■□□□□ 0.83
CACNB3-201ENST00000301050 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
CACNB3-201ENST00000301050 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-201ENST00000301050 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
CACNB3-201ENST00000301050 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
CACNB3-201ENST00000301050 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
CACNB3-201ENST00000301050 ARHGEF40Q8TER5 1519 aa20.22■□□□□ 0.83
CACNB3-201ENST00000301050 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
CACNB3-201ENST00000301050 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
CACNB3-201ENST00000301050 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
CACNB3-201ENST00000301050 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
CACNB3-201ENST00000301050 ARHGEF28Q8N1W1 1705 aaKnown RBP20.21■□□□□ 0.83
CACNB3-201ENST00000301050 IGHDP01880 384 aa20.2■□□□□ 0.82
CACNB3-201ENST00000301050 MCM4P33991 863 aa20.2■□□□□ 0.82
CACNB3-201ENST00000301050 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
CACNB3-201ENST00000301050 ESPNB1AK53 854 aa20.2■□□□□ 0.82
CACNB3-201ENST00000301050 ERBB4Q15303 1308 aa20.19■□□□□ 0.82
CACNB3-201ENST00000301050 MRE11P49959 708 aa20.19■□□□□ 0.82
CACNB3-201ENST00000301050 STK26Q9P289 416 aa20.19■□□□□ 0.82
CACNB3-201ENST00000301050 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
CACNB3-201ENST00000301050 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
CACNB3-201ENST00000301050 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
CACNB3-201ENST00000301050 SAFB2Q14151 953 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNB3-201ENST00000301050 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
CACNB3-201ENST00000301050 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
CACNB3-201ENST00000301050 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
CACNB3-201ENST00000301050 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
CACNB3-201ENST00000301050 MYH16Q9H6N6 1097 aa20.16■□□□□ 0.82
CACNB3-201ENST00000301050 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
CACNB3-201ENST00000301050 MAPK8IP3Q9UPT6 1336 aa20.15■□□□□ 0.82
CACNB3-201ENST00000301050 TRAK2O60296 914 aa20.14■□□□□ 0.82
CACNB3-201ENST00000301050 TULP4Q9NRJ4 1543 aa20.14■□□□□ 0.81
CACNB3-201ENST00000301050 PDCL3Q9H2J4 239 aa20.14■□□□□ 0.81
CACNB3-201ENST00000301050 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
CACNB3-201ENST00000301050 TPM2P07951 284 aa20.13■□□□□ 0.81
CACNB3-201ENST00000301050 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
CACNB3-201ENST00000301050 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
CACNB3-201ENST00000301050 TBC1D32Q96NH3 1257 aa20.12■□□□□ 0.81
CACNB3-201ENST00000301050 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
CACNB3-201ENST00000301050 SPRYD3Q8NCJ5 442 aa20.12■□□□□ 0.81
CACNB3-201ENST00000301050 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
CACNB3-201ENST00000301050 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
CACNB3-201ENST00000301050 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
CACNB3-201ENST00000301050 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
CACNB3-201ENST00000301050 CABP2Q9NPB3 220 aa20.1■□□□□ 0.81
CACNB3-201ENST00000301050 BCAR3O75815 825 aa20.1■□□□□ 0.81
CACNB3-201ENST00000301050 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
CACNB3-201ENST00000301050 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms