RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
SNAPC4-201ENST00000298532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
SNAPC4-201ENST00000298532 HFM1A2PYH4 1435 aa20.04■□□□□ 0.8
SNAPC4-201ENST00000298532 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 CCDC173Q0VFZ6 552 aa20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 TPM1P09493 284 aa20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 ANKLE2Q86XL3 938 aa20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
SNAPC4-201ENST00000298532 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
SNAPC4-201ENST00000298532 CLSTN1O94985 981 aa20.02■□□□□ 0.8
SNAPC4-201ENST00000298532 TSR1Q2NL82 804 aaKnown RBP20.02■□□□□ 0.8
SNAPC4-201ENST00000298532 HOMER1Q86YM7 354 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 CDC45O75419 566 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 IFT57Q9NWB7 429 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 MINK1Q8N4C8 1332 aaPredicted RBP20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 RAPGEF3O95398 923 aa20.01■□□□□ 0.79
SNAPC4-201ENST00000298532 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
SNAPC4-201ENST00000298532 TAF7LQ5H9L4 462 aa20■□□□□ 0.79
SNAPC4-201ENST00000298532 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
SNAPC4-201ENST00000298532 MBD3O95983 291 aa20■□□□□ 0.79
SNAPC4-201ENST00000298532 TPD52L1Q16890 204 aaPredicted RBP20■□□□□ 0.79
SNAPC4-201ENST00000298532 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
SNAPC4-201ENST00000298532 ARGLU1Q9NWB6 273 aaPredicted RBP20■□□□□ 0.79
SNAPC4-201ENST00000298532 RIPK4P57078 832 aa19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 CCDC70Q6NSX1 233 aa19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 HMGN5P82970 282 aaKnown RBP19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 SASS6Q6UVJ0 657 aa19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
SNAPC4-201ENST00000298532 PROSER2Q86WR7 435 aaPredicted RBP19.98■□□□□ 0.79
SNAPC4-201ENST00000298532 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
SNAPC4-201ENST00000298532 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
SNAPC4-201ENST00000298532 VPS37CA5D8V6 355 aaPredicted RBP19.97■□□□□ 0.79
SNAPC4-201ENST00000298532 RNF214Q8ND24 703 aa19.97■□□□□ 0.79
SNAPC4-201ENST00000298532 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
SNAPC4-201ENST00000298532 PDE3AQ14432 1141 aa19.96■□□□□ 0.79
SNAPC4-201ENST00000298532 ZNF330Q9Y3S2 320 aaPredicted RBP19.96■□□□□ 0.79
SNAPC4-201ENST00000298532 PES1O00541 588 aaKnown RBP19.95■□□□□ 0.78
SNAPC4-201ENST00000298532 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
SNAPC4-201ENST00000298532 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
SNAPC4-201ENST00000298532 MSH5O43196 834 aa19.95■□□□□ 0.78
SNAPC4-201ENST00000298532 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
SNAPC4-201ENST00000298532 TEX14Q8IWB6 1497 aa19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 TOMM22Q9NS69 142 aa19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 RRP9O43818 475 aaKnown RBP19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 MNS1Q8NEH6 495 aa19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
SNAPC4-201ENST00000298532 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SNAPC4-201ENST00000298532 LETM1O95202 739 aaPredicted RBP19.93■□□□□ 0.78
SNAPC4-201ENST00000298532 GRPEL1Q9HAV7 217 aa19.93■□□□□ 0.78
SNAPC4-201ENST00000298532 C1orf141Q5JVX7 400 aa19.93■□□□□ 0.78
SNAPC4-201ENST00000298532 PRKCSHP14314 528 aaPredicted RBP19.92■□□□□ 0.78
SNAPC4-201ENST00000298532 GNAI1P63096 354 aa19.92■□□□□ 0.78
SNAPC4-201ENST00000298532 CCDC66A2RUB6 948 aa19.92■□□□□ 0.78
SNAPC4-201ENST00000298532 LTV1Q96GA3 475 aaPredicted RBP19.92■□□□□ 0.78
SNAPC4-201ENST00000298532 ADGRL1O94910 1474 aa19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 PNISRQ8TF01 805 aaKnown RBP19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 IPO7O95373 1038 aaKnown RBP19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 KIF14Q15058 1648 aa19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 RABEP1Q15276 862 aa19.91■□□□□ 0.78
SNAPC4-201ENST00000298532 TSPY26PQ9H489 355 aa19.9■□□□□ 0.78
SNAPC4-201ENST00000298532 NOM1Q5C9Z4 860 aaKnown RBP19.9■□□□□ 0.78
SNAPC4-201ENST00000298532 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
SNAPC4-201ENST00000298532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNAPC4-201ENST00000298532 ESPNB1AK53 854 aa19.9■□□□□ 0.78
SNAPC4-201ENST00000298532 IFIT2P09913 472 aaKnown RBP19.89■□□□□ 0.77
SNAPC4-201ENST00000298532 PRPF40AO75400 957 aaKnown RBP19.89■□□□□ 0.77
SNAPC4-201ENST00000298532 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
SNAPC4-201ENST00000298532 DMRT2Q9Y5R5 561 aa19.89■□□□□ 0.77
SNAPC4-201ENST00000298532 TIAM1Q13009 1591 aa19.89■□□□□ 0.77
SNAPC4-201ENST00000298532 ACBD3Q9H3P7 528 aa19.88■□□□□ 0.77
SNAPC4-201ENST00000298532 MCM2P49736 904 aa19.88■□□□□ 0.77
SNAPC4-201ENST00000298532 HOOK1Q9UJC3 728 aaKnown RBP19.88■□□□□ 0.77
SNAPC4-201ENST00000298532 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
SNAPC4-201ENST00000298532 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
SNAPC4-201ENST00000298532 MCM4P33991 863 aa19.87■□□□□ 0.77
SNAPC4-201ENST00000298532 CEP89Q96ST8 783 aa19.86■□□□□ 0.77
SNAPC4-201ENST00000298532 CPLX1O14810 134 aa19.86■□□□□ 0.77
SNAPC4-201ENST00000298532 AKAP17AQ02040 695 aaKnown RBP19.86■□□□□ 0.77
SNAPC4-201ENST00000298532 TRIM29Q14134 588 aa19.86■□□□□ 0.77
SNAPC4-201ENST00000298532 NINLQ9Y2I6 1382 aa19.86■□□□□ 0.77
SNAPC4-201ENST00000298532 HSP90B2PQ58FF3 399 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 HSP90AB4PQ58FF6 505 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 C9orf78Q9NZ63 289 aaPredicted RBP19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 TCP11L2Q8N4U5 519 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 DAPK1P53355 1430 aa19.85■□□□□ 0.77
SNAPC4-201ENST00000298532 NAT10Q9H0A0 1025 aaKnown RBP19.84■□□□□ 0.77
SNAPC4-201ENST00000298532 ANKRD30BQ9BXX2 1392 aa19.84■□□□□ 0.77
SNAPC4-201ENST00000298532 CIZ1Q9ULV3 898 aaPredicted RBP19.84■□□□□ 0.77
SNAPC4-201ENST00000298532 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms