RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 HSPA2P54652 639 aa34.07■■■■□ 3.04
GTF2A1-201ENST00000298173 XRN1Q8IZH2 1706 aaKnown RBP34.07■■■■□ 3.04
GTF2A1-201ENST00000298173 EVC2Q86UK5 1308 aa34.06■■■■□ 3.04
GTF2A1-201ENST00000298173 MIER1Q8N108 512 aa34.06■■■■□ 3.04
GTF2A1-201ENST00000298173 PTCH1Q13635 1447 aa34.03■■■■□ 3.04
GTF2A1-201ENST00000298173 MINK1Q8N4C8 1332 aaPredicted RBP34.03■■■■□ 3.04
GTF2A1-201ENST00000298173 MYOM1P52179 1685 aa34.01■■■■□ 3.03
GTF2A1-201ENST00000298173 KCNA6P17658 529 aa33.97■■■■□ 3.03
GTF2A1-201ENST00000298173 STRCQ7RTU9 1775 aa33.97■■■■□ 3.03
GTF2A1-201ENST00000298173 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.95■■■■□ 3.03
GTF2A1-201ENST00000298173 PER1O15534 1290 aaPredicted RBP33.94■■■■□ 3.02
GTF2A1-201ENST00000298173 CDK19Q9BWU1 502 aa33.93■■■■□ 3.02
GTF2A1-201ENST00000298173 PANK3Q9H999 370 aa33.93■■■■□ 3.02
GTF2A1-201ENST00000298173 CABP2Q9NPB3 220 aa33.93■■■■□ 3.02
GTF2A1-201ENST00000298173 ADGRB2O60241 1585 aa33.9■■■■□ 3.02
GTF2A1-201ENST00000298173 WASLO00401 505 aaPredicted RBP33.9■■■■□ 3.02
GTF2A1-201ENST00000298173 ANP32CO43423 234 aa33.9■■■■□ 3.02
GTF2A1-201ENST00000298173 SRPK2P78362 688 aaKnown RBP33.89■■■■□ 3.02
GTF2A1-201ENST00000298173 NWD1Q149M9 1564 aa33.89■■■■□ 3.01
GTF2A1-201ENST00000298173 ATAD2Q6PL18 1390 aa33.86■■■■□ 3.01
GTF2A1-201ENST00000298173 SLC12A5Q9H2X9 1139 aa33.85■■■■□ 3.01
GTF2A1-201ENST00000298173 NINLQ9Y2I6 1382 aa33.82■■■■□ 3
GTF2A1-201ENST00000298173 PRKRIP1Q9H875 184 aaPredicted RBP33.8■■■■□ 3
GTF2A1-201ENST00000298173 TMC1Q8TDI8 760 aa33.8■■■■□ 3
GTF2A1-201ENST00000298173 CARD14Q9BXL6 1004 aa33.77■■■■□ 3
GTF2A1-201ENST00000298173 STRCP1A6NGW2 1772 aa33.75■■■□□ 2.99
GTF2A1-201ENST00000298173 NKTRP30414 1462 aaKnown RBP33.74■■■□□ 2.99
GTF2A1-201ENST00000298173 NUDT16Q96DE0 195 aaKnown RBP33.74■■■□□ 2.99
GTF2A1-201ENST00000298173 ANKRD36BQ8N2N9 1353 aa33.72■■■□□ 2.99
GTF2A1-201ENST00000298173 KNSTRNQ9Y448 316 aa33.72■■■□□ 2.99
GTF2A1-201ENST00000298173 ATP7BP35670 1465 aa33.71■■■□□ 2.99
GTF2A1-201ENST00000298173 PRR36Q9H6K5 1346 aa33.71■■■□□ 2.99
GTF2A1-201ENST00000298173 NALCNQ8IZF0 1738 aa33.71■■■□□ 2.99
GTF2A1-201ENST00000298173 CABP1Q9NZU7 370 aa33.71■■■□□ 2.99
GTF2A1-201ENST00000298173 CCDC61Q9Y6R9 512 aa33.71■■■□□ 2.99
GTF2A1-201ENST00000298173 CD163L1Q9NR16 1453 aa33.7■■■□□ 2.99
GTF2A1-201ENST00000298173 AMER1Q5JTC6 1135 aaPredicted RBP33.7■■■□□ 2.99
GTF2A1-201ENST00000298173 CCER2I3L3R5 266 aa33.69■■■□□ 2.98
GTF2A1-201ENST00000298173 NPC1L1Q9UHC9 1359 aa33.68■■■□□ 2.98
GTF2A1-201ENST00000298173 KTN1Q86UP2 1357 aaKnown RBP33.67■■■□□ 2.98
GTF2A1-201ENST00000298173 PROSER2Q86WR7 435 aaPredicted RBP33.67■■■□□ 2.98
GTF2A1-201ENST00000298173 ADGRL3Q9HAR2 1447 aa33.67■■■□□ 2.98
GTF2A1-201ENST00000298173 RBM33Q96EV2 1170 aaKnown RBP33.66■■■□□ 2.98
GTF2A1-201ENST00000298173 USP32Q8NFA0 1604 aa33.65■■■□□ 2.98
GTF2A1-201ENST00000298173 A0A1W2PP64 1363 aa33.65■■■□□ 2.98
GTF2A1-201ENST00000298173 CDC42BPGQ6DT37 1551 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 PPIP5K1Q6PFW1 1433 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 TERF2IPQ9NYB0 399 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 DMRT2Q9Y5R5 561 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 TOPAZ1Q8N9V7 1692 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 RALBP1Q15311 655 aa33.64■■■□□ 2.98
GTF2A1-201ENST00000298173 FMN2Q9NZ56 1722 aa33.63■■■□□ 2.97
GTF2A1-201ENST00000298173 PARD3Q8TEW0 1356 aa33.63■■■□□ 2.97
GTF2A1-201ENST00000298173 NSD3Q9BZ95 1437 aa33.62■■■□□ 2.97
GTF2A1-201ENST00000298173 NCOA3Q9Y6Q9 1424 aa33.61■■■□□ 2.97
GTF2A1-201ENST00000298173 CPSF1Q10570 1443 aaKnown RBP33.6■■■□□ 2.97
GTF2A1-201ENST00000298173 ANKARQ7Z5J8 1434 aa33.6■■■□□ 2.97
GTF2A1-201ENST00000298173 RGPD8O14715 1765 aaPredicted RBP33.59■■■□□ 2.97
GTF2A1-201ENST00000298173 PLEKHG3A1L390 1219 aa33.59■■■□□ 2.97
GTF2A1-201ENST00000298173 CC2D1BQ5T0F9 858 aaKnown RBP33.59■■■□□ 2.97
GTF2A1-201ENST00000298173 CNGB1Q14028 1251 aaPredicted RBP33.58■■■□□ 2.97
GTF2A1-201ENST00000298173 HDGFL2Q7Z4V5 671 aaPredicted RBP33.58■■■□□ 2.97
GTF2A1-201ENST00000298173 NUTM2FA1L443 756 aa33.57■■■□□ 2.96
GTF2A1-201ENST00000298173 TMEM94Q12767 1356 aa33.56■■■□□ 2.96
GTF2A1-201ENST00000298173 ITSN1Q15811 1721 aa33.55■■■□□ 2.96
GTF2A1-201ENST00000298173 AKAP12Q02952 1782 aa33.54■■■□□ 2.96
GTF2A1-201ENST00000298173 C19orf44Q9H6X5 657 aa33.54■■■□□ 2.96
GTF2A1-201ENST00000298173 ZNF335Q9H4Z2 1342 aaPredicted RBP33.53■■■□□ 2.96
GTF2A1-201ENST00000298173 C14orf37Q86TY3 774 aa33.52■■■□□ 2.96
GTF2A1-201ENST00000298173 ZNF692Q9BU19 519 aaPredicted RBP33.52■■■□□ 2.96
GTF2A1-201ENST00000298173 CGNL1Q0VF96 1302 aa33.51■■■□□ 2.96
GTF2A1-201ENST00000298173 MYBBP1AQ9BQG0 1328 aaKnown RBP33.5■■■□□ 2.95
GTF2A1-201ENST00000298173 XIRP1Q702N8 1843 aaKnown RBP33.5■■■□□ 2.95
GTF2A1-201ENST00000298173 MON2Q7Z3U7 1717 aa33.49■■■□□ 2.95
GTF2A1-201ENST00000298173 CCDC184Q52MB2 194 aa33.48■■■□□ 2.95
GTF2A1-201ENST00000298173 LRRC7Q96NW7 1537 aa33.48■■■□□ 2.95
GTF2A1-201ENST00000298173 ACEP12821 1306 aa33.47■■■□□ 2.95
GTF2A1-201ENST00000298173 POLR3AO14802 1390 aaPredicted RBP33.46■■■□□ 2.95
GTF2A1-201ENST00000298173 NSD2O96028 1365 aa33.46■■■□□ 2.95
GTF2A1-201ENST00000298173 EDC4Q6P2E9 1401 aaKnown RBP33.45■■■□□ 2.94
GTF2A1-201ENST00000298173 DCCP43146 1447 aa33.44■■■□□ 2.94
GTF2A1-201ENST00000298173 FYB1O15117 783 aa33.43■■■□□ 2.94
GTF2A1-201ENST00000298173 PMFBP1Q8TBY8 1022 aa33.42■■■□□ 2.94
GTF2A1-201ENST00000298173 NLRP13Q86W25 1043 aa33.39■■■□□ 2.94
GTF2A1-201ENST00000298173 BRD4O60885 1362 aaPredicted RBP33.39■■■□□ 2.94
GTF2A1-201ENST00000298173 USP6P35125 1406 aa33.39■■■□□ 2.94
GTF2A1-201ENST00000298173 SSH2Q76I76 1423 aa33.39■■■□□ 2.94
GTF2A1-201ENST00000298173 KIF20BQ96Q89 1820 aa33.38■■■□□ 2.93
GTF2A1-201ENST00000298173 PPP2R1AP30153 589 aa33.38■■■□□ 2.93
GTF2A1-201ENST00000298173 MRS2Q9HD23 443 aa33.38■■■□□ 2.93
GTF2A1-201ENST00000298173 NRKQ7Z2Y5 1582 aa33.37■■■□□ 2.93
GTF2A1-201ENST00000298173 ANKRD26Q9UPS8 1709 aa33.37■■■□□ 2.93
GTF2A1-201ENST00000298173 PHF8Q9UPP1 1060 aa33.36■■■□□ 2.93
GTF2A1-201ENST00000298173 ATF3P18847 181 aa33.36■■■□□ 2.93
GTF2A1-201ENST00000298173 MORC1Q86VD1 984 aa33.36■■■□□ 2.93
GTF2A1-201ENST00000298173 NGDNQ8NEJ9 315 aaKnown RBP33.36■■■□□ 2.93
GTF2A1-201ENST00000298173 MSH6P52701 1360 aa33.35■■■□□ 2.93
GTF2A1-201ENST00000298173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.35■■■□□ 2.93
GTF2A1-201ENST00000298173 C1orf167Q5SNV9 1468 aa33.35■■■□□ 2.93
GTF2A1-201ENST00000298173 CADPS2Q86UW7 1296 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms