RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 PPP6R1Q9UPN7 881 aa26.04■■□□□ 1.76
NFIL3-201ENST00000297689 TCERG1O14776 1098 aaKnown RBP26.03■■□□□ 1.76
NFIL3-201ENST00000297689 CRBNQ96SW2 442 aa26.03■■□□□ 1.76
NFIL3-201ENST00000297689 PUS7Q96PZ0 661 aaKnown RBP26.02■■□□□ 1.76
NFIL3-201ENST00000297689 USP32Q8NFA0 1604 aa26.01■■□□□ 1.75
NFIL3-201ENST00000297689 ARHGEF28Q8N1W1 1705 aaKnown RBP26.01■■□□□ 1.75
NFIL3-201ENST00000297689 NGEFQ8N5V2 710 aa26■■□□□ 1.75
NFIL3-201ENST00000297689 C20orf194Q5TEA3 1177 aa25.99■■□□□ 1.75
NFIL3-201ENST00000297689 APAF1O14727 1248 aa25.98■■□□□ 1.75
NFIL3-201ENST00000297689 NSD3Q9BZ95 1437 aa25.98■■□□□ 1.75
NFIL3-201ENST00000297689 MS4A1P11836 297 aa25.97■■□□□ 1.75
NFIL3-201ENST00000297689 CCDC146Q8IYE0 955 aa25.97■■□□□ 1.75
NFIL3-201ENST00000297689 SPATA31D1Q6ZQQ2 1576 aa25.97■■□□□ 1.75
NFIL3-201ENST00000297689 SLC12A5Q9H2X9 1139 aa25.97■■□□□ 1.75
NFIL3-201ENST00000297689 MLECQ14165 292 aa25.96■■□□□ 1.75
NFIL3-201ENST00000297689 SPINK5Q9NQ38 1064 aaPredicted RBP25.95■■□□□ 1.75
NFIL3-201ENST00000297689 SHPRHQ149N8 1683 aa25.95■■□□□ 1.75
NFIL3-201ENST00000297689 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
NFIL3-201ENST00000297689 KDM2BQ8NHM5 1336 aa25.92■■□□□ 1.74
NFIL3-201ENST00000297689 NKTRP30414 1462 aaKnown RBP25.92■■□□□ 1.74
NFIL3-201ENST00000297689 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
NFIL3-201ENST00000297689 SENP3Q9H4L4 574 aaPredicted RBP25.91■■□□□ 1.74
NFIL3-201ENST00000297689 IPO9Q96P70 1041 aaKnown RBP25.9■■□□□ 1.74
NFIL3-201ENST00000297689 NOP58Q9Y2X3 529 aaKnown RBP25.9■■□□□ 1.74
NFIL3-201ENST00000297689 E9PSI1 815 aa25.89■■□□□ 1.74
NFIL3-201ENST00000297689 BACH2Q9BYV9 841 aa25.89■■□□□ 1.74
NFIL3-201ENST00000297689 A2ML1A8K2U0 1454 aa25.89■■□□□ 1.73
NFIL3-201ENST00000297689 PDE4AP27815 886 aa25.88■■□□□ 1.73
NFIL3-201ENST00000297689 MORC1Q86VD1 984 aa25.88■■□□□ 1.73
NFIL3-201ENST00000297689 DMRT2Q9Y5R5 561 aa25.87■■□□□ 1.73
NFIL3-201ENST00000297689 ANP32AP39687 249 aaKnown RBP25.87■■□□□ 1.73
NFIL3-201ENST00000297689 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.86■■□□□ 1.73
NFIL3-201ENST00000297689 EVC2Q86UK5 1308 aa25.86■■□□□ 1.73
NFIL3-201ENST00000297689 ANKRD36BQ8N2N9 1353 aa25.86■■□□□ 1.73
NFIL3-201ENST00000297689 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
NFIL3-201ENST00000297689 PAK3O75914 559 aaPredicted RBP25.86■■□□□ 1.73
NFIL3-201ENST00000297689 PHF23Q9BUL5 403 aaPredicted RBP25.84■■□□□ 1.73
NFIL3-201ENST00000297689 PTPRMP28827 1452 aa25.84■■□□□ 1.73
NFIL3-201ENST00000297689 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
NFIL3-201ENST00000297689 IQSEC2Q5JU85 1478 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 WWC1Q8IX03 1113 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 STK26Q9P289 416 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 STAG3Q9UJ98 1225 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 NSD2O96028 1365 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 ZMYM3Q14202 1370 aa25.83■■□□□ 1.73
NFIL3-201ENST00000297689 YTHDC2Q9H6S0 1430 aaKnown RBP25.81■■□□□ 1.72
NFIL3-201ENST00000297689 CENPQQ7L2Z9 268 aaPredicted RBP25.8■■□□□ 1.72
NFIL3-201ENST00000297689 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
NFIL3-201ENST00000297689 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
NFIL3-201ENST00000297689 RUNDC1Q96C34 613 aa25.78■■□□□ 1.72
NFIL3-201ENST00000297689 SETD1AO15047 1707 aaKnown RBP25.78■■□□□ 1.72
NFIL3-201ENST00000297689 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
NFIL3-201ENST00000297689 NINLQ9Y2I6 1382 aa25.77■■□□□ 1.72
NFIL3-201ENST00000297689 MTHFSP49914 203 aa25.77■■□□□ 1.72
NFIL3-201ENST00000297689 BCAR3O75815 825 aa25.76■■□□□ 1.71
NFIL3-201ENST00000297689 SKAP1Q86WV1 359 aa25.75■■□□□ 1.71
NFIL3-201ENST00000297689 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
NFIL3-201ENST00000297689 CABP2Q9NPB3 220 aa25.75■■□□□ 1.71
NFIL3-201ENST00000297689 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
NFIL3-201ENST00000297689 TNNT2P45379 298 aaPredicted RBP25.74■■□□□ 1.71
NFIL3-201ENST00000297689 CCDC27Q2M243 656 aa25.73■■□□□ 1.71
NFIL3-201ENST00000297689 PRAM1Q96QH2 718 aa25.73■■□□□ 1.71
NFIL3-201ENST00000297689 TCP11L2Q8N4U5 519 aa25.73■■□□□ 1.71
NFIL3-201ENST00000297689 NRXN3Q9Y4C0 1643 aa25.72■■□□□ 1.71
NFIL3-201ENST00000297689 ZBTB47Q9UFB7 747 aaPredicted RBP25.72■■□□□ 1.71
NFIL3-201ENST00000297689 PDE3AQ14432 1141 aa25.71■■□□□ 1.71
NFIL3-201ENST00000297689 WDR63Q8IWG1 891 aa25.71■■□□□ 1.71
NFIL3-201ENST00000297689 A0A1W2PP64 1363 aa25.71■■□□□ 1.71
NFIL3-201ENST00000297689 CFAP53Q96M91 514 aa25.7■■□□□ 1.7
NFIL3-201ENST00000297689 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
NFIL3-201ENST00000297689 TNRQ92752 1358 aa25.69■■□□□ 1.7
NFIL3-201ENST00000297689 ADGRB2O60241 1585 aa25.68■■□□□ 1.7
NFIL3-201ENST00000297689 CD163L1Q9NR16 1453 aa25.68■■□□□ 1.7
NFIL3-201ENST00000297689 POGKQ9P215 609 aa25.67■■□□□ 1.7
NFIL3-201ENST00000297689 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
NFIL3-201ENST00000297689 MED14O60244 1454 aa25.67■■□□□ 1.7
NFIL3-201ENST00000297689 ATAD2Q6PL18 1390 aa25.67■■□□□ 1.7
NFIL3-201ENST00000297689 NLRP1Q9C000 1473 aa25.66■■□□□ 1.7
NFIL3-201ENST00000297689 UBR1Q8IWV7 1749 aa25.65■■□□□ 1.7
NFIL3-201ENST00000297689 COL3A1P02461 1466 aaPredicted RBP25.64■■□□□ 1.7
NFIL3-201ENST00000297689 SRPK2P78362 688 aaKnown RBP25.64■■□□□ 1.7
NFIL3-201ENST00000297689 ANKRD26Q9UPS8 1709 aa25.64■■□□□ 1.69
NFIL3-201ENST00000297689 RRP7AQ9Y3A4 280 aaKnown RBP25.64■■□□□ 1.69
NFIL3-201ENST00000297689 FER1L4A9Z1Z3 1794 aa25.63■■□□□ 1.69
NFIL3-201ENST00000297689 RARSP54136 660 aaKnown RBP25.62■■□□□ 1.69
NFIL3-201ENST00000297689 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.62■■□□□ 1.69
NFIL3-201ENST00000297689 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
NFIL3-201ENST00000297689 CEBPAP49715 358 aaPredicted RBP25.6■■□□□ 1.69
NFIL3-201ENST00000297689 NPM2Q86SE8 214 aaKnown RBP25.6■■□□□ 1.69
NFIL3-201ENST00000297689 METP08581 1390 aa25.59■■□□□ 1.69
NFIL3-201ENST00000297689 FYB1O15117 783 aa25.59■■□□□ 1.69
NFIL3-201ENST00000297689 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
NFIL3-201ENST00000297689 C3P01024 1663 aa25.59■■□□□ 1.69
NFIL3-201ENST00000297689 CDK19Q9BWU1 502 aa25.59■■□□□ 1.69
NFIL3-201ENST00000297689 C8orf34Q49A92 452 aa25.58■■□□□ 1.69
NFIL3-201ENST00000297689 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
NFIL3-201ENST00000297689 TERF2IPQ9NYB0 399 aa25.57■■□□□ 1.68
NFIL3-201ENST00000297689 TMEM2Q9UHN6 1383 aa25.57■■□□□ 1.68
NFIL3-201ENST00000297689 IGHDP01880 384 aa25.56■■□□□ 1.68
NFIL3-201ENST00000297689 U2AF1L5P0DN76 240 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms