RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 SSH1Q8WYL5 1049 aa20.53■□□□□ 0.88
SBSPON-201ENST00000297354 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
SBSPON-201ENST00000297354 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
SBSPON-201ENST00000297354 SPC24Q8NBT2 197 aa20.53■□□□□ 0.88
SBSPON-201ENST00000297354 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
SBSPON-201ENST00000297354 TRIM27P14373 513 aa20.52■□□□□ 0.88
SBSPON-201ENST00000297354 CFAP70Q5T0N1 1121 aa20.52■□□□□ 0.88
SBSPON-201ENST00000297354 ST18O60284 1047 aa20.52■□□□□ 0.88
SBSPON-201ENST00000297354 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.88
SBSPON-201ENST00000297354 CHD1LQ86WJ1 897 aa20.52■□□□□ 0.87
SBSPON-201ENST00000297354 ZNF592Q92610 1267 aa20.51■□□□□ 0.87
SBSPON-201ENST00000297354 NUCB2P80303 420 aa20.51■□□□□ 0.87
SBSPON-201ENST00000297354 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
SBSPON-201ENST00000297354 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
SBSPON-201ENST00000297354 STK26Q9P289 416 aa20.5■□□□□ 0.87
SBSPON-201ENST00000297354 CGNQ9P2M7 1197 aaKnown RBP20.5■□□□□ 0.87
SBSPON-201ENST00000297354 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
SBSPON-201ENST00000297354 KLHL40Q2TBA0 621 aa20.49■□□□□ 0.87
SBSPON-201ENST00000297354 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
SBSPON-201ENST00000297354 PKP1Q13835 747 aa20.49■□□□□ 0.87
SBSPON-201ENST00000297354 PZPP20742 1482 aa20.49■□□□□ 0.87
SBSPON-201ENST00000297354 SASS6Q6UVJ0 657 aa20.48■□□□□ 0.87
SBSPON-201ENST00000297354 RALGAPBQ86X10 1494 aa20.48■□□□□ 0.87
SBSPON-201ENST00000297354 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
SBSPON-201ENST00000297354 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
SBSPON-201ENST00000297354 VGLL3A8MV65 326 aa20.48■□□□□ 0.87
SBSPON-201ENST00000297354 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
SBSPON-201ENST00000297354 GRIN2BQ13224 1484 aa20.47■□□□□ 0.87
SBSPON-201ENST00000297354 KIF16BQ96L93 1317 aa20.47■□□□□ 0.87
SBSPON-201ENST00000297354 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
SBSPON-201ENST00000297354 TTC12Q9H892 705 aaPredicted RBP20.47■□□□□ 0.87
SBSPON-201ENST00000297354 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
SBSPON-201ENST00000297354 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
SBSPON-201ENST00000297354 TRERF1Q96PN7 1200 aa20.47■□□□□ 0.87
SBSPON-201ENST00000297354 USP25Q9UHP3 1055 aa20.46■□□□□ 0.87
SBSPON-201ENST00000297354 NPHP1O15259 732 aa20.46■□□□□ 0.87
SBSPON-201ENST00000297354 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
SBSPON-201ENST00000297354 ZGPATQ8N5A5 531 aaKnown RBP20.46■□□□□ 0.87
SBSPON-201ENST00000297354 PLEKHH2Q8IVE3 1493 aa20.46■□□□□ 0.87
SBSPON-201ENST00000297354 NEK4P51957 841 aa20.46■□□□□ 0.87
SBSPON-201ENST00000297354 BLMP54132 1417 aaPredicted RBP20.46■□□□□ 0.87
SBSPON-201ENST00000297354 ZKSCAN5Q9Y2L8 839 aa20.45■□□□□ 0.86
SBSPON-201ENST00000297354 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
SBSPON-201ENST00000297354 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
SBSPON-201ENST00000297354 TRIM6-TRIM34B2RNG4 842 aa20.45■□□□□ 0.86
SBSPON-201ENST00000297354 PLCD3Q8N3E9 789 aa20.45■□□□□ 0.86
SBSPON-201ENST00000297354 DTNBO60941 627 aa20.44■□□□□ 0.86
SBSPON-201ENST00000297354 TAOK2Q9UL54 1235 aa20.44■□□□□ 0.86
SBSPON-201ENST00000297354 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
SBSPON-201ENST00000297354 CDC45O75419 566 aa20.43■□□□□ 0.86
SBSPON-201ENST00000297354 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
SBSPON-201ENST00000297354 DYNC1I1O14576 645 aa20.43■□□□□ 0.86
SBSPON-201ENST00000297354 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
SBSPON-201ENST00000297354 THUMPD2Q9BTF0 503 aaKnown RBP20.43■□□□□ 0.86
SBSPON-201ENST00000297354 GGNBP2Q9H3C7 697 aa20.43■□□□□ 0.86
SBSPON-201ENST00000297354 PDE4CQ08493 712 aa20.42■□□□□ 0.86
SBSPON-201ENST00000297354 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
SBSPON-201ENST00000297354 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
SBSPON-201ENST00000297354 SLC4A10Q6U841 1118 aa20.42■□□□□ 0.86
SBSPON-201ENST00000297354 RILPL2Q969X0 211 aa20.42■□□□□ 0.86
SBSPON-201ENST00000297354 AAMPQ13685 434 aa20.41■□□□□ 0.86
SBSPON-201ENST00000297354 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
SBSPON-201ENST00000297354 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
SBSPON-201ENST00000297354 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
SBSPON-201ENST00000297354 ERICH4A6NGS2 130 aa20.4■□□□□ 0.86
SBSPON-201ENST00000297354 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
SBSPON-201ENST00000297354 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
SBSPON-201ENST00000297354 SOX12O15370 315 aa20.39■□□□□ 0.85
SBSPON-201ENST00000297354 HMOX1P09601 288 aa20.39■□□□□ 0.85
SBSPON-201ENST00000297354 LARP6Q9BRS8 491 aaKnown RBP20.39■□□□□ 0.85
SBSPON-201ENST00000297354 SMARCA5O60264 1052 aaPredicted RBP20.38■□□□□ 0.85
SBSPON-201ENST00000297354 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
SBSPON-201ENST00000297354 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
SBSPON-201ENST00000297354 RABEP1Q15276 862 aa20.37■□□□□ 0.85
SBSPON-201ENST00000297354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.37■□□□□ 0.85
SBSPON-201ENST00000297354 FIBPO43427 364 aa20.36■□□□□ 0.85
SBSPON-201ENST00000297354 CCDC94Q9BW85 323 aaPredicted RBP20.36■□□□□ 0.85
SBSPON-201ENST00000297354 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
SBSPON-201ENST00000297354 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
SBSPON-201ENST00000297354 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
SBSPON-201ENST00000297354 SMAP1Q8IYB5 467 aaPredicted RBP20.35■□□□□ 0.85
SBSPON-201ENST00000297354 PPP1R9BQ96SB3 815 aa20.35■□□□□ 0.85
SBSPON-201ENST00000297354 CARD14Q9BXL6 1004 aa20.35■□□□□ 0.85
SBSPON-201ENST00000297354 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
SBSPON-201ENST00000297354 KDM5CP41229 1560 aa20.35■□□□□ 0.85
SBSPON-201ENST00000297354 WDR63Q8IWG1 891 aa20.35■□□□□ 0.85
SBSPON-201ENST00000297354 CHMP4BQ9H444 224 aaKnown RBP20.35■□□□□ 0.85
SBSPON-201ENST00000297354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
SBSPON-201ENST00000297354 TCOF1Q13428 1488 aaKnown RBP20.34■□□□□ 0.85
SBSPON-201ENST00000297354 GOLGA6L4A6NEF3 574 aa20.33■□□□□ 0.85
SBSPON-201ENST00000297354 SNX21Q969T3 373 aa20.33■□□□□ 0.85
SBSPON-201ENST00000297354 NGEFQ8N5V2 710 aa20.33■□□□□ 0.85
SBSPON-201ENST00000297354 TMEM63CQ9P1W3 806 aa20.33■□□□□ 0.84
SBSPON-201ENST00000297354 NINLQ9Y2I6 1382 aa20.33■□□□□ 0.84
SBSPON-201ENST00000297354 U2AF2P26368 475 aaKnown RBP eCLIP20.32■□□□□ 0.84
SBSPON-201ENST00000297354 TSHZ3Q63HK5 1081 aa20.32■□□□□ 0.84
SBSPON-201ENST00000297354 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
SBSPON-201ENST00000297354 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
SBSPON-201ENST00000297354 HMGN5P82970 282 aaKnown RBP20.32■□□□□ 0.84
SBSPON-201ENST00000297354 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms