RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 NUTM2BA6NNL0 878 aaPredicted RBP37.41■■■■□ 3.58
U2AF1-201ENST00000291552 NUTM2EB1AL46 878 aaPredicted RBP37.41■■■■□ 3.58
U2AF1-201ENST00000291552 TMEM132EQ6IEE7 984 aa37.41■■■■□ 3.58
U2AF1-201ENST00000291552 NUTM2AQ8IVF1 878 aaPredicted RBP37.41■■■■□ 3.58
U2AF1-201ENST00000291552 STK26Q9P289 416 aa37.41■■■■□ 3.58
U2AF1-201ENST00000291552 PLEKHH1Q9ULM0 1364 aa37.41■■■■□ 3.58
U2AF1-201ENST00000291552 YTHDC2Q9H6S0 1430 aaKnown RBP37.39■■■■□ 3.58
U2AF1-201ENST00000291552 WAPLQ7Z5K2 1190 aa37.38■■■■□ 3.57
U2AF1-201ENST00000291552 SOS2Q07890 1332 aaPredicted RBP37.36■■■■□ 3.57
U2AF1-201ENST00000291552 FMN2Q9NZ56 1722 aa37.36■■■■□ 3.57
U2AF1-201ENST00000291552 ZNF772Q68DY9 489 aaPredicted RBP37.33■■■■□ 3.57
U2AF1-201ENST00000291552 C14orf93Q9H972 538 aaKnown RBP37.32■■■■□ 3.56
U2AF1-201ENST00000291552 COL22A1Q8NFW1 1626 aaPredicted RBP37.3■■■■□ 3.56
U2AF1-201ENST00000291552 PXDNQ92626 1479 aa37.29■■■■□ 3.56
U2AF1-201ENST00000291552 AFF2P51816 1311 aa37.28■■■■□ 3.56
U2AF1-201ENST00000291552 CFAP70Q5T0N1 1121 aa37.27■■■■□ 3.56
U2AF1-201ENST00000291552 RGPD8O14715 1765 aaPredicted RBP37.24■■■■□ 3.55
U2AF1-201ENST00000291552 ESCO1Q5FWF5 840 aa37.24■■■■□ 3.55
U2AF1-201ENST00000291552 ADGRB1O14514 1584 aa37.23■■■■□ 3.55
U2AF1-201ENST00000291552 NUTM2FA1L443 756 aa37.21■■■■□ 3.55
U2AF1-201ENST00000291552 SIRT1Q96EB6 747 aa37.2■■■■□ 3.55
U2AF1-201ENST00000291552 KIF1AQ12756 1690 aa37.2■■■■□ 3.55
U2AF1-201ENST00000291552 DHX57Q6P158 1386 aaKnown RBP37.19■■■■□ 3.54
U2AF1-201ENST00000291552 NPHP3Q7Z494 1330 aa37.19■■■■□ 3.54
U2AF1-201ENST00000291552 HRCP23327 699 aa37.19■■■■□ 3.54
U2AF1-201ENST00000291552 C8orf37Q96NL8 207 aa37.19■■■■□ 3.54
U2AF1-201ENST00000291552 DLC1Q96QB1 1528 aa37.19■■■■□ 3.54
U2AF1-201ENST00000291552 CDK12Q9NYV4 1490 aaPredicted RBP37.15■■■■□ 3.54
U2AF1-201ENST00000291552 MARF1Q9Y4F3 1742 aaKnown RBP37.14■■■■□ 3.54
U2AF1-201ENST00000291552 FOXO3O43524 673 aa37.14■■■■□ 3.54
U2AF1-201ENST00000291552 ADAMTS2O95450 1211 aa37.14■■■■□ 3.54
U2AF1-201ENST00000291552 XPCQ01831 940 aaPredicted RBP37.14■■■■□ 3.54
U2AF1-201ENST00000291552 RXRBP28702 533 aa37.13■■■■□ 3.53
U2AF1-201ENST00000291552 ADGRB2O60241 1585 aa37.11■■■■□ 3.53
U2AF1-201ENST00000291552 USP32Q8NFA0 1604 aa37.1■■■■□ 3.53
U2AF1-201ENST00000291552 PRAM1Q96QH2 718 aa37.09■■■■□ 3.53
U2AF1-201ENST00000291552 SAFB2Q14151 953 aaKnown RBP eCLIP37.07■■■■□ 3.52
U2AF1-201ENST00000291552 RGS12O14924 1447 aa37.05■■■■□ 3.52
U2AF1-201ENST00000291552 DCAF11Q8TEB1 546 aa37.05■■■■□ 3.52
U2AF1-201ENST00000291552 NGLY1Q96IV0 654 aa37.05■■■■□ 3.52
U2AF1-201ENST00000291552 QTRT2Q9H974 415 aaKnown RBP37.04■■■■□ 3.52
U2AF1-201ENST00000291552 KDM2AQ9Y2K7 1162 aa37.04■■■■□ 3.52
U2AF1-201ENST00000291552 ARHGEF28Q8N1W1 1705 aaKnown RBP37■■■■□ 3.51
U2AF1-201ENST00000291552 RBM6P78332 1123 aaKnown RBP36.98■■■■□ 3.51
U2AF1-201ENST00000291552 FNBP4Q8N3X1 1017 aaPredicted RBP36.98■■■■□ 3.51
U2AF1-201ENST00000291552 TRAK1Q9UPV9 953 aa36.98■■■■□ 3.51
U2AF1-201ENST00000291552 SPATA31A3Q5VYP0 1347 aa36.98■■■■□ 3.51
U2AF1-201ENST00000291552 UPF1Q92900 1129 aaKnown RBP eCLIP36.97■■■■□ 3.51
U2AF1-201ENST00000291552 POGKQ9P215 609 aa36.96■■■■□ 3.51
U2AF1-201ENST00000291552 PHF8Q9UPP1 1060 aa36.96■■■■□ 3.51
U2AF1-201ENST00000291552 ANKARQ7Z5J8 1434 aa36.95■■■■□ 3.51
U2AF1-201ENST00000291552 USP21Q9UK80 565 aa36.95■■■■□ 3.51
U2AF1-201ENST00000291552 ATRNO75882 1429 aa36.94■■■■□ 3.5
U2AF1-201ENST00000291552 ABCA3Q99758 1704 aa36.94■■■■□ 3.5
U2AF1-201ENST00000291552 KRT28Q7Z3Y7 464 aa36.94■■■■□ 3.5
U2AF1-201ENST00000291552 STAC3Q96MF2 364 aa36.93■■■■□ 3.5
U2AF1-201ENST00000291552 TNS3Q68CZ2 1445 aa36.93■■■■□ 3.5
U2AF1-201ENST00000291552 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.92■■■■□ 3.5
U2AF1-201ENST00000291552 BCL9LQ86UU0 1499 aa36.92■■■■□ 3.5
U2AF1-201ENST00000291552 HIRIP3Q9BW71 556 aaPredicted RBP36.9■■■■□ 3.5
U2AF1-201ENST00000291552 TRPM3Q9HCF6 1732 aaPredicted RBP36.9■■■■□ 3.5
U2AF1-201ENST00000291552 KIAA1210Q9ULL0 1709 aa36.89■■■■□ 3.5
U2AF1-201ENST00000291552 TULP4Q9NRJ4 1543 aa36.89■■■■□ 3.5
U2AF1-201ENST00000291552 MINK1Q8N4C8 1332 aaPredicted RBP36.87■■■■□ 3.49
U2AF1-201ENST00000291552 TRPC5Q9UL62 973 aaPredicted RBP36.87■■■■□ 3.49
U2AF1-201ENST00000291552 PRR36Q9H6K5 1346 aa36.86■■■■□ 3.49
U2AF1-201ENST00000291552 SBNO1A3KN83 1393 aa36.85■■■■□ 3.49
U2AF1-201ENST00000291552 SLIT2O94813 1529 aa36.83■■■■□ 3.49
U2AF1-201ENST00000291552 PMFBP1Q8TBY8 1022 aa36.82■■■■□ 3.48
U2AF1-201ENST00000291552 ALS2Q96Q42 1657 aa36.81■■■■□ 3.48
U2AF1-201ENST00000291552 PLCH1Q4KWH8 1693 aa36.8■■■■□ 3.48
U2AF1-201ENST00000291552 PSME1Q06323 249 aa36.79■■■■□ 3.48
U2AF1-201ENST00000291552 WASLO00401 505 aaPredicted RBP36.78■■■■□ 3.48
U2AF1-201ENST00000291552 ITSN1Q15811 1721 aa36.78■■■■□ 3.48
U2AF1-201ENST00000291552 EIF3AQ14152 1382 aaKnown RBP36.78■■■■□ 3.48
U2AF1-201ENST00000291552 GLI3P10071 1580 aa36.76■■■■□ 3.48
U2AF1-201ENST00000291552 CABLES1Q8TDN4 633 aa36.76■■■■□ 3.48
U2AF1-201ENST00000291552 ATP7BP35670 1465 aa36.75■■■■□ 3.47
U2AF1-201ENST00000291552 ARHGEF10O15013 1369 aa36.75■■■■□ 3.47
U2AF1-201ENST00000291552 NWD2Q9ULI1 1742 aa36.73■■■■□ 3.47
U2AF1-201ENST00000291552 CRYBG1Q9Y4K1 1723 aa36.73■■■■□ 3.47
U2AF1-201ENST00000291552 TOPAZ1Q8N9V7 1692 aa36.71■■■■□ 3.47
U2AF1-201ENST00000291552 EP400Q96L91 3159 aa36.69■■■■□ 3.46
U2AF1-201ENST00000291552 PLEKHG5O94827 1062 aa36.69■■■■□ 3.46
U2AF1-201ENST00000291552 RALGAPBQ86X10 1494 aa36.69■■■■□ 3.46
U2AF1-201ENST00000291552 LMOD2Q6P5Q4 547 aa36.68■■■■□ 3.46
U2AF1-201ENST00000291552 UNC5CLQ8IV45 518 aa36.68■■■■□ 3.46
U2AF1-201ENST00000291552 GJD4Q96KN9 370 aaPredicted RBP36.68■■■■□ 3.46
U2AF1-201ENST00000291552 ATAD2Q6PL18 1390 aa36.66■■■■□ 3.46
U2AF1-201ENST00000291552 NBPF1Q3BBV0 1214 aa36.66■■■■□ 3.46
U2AF1-201ENST00000291552 GPRASP1Q5JY77 1395 aa36.66■■■■□ 3.46
U2AF1-201ENST00000291552 BRWD3Q6RI45 1802 aa36.64■■■■□ 3.46
U2AF1-201ENST00000291552 NRAPQ86VF7 1730 aa36.64■■■■□ 3.46
U2AF1-201ENST00000291552 HAP1P54257 671 aaPredicted RBP36.63■■■■□ 3.45
U2AF1-201ENST00000291552 NUDT16Q96DE0 195 aaKnown RBP36.6■■■■□ 3.45
U2AF1-201ENST00000291552 NGDNQ8NEJ9 315 aaKnown RBP36.57■■■■□ 3.44
U2AF1-201ENST00000291552 CDK19Q9BWU1 502 aa36.57■■■■□ 3.44
U2AF1-201ENST00000291552 COL14A1Q05707 1796 aaKnown RBP36.57■■■■□ 3.44
U2AF1-201ENST00000291552 QRICH2Q9H0J4 1663 aa36.57■■■■□ 3.44
U2AF1-201ENST00000291552 FAM83GA6ND36 823 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms