RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 RUNDC1Q96C34 613 aa26.14■■□□□ 1.78
TMED4-201ENST00000289577 SETBP1Q9Y6X0 1596 aa26.13■■□□□ 1.77
TMED4-201ENST00000289577 KIF3BO15066 747 aa26.12■■□□□ 1.77
TMED4-201ENST00000289577 EFCAB6Q5THR3 1501 aa26.12■■□□□ 1.77
TMED4-201ENST00000289577 MROH2AA6NES4 1674 aa26.11■■□□□ 1.77
TMED4-201ENST00000289577 WDR63Q8IWG1 891 aa26.11■■□□□ 1.77
TMED4-201ENST00000289577 NSD3Q9BZ95 1437 aa26.11■■□□□ 1.77
TMED4-201ENST00000289577 ABCA9Q8IUA7 1624 aa26.11■■□□□ 1.77
TMED4-201ENST00000289577 MORC1Q86VD1 984 aa26.09■■□□□ 1.77
TMED4-201ENST00000289577 PCDHB15Q9Y5E8 787 aa26.09■■□□□ 1.77
TMED4-201ENST00000289577 TCP11L2Q8N4U5 519 aa26.08■■□□□ 1.77
TMED4-201ENST00000289577 ZC3H13Q5T200 1668 aaKnown RBP26.08■■□□□ 1.77
TMED4-201ENST00000289577 USP32Q8NFA0 1604 aa26.08■■□□□ 1.77
TMED4-201ENST00000289577 CCDC27Q2M243 656 aa26.08■■□□□ 1.77
TMED4-201ENST00000289577 RLBP1P12271 317 aa26.07■■□□□ 1.76
TMED4-201ENST00000289577 FANCAO15360 1455 aa26.06■■□□□ 1.76
TMED4-201ENST00000289577 NCBP3Q53F19 620 aaKnown RBP26.06■■□□□ 1.76
TMED4-201ENST00000289577 ANTXR1Q9H6X2 564 aa26.06■■□□□ 1.76
TMED4-201ENST00000289577 TBC1D32Q96NH3 1257 aa26.05■■□□□ 1.76
TMED4-201ENST00000289577 RRP7AQ9Y3A4 280 aaKnown RBP26.05■■□□□ 1.76
TMED4-201ENST00000289577 ADGRB3O60242 1522 aa26.05■■□□□ 1.76
TMED4-201ENST00000289577 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
TMED4-201ENST00000289577 PPRC1Q5VV67 1664 aaKnown RBP26.04■■□□□ 1.76
TMED4-201ENST00000289577 LMTK2Q8IWU2 1503 aa26.04■■□□□ 1.76
TMED4-201ENST00000289577 NEUROD2Q15784 382 aa26.03■■□□□ 1.76
TMED4-201ENST00000289577 PDZRN3Q9UPQ7 1066 aa26.03■■□□□ 1.76
TMED4-201ENST00000289577 QRICH2Q9H0J4 1663 aa26.02■■□□□ 1.76
TMED4-201ENST00000289577 TNNQ9UQP3 1299 aa26.02■■□□□ 1.76
TMED4-201ENST00000289577 NOS1P29475 1434 aa26.02■■□□□ 1.76
TMED4-201ENST00000289577 SLC12A5Q9H2X9 1139 aa26.01■■□□□ 1.75
TMED4-201ENST00000289577 UPF2Q9HAU5 1272 aaKnown RBP26.01■■□□□ 1.75
TMED4-201ENST00000289577 POGKQ9P215 609 aa26.01■■□□□ 1.75
TMED4-201ENST00000289577 FAM43AQ8N2R8 423 aa26■■□□□ 1.75
TMED4-201ENST00000289577 RWDD1Q9H446 243 aaPredicted RBP26■■□□□ 1.75
TMED4-201ENST00000289577 ADGRB1O14514 1584 aa25.99■■□□□ 1.75
TMED4-201ENST00000289577 SLKQ9H2G2 1235 aaPredicted RBP25.99■■□□□ 1.75
TMED4-201ENST00000289577 ADGRL1O94910 1474 aa25.99■■□□□ 1.75
TMED4-201ENST00000289577 PRKCSHP14314 528 aaPredicted RBP25.98■■□□□ 1.75
TMED4-201ENST00000289577 TNNT2P45379 298 aaPredicted RBP25.98■■□□□ 1.75
TMED4-201ENST00000289577 C14orf93Q9H972 538 aaKnown RBP25.98■■□□□ 1.75
TMED4-201ENST00000289577 MTHFSP49914 203 aa25.98■■□□□ 1.75
TMED4-201ENST00000289577 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.98■■□□□ 1.75
TMED4-201ENST00000289577 PPLO60437 1756 aa25.96■■□□□ 1.75
TMED4-201ENST00000289577 TBC1D2Q9BYX2 928 aa25.96■■□□□ 1.75
TMED4-201ENST00000289577 MYH16Q9H6N6 1097 aa25.96■■□□□ 1.75
TMED4-201ENST00000289577 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
TMED4-201ENST00000289577 TRAK1Q9UPV9 953 aa25.96■■□□□ 1.75
TMED4-201ENST00000289577 BCL2L13Q9BXK5 485 aa25.95■■□□□ 1.75
TMED4-201ENST00000289577 ADGRB2O60241 1585 aa25.95■■□□□ 1.74
TMED4-201ENST00000289577 MVPQ14764 893 aaKnown RBP25.95■■□□□ 1.74
TMED4-201ENST00000289577 KIDINS220Q9ULH0 1771 aa25.93■■□□□ 1.74
TMED4-201ENST00000289577 PUS7Q96PZ0 661 aaKnown RBP25.92■■□□□ 1.74
TMED4-201ENST00000289577 NSD2O96028 1365 aa25.91■■□□□ 1.74
TMED4-201ENST00000289577 CT47B1P0C2W7 299 aaPredicted RBP25.91■■□□□ 1.74
TMED4-201ENST00000289577 ZKSCAN2Q63HK3 967 aa25.9■■□□□ 1.74
TMED4-201ENST00000289577 L1TD1Q5T7N2 865 aaKnown RBP25.89■■□□□ 1.74
TMED4-201ENST00000289577 DZIP1LQ8IYY4 767 aaKnown RBP25.87■■□□□ 1.73
TMED4-201ENST00000289577 ANKRD36BQ8N2N9 1353 aa25.87■■□□□ 1.73
TMED4-201ENST00000289577 RPGRIP1LQ68CZ1 1315 aa25.86■■□□□ 1.73
TMED4-201ENST00000289577 NPATQ14207 1427 aa25.85■■□□□ 1.73
TMED4-201ENST00000289577 CHGAP10645 457 aaKnown RBP25.84■■□□□ 1.73
TMED4-201ENST00000289577 HDAC1Q13547 482 aaPredicted RBP25.84■■□□□ 1.73
TMED4-201ENST00000289577 TMEM132EQ6IEE7 984 aa25.84■■□□□ 1.73
TMED4-201ENST00000289577 U2AF1L5P0DN76 240 aaPredicted RBP25.84■■□□□ 1.73
TMED4-201ENST00000289577 U2AF1Q01081 240 aaKnown RBP eCLIP25.84■■□□□ 1.73
TMED4-201ENST00000289577 TULP4Q9NRJ4 1543 aa25.84■■□□□ 1.73
TMED4-201ENST00000289577 FTSJ3Q8IY81 847 aaKnown RBP25.83■■□□□ 1.73
TMED4-201ENST00000289577 GLI2P10070 1586 aa25.82■■□□□ 1.72
TMED4-201ENST00000289577 EVC2Q86UK5 1308 aa25.81■■□□□ 1.72
TMED4-201ENST00000289577 C22orf23Q9BZE7 217 aa25.81■■□□□ 1.72
TMED4-201ENST00000289577 RSPH6AQ9H0K4 717 aa25.81■■□□□ 1.72
TMED4-201ENST00000289577 ARHGEF28Q8N1W1 1705 aaKnown RBP25.8■■□□□ 1.72
TMED4-201ENST00000289577 MCM4P33991 863 aa25.8■■□□□ 1.72
TMED4-201ENST00000289577 PLEKHF1Q96S99 279 aa25.79■■□□□ 1.72
TMED4-201ENST00000289577 TRIM27P14373 513 aa25.79■■□□□ 1.72
TMED4-201ENST00000289577 CD109Q6YHK3 1445 aa25.78■■□□□ 1.72
TMED4-201ENST00000289577 FSD2A1L4K1 749 aa25.78■■□□□ 1.72
TMED4-201ENST00000289577 TSR2Q969E8 191 aaKnown RBP25.78■■□□□ 1.72
TMED4-201ENST00000289577 DDX19BQ9UMR2 479 aa25.78■■□□□ 1.72
TMED4-201ENST00000289577 SMC4Q9NTJ3 1288 aa25.78■■□□□ 1.72
TMED4-201ENST00000289577 EXOSC9Q06265 439 aaKnown RBP25.77■■□□□ 1.72
TMED4-201ENST00000289577 SMC5Q8IY18 1101 aa25.77■■□□□ 1.72
TMED4-201ENST00000289577 CHMP5Q9NZZ3 219 aa25.76■■□□□ 1.71
TMED4-201ENST00000289577 TRIM35Q9UPQ4 493 aa25.76■■□□□ 1.71
TMED4-201ENST00000289577 COL3A1P02461 1466 aaPredicted RBP25.76■■□□□ 1.71
TMED4-201ENST00000289577 SSH1Q8WYL5 1049 aa25.75■■□□□ 1.71
TMED4-201ENST00000289577 IL16Q14005 1332 aa25.75■■□□□ 1.71
TMED4-201ENST00000289577 TMPOP42166 694 aaKnown RBP25.75■■□□□ 1.71
TMED4-201ENST00000289577 ATF7IPQ6VMQ6 1270 aa25.75■■□□□ 1.71
TMED4-201ENST00000289577 FRMPD1Q5SYB0 1578 aa25.75■■□□□ 1.71
TMED4-201ENST00000289577 CFAP65Q6ZU64 1925 aaKnown RBP25.74■■□□□ 1.71
TMED4-201ENST00000289577 HECW2Q9P2P5 1572 aa25.74■■□□□ 1.71
TMED4-201ENST00000289577 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
TMED4-201ENST00000289577 MFAP1P55081 439 aaKnown RBP25.73■■□□□ 1.71
TMED4-201ENST00000289577 RRAGDQ9NQL2 400 aaPredicted RBP25.72■■□□□ 1.71
TMED4-201ENST00000289577 XRCC6P12956 609 aaKnown RBP eCLIP25.72■■□□□ 1.71
TMED4-201ENST00000289577 ASXL2Q76L83 1435 aa25.71■■□□□ 1.71
TMED4-201ENST00000289577 GOLGA6L3A6NEY3 463 aa25.71■■□□□ 1.71
TMED4-201ENST00000289577 ITPRIPQ8IWB1 547 aa25.71■■□□□ 1.71
TMED4-201ENST00000289577 SPRYD3Q8NCJ5 442 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms