RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 TET3O43151 1660 aa23.9■■□□□ 1.42
CNIH3-201ENST00000272133 SHPRHQ149N8 1683 aa23.9■■□□□ 1.42
CNIH3-201ENST00000272133 ATP7AQ04656 1500 aa23.9■■□□□ 1.42
CNIH3-201ENST00000272133 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
CNIH3-201ENST00000272133 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.42
CNIH3-201ENST00000272133 DEPDC5O75140 1603 aa23.89■■□□□ 1.41
CNIH3-201ENST00000272133 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.41
CNIH3-201ENST00000272133 UPF2Q9HAU5 1272 aaKnown RBP23.89■■□□□ 1.41
CNIH3-201ENST00000272133 TCP11L2Q8N4U5 519 aa23.88■■□□□ 1.41
CNIH3-201ENST00000272133 TBC1D2Q9BYX2 928 aa23.88■■□□□ 1.41
CNIH3-201ENST00000272133 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
CNIH3-201ENST00000272133 RUNDC1Q96C34 613 aa23.87■■□□□ 1.41
CNIH3-201ENST00000272133 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
CNIH3-201ENST00000272133 NSD3Q9BZ95 1437 aa23.86■■□□□ 1.41
CNIH3-201ENST00000272133 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
CNIH3-201ENST00000272133 MYOM2P54296 1465 aa23.84■■□□□ 1.41
CNIH3-201ENST00000272133 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
CNIH3-201ENST00000272133 KANK1Q14678 1352 aa23.83■■□□□ 1.41
CNIH3-201ENST00000272133 KIF3BO15066 747 aa23.82■■□□□ 1.4
CNIH3-201ENST00000272133 AAMPQ13685 434 aa23.82■■□□□ 1.4
CNIH3-201ENST00000272133 SPRYD3Q8NCJ5 442 aa23.82■■□□□ 1.4
CNIH3-201ENST00000272133 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
CNIH3-201ENST00000272133 ARXQ96QS3 562 aa23.81■■□□□ 1.4
CNIH3-201ENST00000272133 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
CNIH3-201ENST00000272133 VWDEQ8N2E2 1590 aa23.81■■□□□ 1.4
CNIH3-201ENST00000272133 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
CNIH3-201ENST00000272133 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
CNIH3-201ENST00000272133 WDR63Q8IWG1 891 aa23.8■■□□□ 1.4
CNIH3-201ENST00000272133 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
CNIH3-201ENST00000272133 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
CNIH3-201ENST00000272133 NEURL4Q96JN8 1562 aa23.79■■□□□ 1.4
CNIH3-201ENST00000272133 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
CNIH3-201ENST00000272133 SBNO2Q9Y2G9 1366 aa23.79■■□□□ 1.4
CNIH3-201ENST00000272133 L1TD1Q5T7N2 865 aaKnown RBP23.79■■□□□ 1.4
CNIH3-201ENST00000272133 RRAGDQ9NQL2 400 aaPredicted RBP23.78■■□□□ 1.4
CNIH3-201ENST00000272133 MTHFSP49914 203 aa23.77■■□□□ 1.4
CNIH3-201ENST00000272133 TRAK1Q9UPV9 953 aa23.76■■□□□ 1.39
CNIH3-201ENST00000272133 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
CNIH3-201ENST00000272133 KIF1BO60333 1816 aa23.76■■□□□ 1.39
CNIH3-201ENST00000272133 MROH1Q8NDA8 1641 aa23.76■■□□□ 1.39
CNIH3-201ENST00000272133 IFT172Q9UG01 1749 aa23.76■■□□□ 1.39
CNIH3-201ENST00000272133 MVPQ14764 893 aaKnown RBP23.75■■□□□ 1.39
CNIH3-201ENST00000272133 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
CNIH3-201ENST00000272133 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
CNIH3-201ENST00000272133 GZF1Q9H116 711 aaPredicted RBP23.72■■□□□ 1.39
CNIH3-201ENST00000272133 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
CNIH3-201ENST00000272133 NOS1P29475 1434 aa23.72■■□□□ 1.39
CNIH3-201ENST00000272133 MCM4P33991 863 aa23.72■■□□□ 1.39
CNIH3-201ENST00000272133 MFAP1P55081 439 aaKnown RBP23.72■■□□□ 1.39
CNIH3-201ENST00000272133 FTSJ3Q8IY81 847 aaKnown RBP23.72■■□□□ 1.39
CNIH3-201ENST00000272133 MYH16Q9H6N6 1097 aa23.71■■□□□ 1.39
CNIH3-201ENST00000272133 XRCC6P12956 609 aaKnown RBP eCLIP23.71■■□□□ 1.39
CNIH3-201ENST00000272133 C22orf23Q9BZE7 217 aa23.7■■□□□ 1.38
CNIH3-201ENST00000272133 ZKSCAN2Q63HK3 967 aa23.7■■□□□ 1.38
CNIH3-201ENST00000272133 DZIP1LQ8IYY4 767 aaKnown RBP23.69■■□□□ 1.38
CNIH3-201ENST00000272133 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
CNIH3-201ENST00000272133 GOLGA6L3A6NEY3 463 aa23.69■■□□□ 1.38
CNIH3-201ENST00000272133 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
CNIH3-201ENST00000272133 TSR2Q969E8 191 aaKnown RBP23.69■■□□□ 1.38
CNIH3-201ENST00000272133 POGZQ7Z3K3 1410 aa23.68■■□□□ 1.38
CNIH3-201ENST00000272133 UBE2Q2Q8WVN8 375 aa23.68■■□□□ 1.38
CNIH3-201ENST00000272133 CFAP74Q9C0B2 1584 aa23.68■■□□□ 1.38
CNIH3-201ENST00000272133 QRICH2Q9H0J4 1663 aa23.68■■□□□ 1.38
CNIH3-201ENST00000272133 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
CNIH3-201ENST00000272133 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
CNIH3-201ENST00000272133 EFCAB6Q5THR3 1501 aa23.68■■□□□ 1.38
CNIH3-201ENST00000272133 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
CNIH3-201ENST00000272133 PANK2Q9BZ23 570 aa23.67■■□□□ 1.38
CNIH3-201ENST00000272133 FSD2A1L4K1 749 aa23.67■■□□□ 1.38
CNIH3-201ENST00000272133 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
CNIH3-201ENST00000272133 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
CNIH3-201ENST00000272133 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
CNIH3-201ENST00000272133 SMC4Q9NTJ3 1288 aa23.64■■□□□ 1.38
CNIH3-201ENST00000272133 CHMP5Q9NZZ3 219 aa23.64■■□□□ 1.38
CNIH3-201ENST00000272133 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.38
CNIH3-201ENST00000272133 TRIM27P14373 513 aa23.64■■□□□ 1.37
CNIH3-201ENST00000272133 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
CNIH3-201ENST00000272133 USP32Q8NFA0 1604 aa23.63■■□□□ 1.37
CNIH3-201ENST00000272133 MLH3Q9UHC1 1453 aa23.63■■□□□ 1.37
CNIH3-201ENST00000272133 ITPRIPQ8IWB1 547 aa23.62■■□□□ 1.37
CNIH3-201ENST00000272133 TRAK2O60296 914 aa23.62■■□□□ 1.37
CNIH3-201ENST00000272133 EXOSC9Q06265 439 aaKnown RBP23.62■■□□□ 1.37
CNIH3-201ENST00000272133 ADGRB3O60242 1522 aa23.62■■□□□ 1.37
CNIH3-201ENST00000272133 RAPGEF3O95398 923 aa23.61■■□□□ 1.37
CNIH3-201ENST00000272133 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
CNIH3-201ENST00000272133 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
CNIH3-201ENST00000272133 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
CNIH3-201ENST00000272133 HDAC1Q13547 482 aaPredicted RBP23.6■■□□□ 1.37
CNIH3-201ENST00000272133 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
CNIH3-201ENST00000272133 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
CNIH3-201ENST00000272133 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
CNIH3-201ENST00000272133 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
CNIH3-201ENST00000272133 SSH1Q8WYL5 1049 aa23.59■■□□□ 1.37
CNIH3-201ENST00000272133 NEO1Q92859 1461 aa23.58■■□□□ 1.37
CNIH3-201ENST00000272133 DDX19BQ9UMR2 479 aa23.58■■□□□ 1.37
CNIH3-201ENST00000272133 HSCBQ8IWL3 235 aa23.57■■□□□ 1.36
CNIH3-201ENST00000272133 CT47B1P0C2W7 299 aaPredicted RBP23.57■■□□□ 1.36
CNIH3-201ENST00000272133 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
CNIH3-201ENST00000272133 ZNF692Q9BU19 519 aaPredicted RBP23.57■■□□□ 1.36
CNIH3-201ENST00000272133 ATF7IPQ6VMQ6 1270 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms