RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TXNDC2Q86VQ3 553 aa27.87■■■□□ 2.05
LYSMD2-201ENST00000267838 NLRP13Q86W25 1043 aa27.87■■■□□ 2.05
LYSMD2-201ENST00000267838 EID1Q9Y6B2 187 aa27.87■■■□□ 2.05
LYSMD2-201ENST00000267838 KNDC1Q76NI1 1749 aa27.87■■■□□ 2.05
LYSMD2-201ENST00000267838 HNRNPUQ00839 825 aaKnown RBP eCLIP27.86■■■□□ 2.05
LYSMD2-201ENST00000267838 THEMISQ8N1K5 641 aaPredicted RBP27.86■■■□□ 2.05
LYSMD2-201ENST00000267838 ADAMTS13Q76LX8 1427 aa27.86■■■□□ 2.05
LYSMD2-201ENST00000267838 MINK1Q8N4C8 1332 aaPredicted RBP27.86■■■□□ 2.05
LYSMD2-201ENST00000267838 CEP170BQ9Y4F5 1589 aaPredicted RBP27.85■■■□□ 2.05
LYSMD2-201ENST00000267838 CARD14Q9BXL6 1004 aa27.83■■■□□ 2.05
LYSMD2-201ENST00000267838 SLC12A5Q9H2X9 1139 aa27.83■■■□□ 2.05
LYSMD2-201ENST00000267838 CABP2Q9NPB3 220 aa27.83■■■□□ 2.05
LYSMD2-201ENST00000267838 MYT1Q01538 1121 aa27.82■■■□□ 2.04
LYSMD2-201ENST00000267838 PNISRQ8TF01 805 aaKnown RBP27.82■■■□□ 2.04
LYSMD2-201ENST00000267838 TECPR2O15040 1411 aa27.82■■■□□ 2.04
LYSMD2-201ENST00000267838 SRPK2P78362 688 aaKnown RBP27.81■■■□□ 2.04
LYSMD2-201ENST00000267838 PLEKHH1Q9ULM0 1364 aa27.8■■■□□ 2.04
LYSMD2-201ENST00000267838 CPS1P31327 1500 aa27.8■■■□□ 2.04
LYSMD2-201ENST00000267838 WAPLQ7Z5K2 1190 aa27.8■■■□□ 2.04
LYSMD2-201ENST00000267838 MED14O60244 1454 aa27.79■■■□□ 2.04
LYSMD2-201ENST00000267838 SIRT1Q96EB6 747 aa27.78■■■□□ 2.04
LYSMD2-201ENST00000267838 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
LYSMD2-201ENST00000267838 FAM135BQ49AJ0 1406 aa27.78■■■□□ 2.04
LYSMD2-201ENST00000267838 ATAD2Q6PL18 1390 aa27.78■■■□□ 2.04
LYSMD2-201ENST00000267838 ZNF142P52746 1687 aaPredicted RBP27.77■■■□□ 2.04
LYSMD2-201ENST00000267838 NSD3Q9BZ95 1437 aa27.76■■■□□ 2.04
LYSMD2-201ENST00000267838 ANKRD36BQ8N2N9 1353 aa27.76■■■□□ 2.03
LYSMD2-201ENST00000267838 CDK19Q9BWU1 502 aa27.75■■■□□ 2.03
LYSMD2-201ENST00000267838 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
LYSMD2-201ENST00000267838 PPP2R1AP30153 589 aa27.73■■■□□ 2.03
LYSMD2-201ENST00000267838 DIP2AQ14689 1571 aa27.72■■■□□ 2.03
LYSMD2-201ENST00000267838 SLC26A8Q96RN1 970 aa27.71■■■□□ 2.03
LYSMD2-201ENST00000267838 SETD1BQ9UPS6 1966 aaKnown RBP27.71■■■□□ 2.03
LYSMD2-201ENST00000267838 TBX22Q9Y458 520 aa27.7■■■□□ 2.02
LYSMD2-201ENST00000267838 ZBED9Q6R2W3 1325 aa27.68■■■□□ 2.02
LYSMD2-201ENST00000267838 ROBO2Q9HCK4 1378 aa27.68■■■□□ 2.02
LYSMD2-201ENST00000267838 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
LYSMD2-201ENST00000267838 A0A1W2PP64 1363 aa27.66■■■□□ 2.02
LYSMD2-201ENST00000267838 CGNL1Q0VF96 1302 aa27.66■■■□□ 2.02
LYSMD2-201ENST00000267838 WASLO00401 505 aaPredicted RBP27.65■■■□□ 2.02
LYSMD2-201ENST00000267838 TERF2IPQ9NYB0 399 aa27.63■■■□□ 2.01
LYSMD2-201ENST00000267838 CD163L1Q9NR16 1453 aa27.63■■■□□ 2.01
LYSMD2-201ENST00000267838 NSD2O96028 1365 aa27.61■■■□□ 2.01
LYSMD2-201ENST00000267838 ANKLE2Q86XL3 938 aa27.6■■■□□ 2.01
LYSMD2-201ENST00000267838 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
LYSMD2-201ENST00000267838 ADGRB2O60241 1585 aa27.6■■■□□ 2.01
LYSMD2-201ENST00000267838 CABP1Q9NZU7 370 aa27.6■■■□□ 2.01
LYSMD2-201ENST00000267838 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.6■■■□□ 2.01
LYSMD2-201ENST00000267838 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
LYSMD2-201ENST00000267838 HDGFL2Q7Z4V5 671 aaPredicted RBP27.58■■■□□ 2.01
LYSMD2-201ENST00000267838 INSRP06213 1382 aa27.58■■■□□ 2.01
LYSMD2-201ENST00000267838 PTCH1Q13635 1447 aa27.58■■■□□ 2.01
LYSMD2-201ENST00000267838 ATP7BP35670 1465 aa27.57■■■□□ 2
LYSMD2-201ENST00000267838 XRN1Q8IZH2 1706 aaKnown RBP27.57■■■□□ 2
LYSMD2-201ENST00000267838 PIK3R4Q99570 1358 aa27.56■■■□□ 2
LYSMD2-201ENST00000267838 PPIP5K1Q6PFW1 1433 aa27.53■■■□□ 2
LYSMD2-201ENST00000267838 NUDT16Q96DE0 195 aaKnown RBP27.53■■■□□ 2
LYSMD2-201ENST00000267838 BLMP54132 1417 aaPredicted RBP27.52■■■□□ 2
LYSMD2-201ENST00000267838 KDM4FA0A1W2PPD8 638 aa27.51■■□□□ 1.99
LYSMD2-201ENST00000267838 ANKRD26Q9UPS8 1709 aa27.51■■□□□ 1.99
LYSMD2-201ENST00000267838 WDR43Q15061 677 aaKnown RBP eCLIP27.5■■□□□ 1.99
LYSMD2-201ENST00000267838 CCDC61Q9Y6R9 512 aa27.49■■□□□ 1.99
LYSMD2-201ENST00000267838 KIF20BQ96Q89 1820 aa27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 POLR3AO14802 1390 aaPredicted RBP27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 TNNT2P45379 298 aaPredicted RBP27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 CPSF1Q10570 1443 aaKnown RBP27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 ADAMTS8Q9UP79 889 aa27.48■■□□□ 1.99
LYSMD2-201ENST00000267838 PRR36Q9H6K5 1346 aa27.46■■□□□ 1.99
LYSMD2-201ENST00000267838 FYB1O15117 783 aa27.46■■□□□ 1.99
LYSMD2-201ENST00000267838 NEFLP07196 543 aa27.46■■□□□ 1.99
LYSMD2-201ENST00000267838 CHD2O14647 1828 aaKnown RBP27.46■■□□□ 1.99
LYSMD2-201ENST00000267838 TOPAZ1Q8N9V7 1692 aa27.45■■□□□ 1.98
LYSMD2-201ENST00000267838 SENP3-EIF4A1A0A087X0R7 540 aa27.45■■□□□ 1.98
LYSMD2-201ENST00000267838 GGNBP2Q9H3C7 697 aa27.45■■□□□ 1.98
LYSMD2-201ENST00000267838 KCNA6P17658 529 aa27.44■■□□□ 1.98
LYSMD2-201ENST00000267838 NPHP4O75161 1426 aaPredicted RBP27.44■■□□□ 1.98
LYSMD2-201ENST00000267838 AKAP12Q02952 1782 aa27.43■■□□□ 1.98
LYSMD2-201ENST00000267838 NCKAP5LQ9HCH0 1330 aa27.43■■□□□ 1.98
LYSMD2-201ENST00000267838 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
LYSMD2-201ENST00000267838 MON2Q7Z3U7 1717 aa27.43■■□□□ 1.98
LYSMD2-201ENST00000267838 EDC4Q6P2E9 1401 aaKnown RBP27.42■■□□□ 1.98
LYSMD2-201ENST00000267838 MTHFSP49914 203 aa27.39■■□□□ 1.98
LYSMD2-201ENST00000267838 FKBP8Q14318 412 aa27.39■■□□□ 1.98
LYSMD2-201ENST00000267838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.38■■□□□ 1.97
LYSMD2-201ENST00000267838 SMG6Q86US8 1419 aaKnown RBP27.38■■□□□ 1.97
LYSMD2-201ENST00000267838 SHPRHQ149N8 1683 aa27.38■■□□□ 1.97
LYSMD2-201ENST00000267838 ZNF692Q9BU19 519 aaPredicted RBP27.37■■□□□ 1.97
LYSMD2-201ENST00000267838 TSHZ2Q9NRE2 1034 aa27.36■■□□□ 1.97
LYSMD2-201ENST00000267838 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
LYSMD2-201ENST00000267838 PLEKHG3A1L390 1219 aa27.35■■□□□ 1.97
LYSMD2-201ENST00000267838 NUTM2FA1L443 756 aa27.35■■□□□ 1.97
LYSMD2-201ENST00000267838 NUDCQ9Y266 331 aa27.33■■□□□ 1.97
LYSMD2-201ENST00000267838 SALL2Q9Y467 1007 aaPredicted RBP27.33■■□□□ 1.97
LYSMD2-201ENST00000267838 NKTRP30414 1462 aaKnown RBP27.33■■□□□ 1.97
LYSMD2-201ENST00000267838 ACEP12821 1306 aa27.3■■□□□ 1.96
LYSMD2-201ENST00000267838 NRKQ7Z2Y5 1582 aa27.3■■□□□ 1.96
LYSMD2-201ENST00000267838 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
LYSMD2-201ENST00000267838 PDE3BQ13370 1112 aa27.3■■□□□ 1.96
LYSMD2-201ENST00000267838 NALCNQ8IZF0 1738 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms