RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 MRE11P49959 708 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
SNX25-201ENST00000264694 MYH16Q9H6N6 1097 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 PLXNC1O60486 1568 aa16.76■□□□□ 0.27
SNX25-201ENST00000264694 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
SNX25-201ENST00000264694 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
SNX25-201ENST00000264694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNX25-201ENST00000264694 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
SNX25-201ENST00000264694 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
SNX25-201ENST00000264694 HSP90AA2PQ14568 343 aaPredicted RBP16.74■□□□□ 0.27
SNX25-201ENST00000264694 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
SNX25-201ENST00000264694 MTHFSP49914 203 aa16.74■□□□□ 0.27
SNX25-201ENST00000264694 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
SNX25-201ENST00000264694 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
SNX25-201ENST00000264694 NSD3Q9BZ95 1437 aa16.74■□□□□ 0.27
SNX25-201ENST00000264694 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
SNX25-201ENST00000264694 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
SNX25-201ENST00000264694 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
SNX25-201ENST00000264694 AAMPQ13685 434 aa16.72■□□□□ 0.27
SNX25-201ENST00000264694 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
SNX25-201ENST00000264694 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
SNX25-201ENST00000264694 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
SNX25-201ENST00000264694 ESPNB1AK53 854 aa16.72■□□□□ 0.27
SNX25-201ENST00000264694 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
SNX25-201ENST00000264694 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
SNX25-201ENST00000264694 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNX25-201ENST00000264694 CEP152O94986 1710 aa16.71■□□□□ 0.27
SNX25-201ENST00000264694 TRAPPC8Q9Y2L5 1435 aa16.71■□□□□ 0.27
SNX25-201ENST00000264694 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
SNX25-201ENST00000264694 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
SNX25-201ENST00000264694 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.26
SNX25-201ENST00000264694 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.26
SNX25-201ENST00000264694 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
SNX25-201ENST00000264694 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
SNX25-201ENST00000264694 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
SNX25-201ENST00000264694 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
SNX25-201ENST00000264694 TRIM27P14373 513 aa16.69■□□□□ 0.26
SNX25-201ENST00000264694 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
SNX25-201ENST00000264694 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
SNX25-201ENST00000264694 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
SNX25-201ENST00000264694 CHGAP10645 457 aaKnown RBP16.68■□□□□ 0.26
SNX25-201ENST00000264694 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
SNX25-201ENST00000264694 TRPM2O94759 1503 aa16.68■□□□□ 0.26
SNX25-201ENST00000264694 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
SNX25-201ENST00000264694 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
SNX25-201ENST00000264694 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
SNX25-201ENST00000264694 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
SNX25-201ENST00000264694 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
SNX25-201ENST00000264694 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
SNX25-201ENST00000264694 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
SNX25-201ENST00000264694 UGGT1Q9NYU2 1555 aa16.66■□□□□ 0.26
SNX25-201ENST00000264694 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
SNX25-201ENST00000264694 KIF3BO15066 747 aa16.65■□□□□ 0.26
SNX25-201ENST00000264694 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
SNX25-201ENST00000264694 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
SNX25-201ENST00000264694 PTPRTO14522 1441 aa16.65■□□□□ 0.26
SNX25-201ENST00000264694 RRP9O43818 475 aaKnown RBP16.64■□□□□ 0.25
SNX25-201ENST00000264694 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
SNX25-201ENST00000264694 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
SNX25-201ENST00000264694 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
SNX25-201ENST00000264694 CCDC27Q2M243 656 aa16.63■□□□□ 0.25
SNX25-201ENST00000264694 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
SNX25-201ENST00000264694 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
SNX25-201ENST00000264694 CD2BP2O95400 341 aaKnown RBP16.63■□□□□ 0.25
SNX25-201ENST00000264694 DDIT3P35638 169 aa16.63■□□□□ 0.25
SNX25-201ENST00000264694 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
SNX25-201ENST00000264694 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
SNX25-201ENST00000264694 GBP4Q96PP9 640 aa16.62■□□□□ 0.25
SNX25-201ENST00000264694 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
SNX25-201ENST00000264694 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
SNX25-201ENST00000264694 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
SNX25-201ENST00000264694 PLCH2O75038 1416 aa16.6■□□□□ 0.25
SNX25-201ENST00000264694 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
SNX25-201ENST00000264694 RBM25P49756 843 aaKnown RBP16.6■□□□□ 0.25
SNX25-201ENST00000264694 NCOA3Q9Y6Q9 1424 aa16.59■□□□□ 0.25
SNX25-201ENST00000264694 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
SNX25-201ENST00000264694 KANK1Q14678 1352 aa16.59■□□□□ 0.25
SNX25-201ENST00000264694 SSFA2P28290 1259 aa16.58■□□□□ 0.25
SNX25-201ENST00000264694 SNX21Q969T3 373 aa16.58■□□□□ 0.24
SNX25-201ENST00000264694 ZBTB40Q9NUA8 1239 aa16.58■□□□□ 0.24
SNX25-201ENST00000264694 NUCB1Q02818 461 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 C1orf115Q9H7X2 142 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 ISY1Q9ULR0 285 aaKnown RBP16.57■□□□□ 0.24
SNX25-201ENST00000264694 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNX25-201ENST00000264694 KIF2CQ99661 725 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
SNX25-201ENST00000264694 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 TRIM35Q9UPQ4 493 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
SNX25-201ENST00000264694 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
SNX25-201ENST00000264694 NOS1P29475 1434 aa16.56■□□□□ 0.24
SNX25-201ENST00000264694 ABCC1P33527 1531 aa16.55■□□□□ 0.24
SNX25-201ENST00000264694 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
SNX25-201ENST00000264694 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
SNX25-201ENST00000264694 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
SNX25-201ENST00000264694 NASPP49321 788 aaPredicted RBP16.54■□□□□ 0.24
SNX25-201ENST00000264694 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms