RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 XRN1Q8IZH2 1706 aaKnown RBP7.89□□□□□ -1.15
ITCH-201ENST00000262650 NRXN3Q9Y4C0 1643 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 CC2D2BQ6DHV5 1058 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 SLC52A1Q9NWF4 448 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 LAMC1P11047 1609 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 RAD21O60216 631 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 KCTD17Q8N5Z5 321 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
ITCH-201ENST00000262650 ANKRD50Q9ULJ7 1429 aa7.88□□□□□ -1.15
ITCH-201ENST00000262650 SHPRHQ149N8 1683 aa7.87□□□□□ -1.15
ITCH-201ENST00000262650 SETBP1Q9Y6X0 1596 aa7.87□□□□□ -1.15
ITCH-201ENST00000262650 PIK3R4Q99570 1358 aa7.87□□□□□ -1.15
ITCH-201ENST00000262650 KCNA6P17658 529 aa7.87□□□□□ -1.15
ITCH-201ENST00000262650 AHDC1Q5TGY3 1603 aaPredicted RBP7.87□□□□□ -1.15
ITCH-201ENST00000262650 FAM177A1Q8N128 213 aaPredicted RBP7.87□□□□□ -1.15
ITCH-201ENST00000262650 COL16A1Q07092 1604 aaPredicted RBP7.86□□□□□ -1.15
ITCH-201ENST00000262650 NCLP19338 710 aaKnown RBP7.86□□□□□ -1.15
ITCH-201ENST00000262650 SETD1AO15047 1707 aaKnown RBP7.86□□□□□ -1.15
ITCH-201ENST00000262650 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
ITCH-201ENST00000262650 PRAG1Q86YV5 1406 aa7.86□□□□□ -1.15
ITCH-201ENST00000262650 MTMR7Q9Y216 660 aa7.86□□□□□ -1.15
ITCH-201ENST00000262650 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.85□□□□□ -1.15
ITCH-201ENST00000262650 IDI1Q13907 227 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 TXNDC2Q86VQ3 553 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 RRP7BPQ9NSQ0 103 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 PRDM16Q9HAZ2 1276 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 EID1Q9Y6B2 187 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 ADAMTS13Q76LX8 1427 aa7.85□□□□□ -1.15
ITCH-201ENST00000262650 TRPM2O94759 1503 aa7.84□□□□□ -1.15
ITCH-201ENST00000262650 CHRM1P11229 460 aaPredicted RBP7.84□□□□□ -1.15
ITCH-201ENST00000262650 NHSL1Q5SYE7 1610 aa7.84□□□□□ -1.15
ITCH-201ENST00000262650 RIMS2Q9UQ26 1411 aa7.84□□□□□ -1.16
ITCH-201ENST00000262650 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
ITCH-201ENST00000262650 DCCP43146 1447 aa7.83□□□□□ -1.16
ITCH-201ENST00000262650 TMEM94Q12767 1356 aa7.82□□□□□ -1.16
ITCH-201ENST00000262650 PRDM10Q9NQV6 1147 aa7.82□□□□□ -1.16
ITCH-201ENST00000262650 TBX22Q9Y458 520 aa7.82□□□□□ -1.16
ITCH-201ENST00000262650 KIF1BO60333 1816 aa7.82□□□□□ -1.16
ITCH-201ENST00000262650 ACIN1Q9UKV3 1341 aaKnown RBP7.82□□□□□ -1.16
ITCH-201ENST00000262650 RBM25P49756 843 aaKnown RBP7.82□□□□□ -1.16
ITCH-201ENST00000262650 TEX2Q8IWB9 1127 aa7.81□□□□□ -1.16
ITCH-201ENST00000262650 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
ITCH-201ENST00000262650 FOXD4L4Q8WXT5 416 aaPredicted RBP7.81□□□□□ -1.16
ITCH-201ENST00000262650 NEXMIFQ5QGS0 1516 aa7.81□□□□□ -1.16
ITCH-201ENST00000262650 RRBP1Q9P2E9 1410 aaKnown RBP7.81□□□□□ -1.16
ITCH-201ENST00000262650 CLTCL1P53675 1640 aa7.8□□□□□ -1.16
ITCH-201ENST00000262650 CNPY4Q8N129 248 aa7.8□□□□□ -1.16
ITCH-201ENST00000262650 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.8□□□□□ -1.16
ITCH-201ENST00000262650 PPLO60437 1756 aa7.8□□□□□ -1.16
ITCH-201ENST00000262650 RGS17Q9UGC6 210 aaPredicted RBP7.8□□□□□ -1.16
ITCH-201ENST00000262650 IFT172Q9UG01 1749 aa7.8□□□□□ -1.16
ITCH-201ENST00000262650 HDGFP51858 240 aaKnown RBP7.8□□□□□ -1.16
ITCH-201ENST00000262650 PIP4K2BP78356 416 aa7.79□□□□□ -1.16
ITCH-201ENST00000262650 NALCNQ8IZF0 1738 aa7.78□□□□□ -1.16
ITCH-201ENST00000262650 PTPRUQ92729 1446 aa7.78□□□□□ -1.16
ITCH-201ENST00000262650 MSH6P52701 1360 aa7.77□□□□□ -1.16
ITCH-201ENST00000262650 COL22A1Q8NFW1 1626 aaPredicted RBP7.77□□□□□ -1.17
ITCH-201ENST00000262650 KNDC1Q76NI1 1749 aa7.77□□□□□ -1.17
ITCH-201ENST00000262650 USP35Q9P2H5 1018 aa7.77□□□□□ -1.17
ITCH-201ENST00000262650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.77□□□□□ -1.173e-8■■■□□ 14.6
ITCH-201ENST00000262650 CDK12Q9NYV4 1490 aaPredicted RBP7.76□□□□□ -1.17
ITCH-201ENST00000262650 DEKP35659 375 aaKnown RBP7.76□□□□□ -1.17
ITCH-201ENST00000262650 CHIC2Q9UKJ5 165 aa7.76□□□□□ -1.17
ITCH-201ENST00000262650 JCADQ9P266 1359 aa7.76□□□□□ -1.17
ITCH-201ENST00000262650 NAP1L2Q9ULW6 460 aaPredicted RBP7.76□□□□□ -1.17
ITCH-201ENST00000262650 PLCD4Q9BRC7 762 aa7.75□□□□□ -1.17
ITCH-201ENST00000262650 SETD5Q9C0A6 1442 aa7.75□□□□□ -1.17
ITCH-201ENST00000262650 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
ITCH-201ENST00000262650 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
ITCH-201ENST00000262650 PTCH1Q13635 1447 aa7.75□□□□□ -1.17
ITCH-201ENST00000262650 PPM1GO15355 546 aaPredicted RBP7.75□□□□□ -1.17
ITCH-201ENST00000262650 CCDC27Q2M243 656 aa7.75□□□□□ -1.17
ITCH-201ENST00000262650 MARF1Q9Y4F3 1742 aaKnown RBP7.74□□□□□ -1.17
ITCH-201ENST00000262650 LRP6O75581 1613 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 NAIPQ13075 1403 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 GRIPAP1Q4V328 841 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 SLAIN2Q9P270 581 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 SPATA31A6Q5VVP1 1343 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 MST1RQ04912 1400 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 SPRYD3Q8NCJ5 442 aa7.74□□□□□ -1.17
ITCH-201ENST00000262650 SETQ01105 290 aaPredicted RBP7.73□□□□□ -1.17
ITCH-201ENST00000262650 SLC26A8Q96RN1 970 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 HFM1A2PYH4 1435 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 GLIPR1L2Q4G1C9 344 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 ZNF526Q8TF50 670 aaPredicted RBP7.73□□□□□ -1.17
ITCH-201ENST00000262650 RNF216Q9NWF9 866 aaPredicted RBP7.73□□□□□ -1.17
ITCH-201ENST00000262650 NUP155O75694 1391 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 ADGRL3Q9HAR2 1447 aa7.73□□□□□ -1.17
ITCH-201ENST00000262650 C19orf44Q9H6X5 657 aa7.72□□□□□ -1.17
ITCH-201ENST00000262650 SECISBP2LQ93073 1101 aaKnown RBP7.72□□□□□ -1.17
ITCH-201ENST00000262650 CDC42BPGQ6DT37 1551 aa7.72□□□□□ -1.17
ITCH-201ENST00000262650 FAM50AQ14320 339 aaKnown RBP7.72□□□□□ -1.17
ITCH-201ENST00000262650 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.71□□□□□ -1.18
ITCH-201ENST00000262650 CADPS2Q86UW7 1296 aa7.71□□□□□ -1.18
ITCH-201ENST00000262650 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
ITCH-201ENST00000262650 DIEXFQ68CQ4 756 aaKnown RBP7.7□□□□□ -1.18
ITCH-201ENST00000262650 IPO4Q8TEX9 1081 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms