RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
SREBF1-201ENST00000261646 CDC45O75419 566 aa19.86■□□□□ 0.77
SREBF1-201ENST00000261646 CABP2Q9NPB3 220 aa19.86■□□□□ 0.77
SREBF1-201ENST00000261646 CLCN1P35523 988 aa19.86■□□□□ 0.77
SREBF1-201ENST00000261646 MVPQ14764 893 aaKnown RBP19.85■□□□□ 0.77
SREBF1-201ENST00000261646 UQCRHLA0A096LP55 91 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 UQCRHP07919 91 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 INTS3Q68E01 1043 aaKnown RBP19.84■□□□□ 0.77
SREBF1-201ENST00000261646 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 K7ELQ4 463 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-201ENST00000261646 CHMP3Q9Y3E7 222 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 TNNT3P45378 269 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-201ENST00000261646 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 C1orf115Q9H7X2 142 aa19.84■□□□□ 0.77
SREBF1-201ENST00000261646 CIZ1Q9ULV3 898 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-201ENST00000261646 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.76
SREBF1-201ENST00000261646 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.76
SREBF1-201ENST00000261646 RRAGDQ9NQL2 400 aaPredicted RBP19.83■□□□□ 0.76
SREBF1-201ENST00000261646 ZNF592Q92610 1267 aa19.82■□□□□ 0.76
SREBF1-201ENST00000261646 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
SREBF1-201ENST00000261646 STK31Q9BXU1 1019 aa19.82■□□□□ 0.76
SREBF1-201ENST00000261646 ERBINQ96RT1 1412 aa19.81■□□□□ 0.76
SREBF1-201ENST00000261646 TBC1D32Q96NH3 1257 aa19.81■□□□□ 0.76
SREBF1-201ENST00000261646 NOB1Q9ULX3 412 aaKnown RBP19.81■□□□□ 0.76
SREBF1-201ENST00000261646 PDCL3Q9H2J4 239 aa19.8■□□□□ 0.76
SREBF1-201ENST00000261646 UGGT2Q9NYU1 1516 aa19.8■□□□□ 0.76
SREBF1-201ENST00000261646 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
SREBF1-201ENST00000261646 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-201ENST00000261646 PODXL2Q9NZ53 605 aa19.8■□□□□ 0.76
SREBF1-201ENST00000261646 LMOD3Q0VAK6 560 aa19.8■□□□□ 0.76
SREBF1-201ENST00000261646 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
SREBF1-201ENST00000261646 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
SREBF1-201ENST00000261646 API5Q9BZZ5 524 aaKnown RBP19.79■□□□□ 0.76
SREBF1-201ENST00000261646 ATP6V1DQ9Y5K8 247 aa19.79■□□□□ 0.76
SREBF1-201ENST00000261646 NINLQ9Y2I6 1382 aa19.79■□□□□ 0.76
SREBF1-201ENST00000261646 RABEP1Q15276 862 aa19.79■□□□□ 0.76
SREBF1-201ENST00000261646 RARSP54136 660 aaKnown RBP19.78■□□□□ 0.76
SREBF1-201ENST00000261646 ATF7IPQ6VMQ6 1270 aa19.78■□□□□ 0.76
SREBF1-201ENST00000261646 SEC24BO95487 1268 aa19.78■□□□□ 0.76
SREBF1-201ENST00000261646 NEK4P51957 841 aa19.78■□□□□ 0.76
SREBF1-201ENST00000261646 MBD3O95983 291 aa19.77■□□□□ 0.76
SREBF1-201ENST00000261646 EVC2Q86UK5 1308 aa19.77■□□□□ 0.76
SREBF1-201ENST00000261646 HMOX1P09601 288 aa19.76■□□□□ 0.75
SREBF1-201ENST00000261646 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
SREBF1-201ENST00000261646 XPCQ01831 940 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-201ENST00000261646 WDR63Q8IWG1 891 aa19.76■□□□□ 0.75
SREBF1-201ENST00000261646 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-201ENST00000261646 HTATSF1O43719 755 aaKnown RBP19.76■□□□□ 0.75
SREBF1-201ENST00000261646 CHD1LQ86WJ1 897 aa19.76■□□□□ 0.75
SREBF1-201ENST00000261646 GPATCH8Q9UKJ3 1502 aaKnown RBP19.75■□□□□ 0.75
SREBF1-201ENST00000261646 DIAPH3Q9NSV4 1193 aa19.75■□□□□ 0.75
SREBF1-201ENST00000261646 DHX29Q7Z478 1369 aaKnown RBP19.75■□□□□ 0.75
SREBF1-201ENST00000261646 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
SREBF1-201ENST00000261646 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-201ENST00000261646 SCAPERQ9BY12 1400 aa19.74■□□□□ 0.75
SREBF1-201ENST00000261646 HMGN5P82970 282 aaKnown RBP19.74■□□□□ 0.75
SREBF1-201ENST00000261646 NKTRP30414 1462 aaKnown RBP19.74■□□□□ 0.75
SREBF1-201ENST00000261646 TSPY26PQ9H489 355 aa19.73■□□□□ 0.75
SREBF1-201ENST00000261646 PRDM10Q9NQV6 1147 aa19.73■□□□□ 0.75
SREBF1-201ENST00000261646 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
SREBF1-201ENST00000261646 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SREBF1-201ENST00000261646 IFT57Q9NWB7 429 aa19.73■□□□□ 0.75
SREBF1-201ENST00000261646 GOLGA6L19H0YKK7 550 aa19.72■□□□□ 0.75
SREBF1-201ENST00000261646 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
SREBF1-201ENST00000261646 PCDHB15Q9Y5E8 787 aa19.71■□□□□ 0.75
SREBF1-201ENST00000261646 NUP153P49790 1475 aaKnown RBP19.71■□□□□ 0.75
SREBF1-201ENST00000261646 VPS37CA5D8V6 355 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-201ENST00000261646 PLEKHH2Q8IVE3 1493 aa19.71■□□□□ 0.75
SREBF1-201ENST00000261646 TMEM57Q8N5G2 664 aa19.7■□□□□ 0.74
SREBF1-201ENST00000261646 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
SREBF1-201ENST00000261646 BECN2A8MW95 431 aa19.7■□□□□ 0.74
SREBF1-201ENST00000261646 SYCE3A1L190 88 aa19.69■□□□□ 0.74
SREBF1-201ENST00000261646 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
SREBF1-201ENST00000261646 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
SREBF1-201ENST00000261646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-201ENST00000261646 GNAI1P63096 354 aa19.68■□□□□ 0.74
SREBF1-201ENST00000261646 CWC22Q9HCG8 908 aaKnown RBP19.68■□□□□ 0.74
SREBF1-201ENST00000261646 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
SREBF1-201ENST00000261646 HSP90B1P14625 803 aaKnown RBP19.67■□□□□ 0.74
SREBF1-201ENST00000261646 LTV1Q96GA3 475 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-201ENST00000261646 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
SREBF1-201ENST00000261646 SPC24Q8NBT2 197 aa19.65■□□□□ 0.74
SREBF1-201ENST00000261646 SSH1Q8WYL5 1049 aa19.65■□□□□ 0.74
SREBF1-201ENST00000261646 ADGRF5Q8IZF2 1346 aa19.65■□□□□ 0.74
SREBF1-201ENST00000261646 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.65■□□□□ 0.74
SREBF1-201ENST00000261646 FIBPO43427 364 aa19.64■□□□□ 0.74
SREBF1-201ENST00000261646 RAPGEF3O95398 923 aa19.64■□□□□ 0.74
SREBF1-201ENST00000261646 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
SREBF1-201ENST00000261646 CCDC141Q6ZP82 1450 aa19.64■□□□□ 0.73
SREBF1-201ENST00000261646 CT47B1P0C2W7 299 aaPredicted RBP19.63■□□□□ 0.73
SREBF1-201ENST00000261646 PARD3Q8TEW0 1356 aa19.63■□□□□ 0.73
SREBF1-201ENST00000261646 BICD2Q8TD16 824 aa19.63■□□□□ 0.73
SREBF1-201ENST00000261646 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
SREBF1-201ENST00000261646 NECTIN2Q92692 538 aa19.62■□□□□ 0.73
SREBF1-201ENST00000261646 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
SREBF1-201ENST00000261646 ZHX1Q9UKY1 873 aaPredicted RBP19.62■□□□□ 0.73
SREBF1-201ENST00000261646 TPM4P67936 248 aa19.62■□□□□ 0.73
SREBF1-201ENST00000261646 GPATCH3Q96I76 525 aa19.62■□□□□ 0.73
SREBF1-201ENST00000261646 PLEKHH1Q9ULM0 1364 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms