RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 RBM25P49756 843 aaKnown RBP8.59□□□□□ -1.03
HERC2-201ENST00000261609 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.03
HERC2-201ENST00000261609 TRIM29Q14134 588 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 CPLX1O14810 134 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 PANK1Q8TE04 598 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 OLFM4Q6UX06 510 aa8.59□□□□□ -1.03
HERC2-201ENST00000261609 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.03
HERC2-201ENST00000261609 APAF1O14727 1248 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 DHX8Q14562 1220 aaKnown RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 NOL10Q9BSC4 688 aaKnown RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 CCDC192P0DO97 292 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 RABEP1Q15276 862 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 EIF3JO75822 258 aaKnown RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 CCDC47Q96A33 483 aaKnown RBP8.58□□□□□ -1.04
HERC2-201ENST00000261609 CCDC88BA6NC98 1476 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
HERC2-201ENST00000261609 GTF2F1P35269 517 aaKnown RBP eCLIP8.57□□□□□ -1.04
HERC2-201ENST00000261609 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
HERC2-201ENST00000261609 UBXN4Q92575 508 aa8.57□□□□□ -1.04
HERC2-201ENST00000261609 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
HERC2-201ENST00000261609 ZNF330Q9Y3S2 320 aaPredicted RBP8.57□□□□□ -1.04
HERC2-201ENST00000261609 FAM107BQ9H098 131 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 IBSPP21815 317 aaPredicted RBP8.56□□□□□ -1.04
HERC2-201ENST00000261609 MCM5P33992 734 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 ZRSR2Q15696 482 aaKnown RBP8.56□□□□□ -1.04
HERC2-201ENST00000261609 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 VPS53Q5VIR6 699 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
HERC2-201ENST00000261609 MCM2P49736 904 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 BRD4O60885 1362 aaPredicted RBP8.56□□□□□ -1.04
HERC2-201ENST00000261609 CNTLNQ9NXG0 1405 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
HERC2-201ENST00000261609 MYO6Q9UM54 1294 aa8.56□□□□□ -1.04
HERC2-201ENST00000261609 GOLGA6L10A6NI86 522 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 KIF18AQ8NI77 898 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 INCENPQ9NQS7 918 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 FOSBP53539 338 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 FAM193AP78312 1265 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 GOLGA6L7A0A1B0GV03 622 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 ELL2O00472 640 aaPredicted RBP8.55□□□□□ -1.04
HERC2-201ENST00000261609 ERC2O15083 957 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 TICAM2Q86XR7 235 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 CCDC18Q5T9S5 1454 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 UACAQ9BZF9 1416 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 NEK4P51957 841 aa8.55□□□□□ -1.04
HERC2-201ENST00000261609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.042e-6■■■■□ 19.8
HERC2-201ENST00000261609 NINLQ9Y2I6 1382 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 LRRCC1Q9C099 1032 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 ERLIN1O75477 346 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 CLCN1P35523 988 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 SAFBQ15424 915 aaKnown RBP eCLIP8.54□□□□□ -1.04
HERC2-201ENST00000261609 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 AMPHP49418 695 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
HERC2-201ENST00000261609 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 PDCP20941 246 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
HERC2-201ENST00000261609 MNAT1P51948 309 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 GGT6Q6P531 493 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 KINO60870 393 aaKnown RBP8.53□□□□□ -1.04
HERC2-201ENST00000261609 TRDNQ13061 729 aa8.53□□□□□ -1.04
HERC2-201ENST00000261609 PSMA5P28066 241 aa8.52□□□□□ -1.04
HERC2-201ENST00000261609 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.04
HERC2-201ENST00000261609 C9orf78Q9NZ63 289 aaPredicted RBP8.52□□□□□ -1.04
HERC2-201ENST00000261609 RIPK4P57078 832 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 CCDC9Q9Y3X0 531 aaKnown RBP8.52□□□□□ -1.05
HERC2-201ENST00000261609 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
HERC2-201ENST00000261609 G3BP1Q13283 466 aaKnown RBP eCLIP8.52□□□□□ -1.05
HERC2-201ENST00000261609 PTPN14Q15678 1187 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 COG3Q96JB2 828 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 NFXL1Q6ZNB6 911 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 TNMDQ9H2S6 317 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 EVC2Q86UK5 1308 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 CARMIL2Q6F5E8 1435 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 SYCE3A1L190 88 aa8.52□□□□□ -1.05
HERC2-201ENST00000261609 TNNT1P13805 278 aa8.51□□□□□ -1.05
HERC2-201ENST00000261609 XRCC6P12956 609 aaKnown RBP eCLIP8.51□□□□□ -1.05
HERC2-201ENST00000261609 FAM177A1Q8N128 213 aaPredicted RBP8.51□□□□□ -1.05
HERC2-201ENST00000261609 SMARCE1Q969G3 411 aa8.51□□□□□ -1.05
HERC2-201ENST00000261609 FIBPO43427 364 aa8.51□□□□□ -1.05
HERC2-201ENST00000261609 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
HERC2-201ENST00000261609 KAT6BQ8WYB5 2073 aa8.51□□□□□ -1.05
HERC2-201ENST00000261609 NEFHP12036 1026 aa8.51□□□□□ -1.05
HERC2-201ENST00000261609 CCDC94Q9BW85 323 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms