RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 POLR3GLQ9BT43 218 aa25.76■■□□□ 1.71
COL4A3BP-201ENST00000261415 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
COL4A3BP-201ENST00000261415 TECPR2O15040 1411 aa25.75■■□□□ 1.71
COL4A3BP-201ENST00000261415 CHD2O14647 1828 aaKnown RBP25.75■■□□□ 1.71
COL4A3BP-201ENST00000261415 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
COL4A3BP-201ENST00000261415 NPHP4O75161 1426 aaPredicted RBP25.73■■□□□ 1.71
COL4A3BP-201ENST00000261415 SLC24A1O60721 1099 aa25.73■■□□□ 1.71
COL4A3BP-201ENST00000261415 MYOM1P52179 1685 aa25.72■■□□□ 1.71
COL4A3BP-201ENST00000261415 PTPRUQ92729 1446 aa25.72■■□□□ 1.71
COL4A3BP-201ENST00000261415 PRAM1Q96QH2 718 aa25.72■■□□□ 1.71
COL4A3BP-201ENST00000261415 TULP4Q9NRJ4 1543 aa25.7■■□□□ 1.7
COL4A3BP-201ENST00000261415 NCKAP5LQ9HCH0 1330 aa25.69■■□□□ 1.7
COL4A3BP-201ENST00000261415 POGKQ9P215 609 aa25.69■■□□□ 1.7
COL4A3BP-201ENST00000261415 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.74e-6■■■□□ 19
COL4A3BP-201ENST00000261415 FAM135BQ49AJ0 1406 aa25.68■■□□□ 1.7
COL4A3BP-201ENST00000261415 PIK3R4Q99570 1358 aa25.68■■□□□ 1.7
COL4A3BP-201ENST00000261415 CDCA8Q53HL2 280 aa25.67■■□□□ 1.7
COL4A3BP-201ENST00000261415 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
COL4A3BP-201ENST00000261415 PLEKHH1Q9ULM0 1364 aa25.67■■□□□ 1.7
COL4A3BP-201ENST00000261415 HSPA2P54652 639 aa25.66■■□□□ 1.7
COL4A3BP-201ENST00000261415 SIRT1Q96EB6 747 aa25.65■■□□□ 1.7
COL4A3BP-201ENST00000261415 ROBO2Q9HCK4 1378 aa25.65■■□□□ 1.7
COL4A3BP-201ENST00000261415 WAPLQ7Z5K2 1190 aa25.65■■□□□ 1.7
COL4A3BP-201ENST00000261415 UBE2Q2Q8WVN8 375 aa25.63■■□□□ 1.69
COL4A3BP-201ENST00000261415 PTCH1Q13635 1447 aa25.63■■□□□ 1.69
COL4A3BP-201ENST00000261415 AMOTL2Q9Y2J4 779 aa25.63■■□□□ 1.69
COL4A3BP-201ENST00000261415 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.62■■□□□ 1.69
COL4A3BP-201ENST00000261415 MINK1Q8N4C8 1332 aaPredicted RBP25.62■■□□□ 1.69
COL4A3BP-201ENST00000261415 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
COL4A3BP-201ENST00000261415 ADGRB2O60241 1585 aa25.59■■□□□ 1.69
COL4A3BP-201ENST00000261415 NWD1Q149M9 1564 aa25.58■■□□□ 1.69
COL4A3BP-201ENST00000261415 KCNA6P17658 529 aa25.54■■□□□ 1.68
COL4A3BP-201ENST00000261415 PUS7Q96PZ0 661 aaKnown RBP25.53■■□□□ 1.68
COL4A3BP-201ENST00000261415 STRCP1A6NGW2 1772 aa25.52■■□□□ 1.68
COL4A3BP-201ENST00000261415 CABP2Q9NPB3 220 aa25.52■■□□□ 1.68
COL4A3BP-201ENST00000261415 SALL2Q9Y467 1007 aaPredicted RBP25.52■■□□□ 1.68
COL4A3BP-201ENST00000261415 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.67
COL4A3BP-201ENST00000261415 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
COL4A3BP-201ENST00000261415 CDK19Q9BWU1 502 aa25.49■■□□□ 1.67
COL4A3BP-201ENST00000261415 PANK3Q9H999 370 aa25.49■■□□□ 1.67
COL4A3BP-201ENST00000261415 ANP32CO43423 234 aa25.48■■□□□ 1.67
COL4A3BP-201ENST00000261415 ATAD2Q6PL18 1390 aa25.47■■□□□ 1.67
COL4A3BP-201ENST00000261415 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
COL4A3BP-201ENST00000261415 RGPD8O14715 1765 aaPredicted RBP25.45■■□□□ 1.66
COL4A3BP-201ENST00000261415 NKTRP30414 1462 aaKnown RBP25.44■■□□□ 1.66
COL4A3BP-201ENST00000261415 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
COL4A3BP-201ENST00000261415 TOPAZ1Q8N9V7 1692 aa25.44■■□□□ 1.66
COL4A3BP-201ENST00000261415 TMC1Q8TDI8 760 aa25.44■■□□□ 1.66
COL4A3BP-201ENST00000261415 NINLQ9Y2I6 1382 aa25.43■■□□□ 1.66
COL4A3BP-201ENST00000261415 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
COL4A3BP-201ENST00000261415 FMN2Q9NZ56 1722 aa25.43■■□□□ 1.66
COL4A3BP-201ENST00000261415 ITSN1Q15811 1721 aa25.42■■□□□ 1.66
COL4A3BP-201ENST00000261415 USP32Q8NFA0 1604 aa25.42■■□□□ 1.66
COL4A3BP-201ENST00000261415 ATP7BP35670 1465 aa25.41■■□□□ 1.66
COL4A3BP-201ENST00000261415 CDC42BPGQ6DT37 1551 aa25.4■■□□□ 1.66
COL4A3BP-201ENST00000261415 PRKRIP1Q9H875 184 aaPredicted RBP25.38■■□□□ 1.65
COL4A3BP-201ENST00000261415 ANKRD36BQ8N2N9 1353 aa25.38■■□□□ 1.65
COL4A3BP-201ENST00000261415 AKAP12Q02952 1782 aa25.37■■□□□ 1.65
COL4A3BP-201ENST00000261415 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
COL4A3BP-201ENST00000261415 CD163L1Q9NR16 1453 aa25.36■■□□□ 1.65
COL4A3BP-201ENST00000261415 XIRP1Q702N8 1843 aaKnown RBP25.36■■□□□ 1.65
COL4A3BP-201ENST00000261415 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
COL4A3BP-201ENST00000261415 RBM33Q96EV2 1170 aaKnown RBP25.35■■□□□ 1.65
COL4A3BP-201ENST00000261415 PPIP5K1Q6PFW1 1433 aa25.35■■□□□ 1.65
COL4A3BP-201ENST00000261415 PRR36Q9H6K5 1346 aa25.35■■□□□ 1.65
COL4A3BP-201ENST00000261415 KNSTRNQ9Y448 316 aa25.34■■□□□ 1.65
COL4A3BP-201ENST00000261415 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
COL4A3BP-201ENST00000261415 CARD14Q9BXL6 1004 aa25.34■■□□□ 1.65
COL4A3BP-201ENST00000261415 MON2Q7Z3U7 1717 aa25.33■■□□□ 1.65
COL4A3BP-201ENST00000261415 A0A1W2PP64 1363 aa25.33■■□□□ 1.65
COL4A3BP-201ENST00000261415 CABP1Q9NZU7 370 aa25.33■■□□□ 1.64
COL4A3BP-201ENST00000261415 NSD3Q9BZ95 1437 aa25.32■■□□□ 1.64
COL4A3BP-201ENST00000261415 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
COL4A3BP-201ENST00000261415 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
COL4A3BP-201ENST00000261415 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
COL4A3BP-201ENST00000261415 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
COL4A3BP-201ENST00000261415 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
COL4A3BP-201ENST00000261415 AMER1Q5JTC6 1135 aaPredicted RBP25.29■■□□□ 1.64
COL4A3BP-201ENST00000261415 TERF2IPQ9NYB0 399 aa25.29■■□□□ 1.64
COL4A3BP-201ENST00000261415 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
COL4A3BP-201ENST00000261415 DMRT2Q9Y5R5 561 aa25.28■■□□□ 1.64
COL4A3BP-201ENST00000261415 PARD3Q8TEW0 1356 aa25.28■■□□□ 1.64
COL4A3BP-201ENST00000261415 NPC1L1Q9UHC9 1359 aa25.28■■□□□ 1.64
COL4A3BP-201ENST00000261415 CCER2I3L3R5 266 aa25.28■■□□□ 1.64
COL4A3BP-201ENST00000261415 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
COL4A3BP-201ENST00000261415 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
COL4A3BP-201ENST00000261415 C14orf37Q86TY3 774 aa25.27■■□□□ 1.64
COL4A3BP-201ENST00000261415 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
COL4A3BP-201ENST00000261415 CPSF1Q10570 1443 aaKnown RBP25.26■■□□□ 1.63
COL4A3BP-201ENST00000261415 TMEM94Q12767 1356 aa25.26■■□□□ 1.63
COL4A3BP-201ENST00000261415 ZNF335Q9H4Z2 1342 aaPredicted RBP25.26■■□□□ 1.63
COL4A3BP-201ENST00000261415 NOP58Q9Y2X3 529 aaKnown RBP25.25■■□□□ 1.63
COL4A3BP-201ENST00000261415 RALBP1Q15311 655 aa25.25■■□□□ 1.63
COL4A3BP-201ENST00000261415 NCOA3Q9Y6Q9 1424 aa25.25■■□□□ 1.63
COL4A3BP-201ENST00000261415 CCDC136Q96JN2 1154 aa25.24■■□□□ 1.63
COL4A3BP-201ENST00000261415 NRKQ7Z2Y5 1582 aa25.23■■□□□ 1.63
COL4A3BP-201ENST00000261415 LRRC7Q96NW7 1537 aa25.22■■□□□ 1.63
COL4A3BP-201ENST00000261415 CGNL1Q0VF96 1302 aa25.21■■□□□ 1.63
COL4A3BP-201ENST00000261415 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.63
COL4A3BP-201ENST00000261415 C19orf44Q9H6X5 657 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms