RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DLC1Q96QB1 1528 aa37.49■■■■□ 3.59
CCM2-201ENST00000258781 PNISRQ8TF01 805 aaKnown RBP37.49■■■■□ 3.59
CCM2-201ENST00000258781 KNSTRNQ9Y448 316 aa37.49■■■■□ 3.59
CCM2-201ENST00000258781 DIP2AQ14689 1571 aa37.48■■■■□ 3.59
CCM2-201ENST00000258781 ABCC11Q96J66 1382 aa37.47■■■■□ 3.59
CCM2-201ENST00000258781 NPC1L1Q9UHC9 1359 aa37.47■■■■□ 3.59
CCM2-201ENST00000258781 ZBED9Q6R2W3 1325 aa37.45■■■■□ 3.59
CCM2-201ENST00000258781 CC2D1BQ5T0F9 858 aaKnown RBP37.45■■■■□ 3.59
CCM2-201ENST00000258781 PRAM1Q96QH2 718 aa37.45■■■■□ 3.59
CCM2-201ENST00000258781 SAFB2Q14151 953 aaKnown RBP eCLIP37.44■■■■□ 3.585e-8■■■□□ 18
CCM2-201ENST00000258781 TECPR2O15040 1411 aa37.43■■■■□ 3.58
CCM2-201ENST00000258781 PUS7Q96PZ0 661 aaKnown RBP37.42■■■■□ 3.58
CCM2-201ENST00000258781 TBX22Q9Y458 520 aa37.42■■■■□ 3.58
CCM2-201ENST00000258781 CPS1P31327 1500 aa37.42■■■■□ 3.58
CCM2-201ENST00000258781 PTPRUQ92729 1446 aa37.42■■■■□ 3.58
CCM2-201ENST00000258781 AMER1Q5JTC6 1135 aaPredicted RBP37.41■■■■□ 3.58
CCM2-201ENST00000258781 TULP4Q9NRJ4 1543 aa37.4■■■■□ 3.58
CCM2-201ENST00000258781 PLEKHH1Q9ULM0 1364 aa37.39■■■■□ 3.58
CCM2-201ENST00000258781 POGKQ9P215 609 aa37.37■■■■□ 3.57
CCM2-201ENST00000258781 WAPLQ7Z5K2 1190 aa37.37■■■■□ 3.57
CCM2-201ENST00000258781 EVC2Q86UK5 1308 aa37.35■■■■□ 3.57
CCM2-201ENST00000258781 LMTK3Q96Q04 1460 aa37.35■■■■□ 3.57
CCM2-201ENST00000258781 NPHP4O75161 1426 aaPredicted RBP37.34■■■■□ 3.57
CCM2-201ENST00000258781 NCKAP5LQ9HCH0 1330 aa37.34■■■■□ 3.57
CCM2-201ENST00000258781 ROBO2Q9HCK4 1378 aa37.33■■■■□ 3.57
CCM2-201ENST00000258781 XRN1Q8IZH2 1706 aaKnown RBP37.32■■■■□ 3.56
CCM2-201ENST00000258781 FAM135BQ49AJ0 1406 aa37.31■■■■□ 3.56
CCM2-201ENST00000258781 MINK1Q8N4C8 1332 aaPredicted RBP37.3■■■■□ 3.56
CCM2-201ENST00000258781 HSPA2P54652 639 aa37.29■■■■□ 3.56
CCM2-201ENST00000258781 INSRP06213 1382 aa37.27■■■■□ 3.56
CCM2-201ENST00000258781 AMOTL2Q9Y2J4 779 aa37.27■■■■□ 3.56
CCM2-201ENST00000258781 CHD2O14647 1828 aaKnown RBP37.27■■■■□ 3.56
CCM2-201ENST00000258781 SIRT1Q96EB6 747 aa37.26■■■■□ 3.56
CCM2-201ENST00000258781 USP32Q8NFA0 1604 aa37.26■■■■□ 3.56
CCM2-201ENST00000258781 PIK3R4Q99570 1358 aa37.25■■■■□ 3.55
CCM2-201ENST00000258781 CARD14Q9BXL6 1004 aa37.24■■■■□ 3.55
CCM2-201ENST00000258781 PTCH1Q13635 1447 aa37.22■■■■□ 3.55
CCM2-201ENST00000258781 PPP2R1AP30153 589 aa37.22■■■■□ 3.55
CCM2-201ENST00000258781 SUPT16HQ9Y5B9 1047 aaKnown RBP37.22■■■■□ 3.55
CCM2-201ENST00000258781 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.21■■■■□ 3.55
CCM2-201ENST00000258781 NINLQ9Y2I6 1382 aa37.2■■■■□ 3.54
CCM2-201ENST00000258781 CABP2Q9NPB3 220 aa37.19■■■■□ 3.54
CCM2-201ENST00000258781 SLC12A5Q9H2X9 1139 aa37.17■■■■□ 3.54
CCM2-201ENST00000258781 NSD3Q9BZ95 1437 aa37.16■■■■□ 3.54
CCM2-201ENST00000258781 KCNA6P17658 529 aa37.16■■■■□ 3.54
CCM2-201ENST00000258781 STRCQ7RTU9 1775 aa37.15■■■■□ 3.54
CCM2-201ENST00000258781 ANKRD36BQ8N2N9 1353 aa37.14■■■■□ 3.54
CCM2-201ENST00000258781 SRPK2P78362 688 aaKnown RBP37.13■■■■□ 3.53
CCM2-201ENST00000258781 ATAD2Q6PL18 1390 aa37.13■■■■□ 3.53
CCM2-201ENST00000258781 ADGRB2O60241 1585 aa37.12■■■■□ 3.53
CCM2-201ENST00000258781 NEFLP07196 543 aa37.12■■■■□ 3.53
CCM2-201ENST00000258781 CDK19Q9BWU1 502 aa37.12■■■■□ 3.53
CCM2-201ENST00000258781 BLMP54132 1417 aaPredicted RBP37.11■■■■□ 3.53
CCM2-201ENST00000258781 SMG6Q86US8 1419 aaKnown RBP37.08■■■■□ 3.53
CCM2-201ENST00000258781 NWD1Q149M9 1564 aa37.07■■■■□ 3.53
CCM2-201ENST00000258781 WASLO00401 505 aaPredicted RBP37.06■■■■□ 3.52
CCM2-201ENST00000258781 FKBP8Q14318 412 aa37.03■■■■□ 3.52
CCM2-201ENST00000258781 NSD2O96028 1365 aa37.02■■■■□ 3.52
CCM2-201ENST00000258781 CGNL1Q0VF96 1302 aa37.02■■■■□ 3.52
CCM2-201ENST00000258781 NALCNQ8IZF0 1738 aa36.99■■■■□ 3.51
CCM2-201ENST00000258781 STRCP1A6NGW2 1772 aa36.98■■■■□ 3.51
CCM2-201ENST00000258781 NUDCQ9Y266 331 aa36.96■■■■□ 3.51
CCM2-201ENST00000258781 A0A1W2PP64 1363 aa36.96■■■■□ 3.51
CCM2-201ENST00000258781 ATP7BP35670 1465 aa36.95■■■■□ 3.51
CCM2-201ENST00000258781 WDR43Q15061 677 aaKnown RBP eCLIP36.94■■■■□ 3.5
CCM2-201ENST00000258781 MORC1Q86VD1 984 aa36.94■■■■□ 3.5
CCM2-201ENST00000258781 RBM33Q96EV2 1170 aaKnown RBP36.94■■■■□ 3.5
CCM2-201ENST00000258781 CD163L1Q9NR16 1453 aa36.94■■■■□ 3.5
CCM2-201ENST00000258781 TERF2IPQ9NYB0 399 aa36.92■■■■□ 3.5
CCM2-201ENST00000258781 PRR36Q9H6K5 1346 aa36.92■■■■□ 3.5
CCM2-201ENST00000258781 ANKRD26Q9UPS8 1709 aa36.91■■■■□ 3.5
CCM2-201ENST00000258781 POLR3AO14802 1390 aaPredicted RBP36.91■■■■□ 3.5
CCM2-201ENST00000258781 ADAMTS8Q9UP79 889 aa36.9■■■■□ 3.5
CCM2-201ENST00000258781 CABP1Q9NZU7 370 aa36.9■■■■□ 3.5
CCM2-201ENST00000258781 TOPAZ1Q8N9V7 1692 aa36.9■■■■□ 3.5
CCM2-201ENST00000258781 NUDT16Q96DE0 195 aaKnown RBP36.89■■■■□ 3.5
CCM2-201ENST00000258781 NKTRP30414 1462 aaKnown RBP36.88■■■■□ 3.5
CCM2-201ENST00000258781 PDE3BQ13370 1112 aa36.88■■■■□ 3.49
CCM2-201ENST00000258781 PPIP5K1Q6PFW1 1433 aa36.88■■■■□ 3.49
CCM2-201ENST00000258781 RGPD8O14715 1765 aaPredicted RBP36.86■■■■□ 3.49
CCM2-201ENST00000258781 FMN2Q9NZ56 1722 aa36.85■■■■□ 3.49
CCM2-201ENST00000258781 NUTM2FA1L443 756 aa36.85■■■■□ 3.49
CCM2-201ENST00000258781 CDC42BPGQ6DT37 1551 aa36.84■■■■□ 3.49
CCM2-201ENST00000258781 ADGRL3Q9HAR2 1447 aa36.83■■■■□ 3.49
CCM2-201ENST00000258781 HDGFL2Q7Z4V5 671 aaPredicted RBP36.83■■■■□ 3.49
CCM2-201ENST00000258781 CCDC61Q9Y6R9 512 aa36.82■■■■□ 3.49
CCM2-201ENST00000258781 KIF20BQ96Q89 1820 aa36.82■■■■□ 3.48
CCM2-201ENST00000258781 SENP3-EIF4A1A0A087X0R7 540 aa36.81■■■■□ 3.48
CCM2-201ENST00000258781 SHPRHQ149N8 1683 aa36.8■■■■□ 3.48
CCM2-201ENST00000258781 ITSN1Q15811 1721 aa36.78■■■■□ 3.48
CCM2-201ENST00000258781 PROSER2Q86WR7 435 aaPredicted RBP36.77■■■■□ 3.48
CCM2-201ENST00000258781 AKAP12Q02952 1782 aa36.77■■■■□ 3.48
CCM2-201ENST00000258781 ERICH6BQ5W0A0 696 aa36.77■■■■□ 3.48
CCM2-201ENST00000258781 CPSF1Q10570 1443 aaKnown RBP36.75■■■■□ 3.47
CCM2-201ENST00000258781 MON2Q7Z3U7 1717 aa36.74■■■■□ 3.47
CCM2-201ENST00000258781 ANKARQ7Z5J8 1434 aa36.71■■■■□ 3.47
CCM2-201ENST00000258781 TNNT2P45379 298 aaPredicted RBP36.71■■■■□ 3.47
CCM2-201ENST00000258781 C14orf37Q86TY3 774 aa36.71■■■■□ 3.47
CCM2-201ENST00000258781 SALL2Q9Y467 1007 aaPredicted RBP36.71■■■■□ 3.47
CCM2-201ENST00000258781 TMEM94Q12767 1356 aa36.7■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms