RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
NIP7-202ENST00000254941 POGKQ9P215 609 aa13.02□□□□□ -0.33
NIP7-202ENST00000254941 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
NIP7-202ENST00000254941 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
NIP7-202ENST00000254941 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
NIP7-202ENST00000254941 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
NIP7-202ENST00000254941 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
NIP7-202ENST00000254941 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
NIP7-202ENST00000254941 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
NIP7-202ENST00000254941 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
NIP7-202ENST00000254941 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
NIP7-202ENST00000254941 PANK3Q9H999 370 aa12.99□□□□□ -0.33
NIP7-202ENST00000254941 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
NIP7-202ENST00000254941 CHD2O14647 1828 aaKnown RBP12.98□□□□□ -0.33
NIP7-202ENST00000254941 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
NIP7-202ENST00000254941 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
NIP7-202ENST00000254941 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
NIP7-202ENST00000254941 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
NIP7-202ENST00000254941 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
NIP7-202ENST00000254941 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
NIP7-202ENST00000254941 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.34
NIP7-202ENST00000254941 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
NIP7-202ENST00000254941 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
NIP7-202ENST00000254941 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
NIP7-202ENST00000254941 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
NIP7-202ENST00000254941 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
NIP7-202ENST00000254941 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
NIP7-202ENST00000254941 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
NIP7-202ENST00000254941 RALBP1Q15311 655 aa12.92□□□□□ -0.34
NIP7-202ENST00000254941 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
NIP7-202ENST00000254941 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
NIP7-202ENST00000254941 TMC1Q8TDI8 760 aa12.91□□□□□ -0.34
NIP7-202ENST00000254941 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
NIP7-202ENST00000254941 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
NIP7-202ENST00000254941 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
NIP7-202ENST00000254941 ANKRD36BQ8N2N9 1353 aa12.9□□□□□ -0.34
NIP7-202ENST00000254941 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
NIP7-202ENST00000254941 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
NIP7-202ENST00000254941 USP32Q8NFA0 1604 aa12.9□□□□□ -0.35
NIP7-202ENST00000254941 KCNA6P17658 529 aa12.89□□□□□ -0.35
NIP7-202ENST00000254941 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
NIP7-202ENST00000254941 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
NIP7-202ENST00000254941 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
NIP7-202ENST00000254941 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
NIP7-202ENST00000254941 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
NIP7-202ENST00000254941 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
NIP7-202ENST00000254941 STRCQ7RTU9 1775 aa12.87□□□□□ -0.35
NIP7-202ENST00000254941 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
NIP7-202ENST00000254941 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
NIP7-202ENST00000254941 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
NIP7-202ENST00000254941 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
NIP7-202ENST00000254941 ATP7BP35670 1465 aa12.86□□□□□ -0.35
NIP7-202ENST00000254941 TOPAZ1Q8N9V7 1692 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 HSPA2P54652 639 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
NIP7-202ENST00000254941 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
NIP7-202ENST00000254941 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
NIP7-202ENST00000254941 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
NIP7-202ENST00000254941 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
NIP7-202ENST00000254941 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
NIP7-202ENST00000254941 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
NIP7-202ENST00000254941 CGNL1Q0VF96 1302 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
NIP7-202ENST00000254941 ANKRD26Q9UPS8 1709 aa12.82□□□□□ -0.36
NIP7-202ENST00000254941 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
NIP7-202ENST00000254941 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
NIP7-202ENST00000254941 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
NIP7-202ENST00000254941 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
NIP7-202ENST00000254941 NKTRP30414 1462 aaKnown RBP12.81□□□□□ -0.36
NIP7-202ENST00000254941 NSD2O96028 1365 aa12.81□□□□□ -0.36
NIP7-202ENST00000254941 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
NIP7-202ENST00000254941 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
NIP7-202ENST00000254941 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
NIP7-202ENST00000254941 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
NIP7-202ENST00000254941 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
NIP7-202ENST00000254941 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
NIP7-202ENST00000254941 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
NIP7-202ENST00000254941 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
NIP7-202ENST00000254941 EDC4Q6P2E9 1401 aaKnown RBP12.78□□□□□ -0.36
NIP7-202ENST00000254941 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
NIP7-202ENST00000254941 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
NIP7-202ENST00000254941 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
NIP7-202ENST00000254941 FYB1O15117 783 aa12.76□□□□□ -0.37
NIP7-202ENST00000254941 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
NIP7-202ENST00000254941 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
NIP7-202ENST00000254941 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
NIP7-202ENST00000254941 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
NIP7-202ENST00000254941 ACEP12821 1306 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms