RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
SUGP1-201ENST00000247001 CDCA8Q53HL2 280 aa16.65■□□□□ 0.26
SUGP1-201ENST00000247001 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
SUGP1-201ENST00000247001 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
SUGP1-201ENST00000247001 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
SUGP1-201ENST00000247001 STRCP1A6NGW2 1772 aa16.62■□□□□ 0.25
SUGP1-201ENST00000247001 YTHDC2Q9H6S0 1430 aaKnown RBP16.62■□□□□ 0.25
SUGP1-201ENST00000247001 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
SUGP1-201ENST00000247001 POGKQ9P215 609 aa16.61■□□□□ 0.25
SUGP1-201ENST00000247001 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
SUGP1-201ENST00000247001 NRXN3Q9Y4C0 1643 aa16.61■□□□□ 0.25
SUGP1-201ENST00000247001 MYOM1P52179 1685 aa16.6■□□□□ 0.25
SUGP1-201ENST00000247001 KCNA6P17658 529 aa16.6■□□□□ 0.25
SUGP1-201ENST00000247001 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
SUGP1-201ENST00000247001 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
SUGP1-201ENST00000247001 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
SUGP1-201ENST00000247001 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
SUGP1-201ENST00000247001 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
SUGP1-201ENST00000247001 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
SUGP1-201ENST00000247001 METP08581 1390 aa16.59■□□□□ 0.25
SUGP1-201ENST00000247001 TMC1Q8TDI8 760 aa16.58■□□□□ 0.25
SUGP1-201ENST00000247001 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
SUGP1-201ENST00000247001 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
SUGP1-201ENST00000247001 NEFLP07196 543 aa16.57■□□□□ 0.24
SUGP1-201ENST00000247001 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
SUGP1-201ENST00000247001 AMOTL2Q9Y2J4 779 aa16.56■□□□□ 0.24
SUGP1-201ENST00000247001 PIP4K2BP78356 416 aa16.56■□□□□ 0.24
SUGP1-201ENST00000247001 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
SUGP1-201ENST00000247001 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
SUGP1-201ENST00000247001 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
SUGP1-201ENST00000247001 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
SUGP1-201ENST00000247001 EVC2Q86UK5 1308 aa16.55■□□□□ 0.24
SUGP1-201ENST00000247001 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
SUGP1-201ENST00000247001 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
SUGP1-201ENST00000247001 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
SUGP1-201ENST00000247001 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
SUGP1-201ENST00000247001 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
SUGP1-201ENST00000247001 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
SUGP1-201ENST00000247001 FKBP8Q14318 412 aa16.54■□□□□ 0.24
SUGP1-201ENST00000247001 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
SUGP1-201ENST00000247001 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
SUGP1-201ENST00000247001 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
SUGP1-201ENST00000247001 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
SUGP1-201ENST00000247001 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.24
SUGP1-201ENST00000247001 TMEM94Q12767 1356 aa16.52■□□□□ 0.24
SUGP1-201ENST00000247001 RALBP1Q15311 655 aa16.5■□□□□ 0.23
SUGP1-201ENST00000247001 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
SUGP1-201ENST00000247001 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
SUGP1-201ENST00000247001 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
SUGP1-201ENST00000247001 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
SUGP1-201ENST00000247001 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
SUGP1-201ENST00000247001 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
SUGP1-201ENST00000247001 MSH5O43196 834 aa16.47■□□□□ 0.23
SUGP1-201ENST00000247001 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
SUGP1-201ENST00000247001 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
SUGP1-201ENST00000247001 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
SUGP1-201ENST00000247001 AMER1Q5JTC6 1135 aaPredicted RBP16.46■□□□□ 0.23
SUGP1-201ENST00000247001 CHD2O14647 1828 aaKnown RBP16.45■□□□□ 0.22
SUGP1-201ENST00000247001 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
SUGP1-201ENST00000247001 CPS1P31327 1500 aa16.44■□□□□ 0.22
SUGP1-201ENST00000247001 KNDC1Q76NI1 1749 aa16.44■□□□□ 0.22
SUGP1-201ENST00000247001 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
SUGP1-201ENST00000247001 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
SUGP1-201ENST00000247001 ROBO2Q9HCK4 1378 aa16.44■□□□□ 0.22
SUGP1-201ENST00000247001 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
SUGP1-201ENST00000247001 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
SUGP1-201ENST00000247001 TOM1O60784 492 aa16.42■□□□□ 0.22
SUGP1-201ENST00000247001 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
SUGP1-201ENST00000247001 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
SUGP1-201ENST00000247001 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
SUGP1-201ENST00000247001 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
SUGP1-201ENST00000247001 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
SUGP1-201ENST00000247001 TECPR2O15040 1411 aa16.4■□□□□ 0.22
SUGP1-201ENST00000247001 CABP1Q9NZU7 370 aa16.4■□□□□ 0.22
SUGP1-201ENST00000247001 FAM135BQ49AJ0 1406 aa16.39■□□□□ 0.21
SUGP1-201ENST00000247001 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
SUGP1-201ENST00000247001 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
SUGP1-201ENST00000247001 A0A1W2PP64 1363 aa16.39■□□□□ 0.21
SUGP1-201ENST00000247001 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
SUGP1-201ENST00000247001 HSPA1LP34931 641 aa16.38■□□□□ 0.21
SUGP1-201ENST00000247001 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
SUGP1-201ENST00000247001 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
SUGP1-201ENST00000247001 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
SUGP1-201ENST00000247001 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
SUGP1-201ENST00000247001 NWD1Q149M9 1564 aa16.37■□□□□ 0.21
SUGP1-201ENST00000247001 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
SUGP1-201ENST00000247001 DIP2AQ14689 1571 aa16.37■□□□□ 0.21
SUGP1-201ENST00000247001 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
SUGP1-201ENST00000247001 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
SUGP1-201ENST00000247001 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
SUGP1-201ENST00000247001 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
SUGP1-201ENST00000247001 MSH6P52701 1360 aa16.35■□□□□ 0.21
SUGP1-201ENST00000247001 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
SUGP1-201ENST00000247001 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
SUGP1-201ENST00000247001 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
SUGP1-201ENST00000247001 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
SUGP1-201ENST00000247001 NPC1L1Q9UHC9 1359 aa16.34■□□□□ 0.21
SUGP1-201ENST00000247001 NINLQ9Y2I6 1382 aa16.34■□□□□ 0.21
SUGP1-201ENST00000247001 HDGFL2Q7Z4V5 671 aaPredicted RBP16.34■□□□□ 0.21
SUGP1-201ENST00000247001 ATF3P18847 181 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms