RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TESK2Q96S53 571 aa26.03■■□□□ 1.76
HOXC13-201ENST00000243056 STK26Q9P289 416 aa26.03■■□□□ 1.76
HOXC13-201ENST00000243056 NRXN1Q9ULB1 1477 aa26.03■■□□□ 1.76
HOXC13-201ENST00000243056 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
HOXC13-201ENST00000243056 SAFB2Q14151 953 aaKnown RBP eCLIP25.99■■□□□ 1.75
HOXC13-201ENST00000243056 RIMS2Q9UQ26 1411 aa25.99■■□□□ 1.75
HOXC13-201ENST00000243056 DISP3Q9P2K9 1392 aa25.98■■□□□ 1.75
HOXC13-201ENST00000243056 MS4A1P11836 297 aa25.98■■□□□ 1.75
HOXC13-201ENST00000243056 FRAT2O75474 233 aaPredicted RBP25.97■■□□□ 1.75
HOXC13-201ENST00000243056 NAP1L5Q96NT1 182 aaPredicted RBP25.97■■□□□ 1.75
HOXC13-201ENST00000243056 LTKP29376 864 aa25.96■■□□□ 1.75
HOXC13-201ENST00000243056 SCAF11Q99590 1463 aaKnown RBP25.95■■□□□ 1.74
HOXC13-201ENST00000243056 HSP90AA1P07900 732 aaKnown RBP25.94■■□□□ 1.74
HOXC13-201ENST00000243056 A0A0U1RQG5 324 aaPredicted RBP25.92■■□□□ 1.74
HOXC13-201ENST00000243056 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
HOXC13-201ENST00000243056 ADGRB1O14514 1584 aa25.9■■□□□ 1.74
HOXC13-201ENST00000243056 EXOC6Q8TAG9 804 aa25.89■■□□□ 1.74
HOXC13-201ENST00000243056 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
HOXC13-201ENST00000243056 TXNDC2Q86VQ3 553 aa25.89■■□□□ 1.73
HOXC13-201ENST00000243056 IQGAP1P46940 1657 aa25.89■■□□□ 1.73
HOXC13-201ENST00000243056 RBM10P98175 930 aaKnown RBP25.88■■□□□ 1.73
HOXC13-201ENST00000243056 ADAMTSL3P82987 1691 aa25.88■■□□□ 1.73
HOXC13-201ENST00000243056 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
HOXC13-201ENST00000243056 LAMC1P11047 1609 aa25.87■■□□□ 1.73
HOXC13-201ENST00000243056 SLC26A8Q96RN1 970 aa25.87■■□□□ 1.73
HOXC13-201ENST00000243056 KIAA1210Q9ULL0 1709 aa25.86■■□□□ 1.73
HOXC13-201ENST00000243056 ASXL1Q8IXJ9 1541 aa25.86■■□□□ 1.73
HOXC13-201ENST00000243056 TMF1P82094 1093 aa25.85■■□□□ 1.73
HOXC13-201ENST00000243056 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
HOXC13-201ENST00000243056 PTPRMP28827 1452 aa25.83■■□□□ 1.73
HOXC13-201ENST00000243056 NLRP1Q9C000 1473 aa25.83■■□□□ 1.73
HOXC13-201ENST00000243056 SKAP1Q86WV1 359 aa25.83■■□□□ 1.72
HOXC13-201ENST00000243056 ALKQ9UM73 1620 aa25.82■■□□□ 1.72
HOXC13-201ENST00000243056 CENPJQ9HC77 1338 aaPredicted RBP25.82■■□□□ 1.72
HOXC13-201ENST00000243056 PNNQ9H307 717 aaKnown RBP25.82■■□□□ 1.72
HOXC13-201ENST00000243056 METP08581 1390 aa25.82■■□□□ 1.72
HOXC13-201ENST00000243056 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.81■■□□□ 1.72
HOXC13-201ENST00000243056 AAMPQ13685 434 aa25.8■■□□□ 1.72
HOXC13-201ENST00000243056 WAPLQ7Z5K2 1190 aa25.8■■□□□ 1.72
HOXC13-201ENST00000243056 EIF3AQ14152 1382 aaKnown RBP25.8■■□□□ 1.72
HOXC13-201ENST00000243056 PRAM1Q96QH2 718 aa25.79■■□□□ 1.72
HOXC13-201ENST00000243056 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
HOXC13-201ENST00000243056 POGKQ9P215 609 aa25.78■■□□□ 1.72
HOXC13-201ENST00000243056 SETBP1Q9Y6X0 1596 aa25.78■■□□□ 1.72
HOXC13-201ENST00000243056 RRP1P56182 461 aaKnown RBP25.78■■□□□ 1.72
HOXC13-201ENST00000243056 MYO3AQ8NEV4 1616 aa25.77■■□□□ 1.72
HOXC13-201ENST00000243056 YTHDC2Q9H6S0 1430 aaKnown RBP25.77■■□□□ 1.72
HOXC13-201ENST00000243056 POLR1AO95602 1720 aaPredicted RBP25.77■■□□□ 1.72
HOXC13-201ENST00000243056 EID1Q9Y6B2 187 aa25.76■■□□□ 1.71
HOXC13-201ENST00000243056 MINK1Q8N4C8 1332 aaPredicted RBP25.76■■□□□ 1.71
HOXC13-201ENST00000243056 HDGFP51858 240 aaKnown RBP25.75■■□□□ 1.71
HOXC13-201ENST00000243056 CLCN1P35523 988 aa25.75■■□□□ 1.71
HOXC13-201ENST00000243056 PANK3Q9H999 370 aa25.74■■□□□ 1.71
HOXC13-201ENST00000243056 NRXN3Q9Y4C0 1643 aa25.74■■□□□ 1.71
HOXC13-201ENST00000243056 KDM4FA0A1W2PPD8 638 aa25.74■■□□□ 1.71
HOXC13-201ENST00000243056 PLEKHH1Q9ULM0 1364 aa25.73■■□□□ 1.71
HOXC13-201ENST00000243056 CEP170BQ9Y4F5 1589 aaPredicted RBP25.71■■□□□ 1.71
HOXC13-201ENST00000243056 FGD1P98174 961 aa25.71■■□□□ 1.71
HOXC13-201ENST00000243056 CABP2Q9NPB3 220 aa25.71■■□□□ 1.71
HOXC13-201ENST00000243056 ADAMTS13Q76LX8 1427 aa25.69■■□□□ 1.7
HOXC13-201ENST00000243056 PRDM4Q9UKN5 801 aa25.68■■□□□ 1.7
HOXC13-201ENST00000243056 ARHGEF28Q8N1W1 1705 aaKnown RBP25.67■■□□□ 1.7
HOXC13-201ENST00000243056 L1TD1Q5T7N2 865 aaKnown RBP25.67■■□□□ 1.7
HOXC13-201ENST00000243056 TMC1Q8TDI8 760 aa25.67■■□□□ 1.7
HOXC13-201ENST00000243056 ARHGAP23Q9P227 1491 aa25.66■■□□□ 1.7
HOXC13-201ENST00000243056 PLEKHG1Q9ULL1 1385 aa25.65■■□□□ 1.7
HOXC13-201ENST00000243056 QRICH2Q9H0J4 1663 aa25.65■■□□□ 1.7
HOXC13-201ENST00000243056 SETD1AO15047 1707 aaKnown RBP25.65■■□□□ 1.7
HOXC13-201ENST00000243056 SLC12A5Q9H2X9 1139 aa25.65■■□□□ 1.7
HOXC13-201ENST00000243056 PER1O15534 1290 aaPredicted RBP25.64■■□□□ 1.7
HOXC13-201ENST00000243056 HSPA2P54652 639 aa25.64■■□□□ 1.7
HOXC13-201ENST00000243056 CC2D1BQ5T0F9 858 aaKnown RBP25.64■■□□□ 1.7
HOXC13-201ENST00000243056 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.7
HOXC13-201ENST00000243056 SLIT1O75093 1534 aa25.64■■□□□ 1.7
HOXC13-201ENST00000243056 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
HOXC13-201ENST00000243056 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
HOXC13-201ENST00000243056 NCKAP5LQ9HCH0 1330 aa25.62■■□□□ 1.69
HOXC13-201ENST00000243056 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
HOXC13-201ENST00000243056 SRPK2P78362 688 aaKnown RBP25.62■■□□□ 1.69
HOXC13-201ENST00000243056 ANKLE2Q86XL3 938 aa25.62■■□□□ 1.69
HOXC13-201ENST00000243056 PTPRUQ92729 1446 aa25.61■■□□□ 1.69
HOXC13-201ENST00000243056 CALD1Q05682 793 aaKnown RBP25.6■■□□□ 1.69
HOXC13-201ENST00000243056 CDCA8Q53HL2 280 aa25.59■■□□□ 1.69
HOXC13-201ENST00000243056 ROBO2Q9HCK4 1378 aa25.59■■□□□ 1.69
HOXC13-201ENST00000243056 AMOTL2Q9Y2J4 779 aa25.59■■□□□ 1.69
HOXC13-201ENST00000243056 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
HOXC13-201ENST00000243056 ABCC11Q96J66 1382 aa25.58■■□□□ 1.69
HOXC13-201ENST00000243056 SBNO2Q9Y2G9 1366 aa25.58■■□□□ 1.69
HOXC13-201ENST00000243056 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
HOXC13-201ENST00000243056 EVC2Q86UK5 1308 aa25.57■■□□□ 1.68
HOXC13-201ENST00000243056 XRCC6P12956 609 aaKnown RBP eCLIP25.57■■□□□ 1.68
HOXC13-201ENST00000243056 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
HOXC13-201ENST00000243056 ARXQ96QS3 562 aa25.56■■□□□ 1.68
HOXC13-201ENST00000243056 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
HOXC13-201ENST00000243056 RCAN3Q9UKA8 241 aa25.56■■□□□ 1.68
HOXC13-201ENST00000243056 RGS3P49796 1198 aa25.55■■□□□ 1.68
HOXC13-201ENST00000243056 MED14O60244 1454 aa25.54■■□□□ 1.68
HOXC13-201ENST00000243056 PANK2Q9BZ23 570 aa25.54■■□□□ 1.68
HOXC13-201ENST00000243056 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
HOXC13-201ENST00000243056 KCNA6P17658 529 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms