RNA–Protein interactions for RNA: ENST00000239944.6

SERP1-201, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERP1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-201ENST00000239944 MYOM1P52179 1685 aa19■□□□□ 0.63
SERP1-201ENST00000239944 MTHFSP49914 203 aa18.98■□□□□ 0.63
SERP1-201ENST00000239944 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
SERP1-201ENST00000239944 SYNMO15061 1565 aa18.98■□□□□ 0.63
SERP1-201ENST00000239944 ATP10AO60312 1499 aa18.98■□□□□ 0.63
SERP1-201ENST00000239944 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
SERP1-201ENST00000239944 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
SERP1-201ENST00000239944 UPF2Q9HAU5 1272 aaKnown RBP18.97■□□□□ 0.63
SERP1-201ENST00000239944 ERVK-7P63135 1459 aa18.96■□□□□ 0.63
SERP1-201ENST00000239944 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
SERP1-201ENST00000239944 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
SERP1-201ENST00000239944 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
SERP1-201ENST00000239944 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
SERP1-201ENST00000239944 U2AF1L5P0DN76 240 aaPredicted RBP18.93■□□□□ 0.62
SERP1-201ENST00000239944 U2AF1Q01081 240 aaKnown RBP eCLIP18.93■□□□□ 0.62
SERP1-201ENST00000239944 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
SERP1-201ENST00000239944 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
SERP1-201ENST00000239944 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
SERP1-201ENST00000239944 CLTCL1P53675 1640 aa18.93■□□□□ 0.62
SERP1-201ENST00000239944 MCM4P33991 863 aa18.92■□□□□ 0.62
SERP1-201ENST00000239944 FTSJ3Q8IY81 847 aaKnown RBP18.92■□□□□ 0.62
SERP1-201ENST00000239944 C22orf23Q9BZE7 217 aa18.91■□□□□ 0.62
SERP1-201ENST00000239944 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
SERP1-201ENST00000239944 INO80Q9ULG1 1556 aaPredicted RBP18.91■□□□□ 0.62
SERP1-201ENST00000239944 GOLGA6L3A6NEY3 463 aa18.9■□□□□ 0.62
SERP1-201ENST00000239944 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.62
SERP1-201ENST00000239944 RWDD1Q9H446 243 aaPredicted RBP18.89■□□□□ 0.62
SERP1-201ENST00000239944 VIRMAQ69YN4 1812 aaKnown RBP18.89■□□□□ 0.61
SERP1-201ENST00000239944 ZNF518AQ6AHZ1 1483 aa18.89■□□□□ 0.61
SERP1-201ENST00000239944 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
SERP1-201ENST00000239944 GGT6Q6P531 493 aa18.89■□□□□ 0.61
SERP1-201ENST00000239944 KANK1Q14678 1352 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 TRAK2O60296 914 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
SERP1-201ENST00000239944 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
SERP1-201ENST00000239944 NAP1L5Q96NT1 182 aaPredicted RBP18.88■□□□□ 0.61
SERP1-201ENST00000239944 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 U2SURPO15042 1029 aaKnown RBP18.88■□□□□ 0.61
SERP1-201ENST00000239944 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
SERP1-201ENST00000239944 CEP152O94986 1710 aa18.87■□□□□ 0.61
SERP1-201ENST00000239944 FAM69CQ0P6D2 419 aa18.87■□□□□ 0.61
SERP1-201ENST00000239944 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
SERP1-201ENST00000239944 TRIM27P14373 513 aa18.87■□□□□ 0.61
SERP1-201ENST00000239944 POLR3AO14802 1390 aaPredicted RBP18.86■□□□□ 0.61
SERP1-201ENST00000239944 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
SERP1-201ENST00000239944 KIDINS220Q9ULH0 1771 aa18.86■□□□□ 0.61
SERP1-201ENST00000239944 POGZQ7Z3K3 1410 aa18.85■□□□□ 0.61
SERP1-201ENST00000239944 L1TD1Q5T7N2 865 aaKnown RBP18.85■□□□□ 0.61
SERP1-201ENST00000239944 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
SERP1-201ENST00000239944 SPHKAPQ2M3C7 1700 aa18.84■□□□□ 0.61
SERP1-201ENST00000239944 LNPKQ9C0E8 428 aa18.84■□□□□ 0.61
SERP1-201ENST00000239944 ZKSCAN2Q63HK3 967 aa18.84■□□□□ 0.61
SERP1-201ENST00000239944 TRPM2O94759 1503 aa18.83■□□□□ 0.61
SERP1-201ENST00000239944 FBLN1P23142 703 aa18.83■□□□□ 0.6
SERP1-201ENST00000239944 CABP2Q9NPB3 220 aa18.83■□□□□ 0.6
SERP1-201ENST00000239944 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
SERP1-201ENST00000239944 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.6
SERP1-201ENST00000239944 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
SERP1-201ENST00000239944 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
SERP1-201ENST00000239944 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 PTPRTO14522 1441 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 CD2BP2O95400 341 aaKnown RBP18.81■□□□□ 0.6
SERP1-201ENST00000239944 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
SERP1-201ENST00000239944 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
SERP1-201ENST00000239944 GAS2L3Q86XJ1 694 aa18.8■□□□□ 0.6
SERP1-201ENST00000239944 NOS1P29475 1434 aa18.8■□□□□ 0.6
SERP1-201ENST00000239944 CHMP5Q9NZZ3 219 aa18.8■□□□□ 0.6
SERP1-201ENST00000239944 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
SERP1-201ENST00000239944 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
SERP1-201ENST00000239944 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
SERP1-201ENST00000239944 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
SERP1-201ENST00000239944 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
SERP1-201ENST00000239944 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
SERP1-201ENST00000239944 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
SERP1-201ENST00000239944 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
SERP1-201ENST00000239944 STK26Q9P289 416 aa18.77■□□□□ 0.6
SERP1-201ENST00000239944 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
SERP1-201ENST00000239944 NEO1Q92859 1461 aa18.77■□□□□ 0.59
SERP1-201ENST00000239944 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
SERP1-201ENST00000239944 TRIM35Q9UPQ4 493 aa18.76■□□□□ 0.59
SERP1-201ENST00000239944 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
SERP1-201ENST00000239944 MLH3Q9UHC1 1453 aa18.76■□□□□ 0.59
SERP1-201ENST00000239944 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
SERP1-201ENST00000239944 TNPO1Q92973 898 aaKnown RBP18.75■□□□□ 0.59
SERP1-201ENST00000239944 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
SERP1-201ENST00000239944 GRPEL1Q9HAV7 217 aa18.75■□□□□ 0.59
SERP1-201ENST00000239944 HECW2Q9P2P5 1572 aa18.75■□□□□ 0.59
SERP1-201ENST00000239944 TET3O43151 1660 aa18.74■□□□□ 0.59
SERP1-201ENST00000239944 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
SERP1-201ENST00000239944 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
SERP1-201ENST00000239944 THUMPD2Q9BTF0 503 aaKnown RBP18.74■□□□□ 0.59
SERP1-201ENST00000239944 TMPOP42166 694 aaKnown RBP18.73■□□□□ 0.59
SERP1-201ENST00000239944 YEATS2Q9ULM3 1422 aa18.72■□□□□ 0.59
SERP1-201ENST00000239944 TSPOAP1O95153 1857 aa18.72■□□□□ 0.59
SERP1-201ENST00000239944 FRMPD1Q5SYB0 1578 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms