RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 PREX1Q8TCU6 1659 aa22.77■■□□□ 1.24
CDKN1B-201ENST00000228872 TESK2Q96S53 571 aa22.77■■□□□ 1.24
CDKN1B-201ENST00000228872 BECN1Q14457 450 aa22.76■■□□□ 1.23
CDKN1B-201ENST00000228872 DNAJC5Q9H3Z4 198 aa22.75■■□□□ 1.23
CDKN1B-201ENST00000228872 VIRMAQ69YN4 1812 aaKnown RBP22.75■■□□□ 1.23
CDKN1B-201ENST00000228872 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
CDKN1B-201ENST00000228872 MYOM2P54296 1465 aa22.74■■□□□ 1.23
CDKN1B-201ENST00000228872 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
CDKN1B-201ENST00000228872 SLKQ9H2G2 1235 aaPredicted RBP22.74■■□□□ 1.23
CDKN1B-201ENST00000228872 PKNOX2Q96KN3 472 aa22.73■■□□□ 1.23
CDKN1B-201ENST00000228872 SLFN5Q08AF3 891 aa22.73■■□□□ 1.23
CDKN1B-201ENST00000228872 SEC24BO95487 1268 aa22.72■■□□□ 1.23
CDKN1B-201ENST00000228872 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDKN1B-201ENST00000228872 PPLO60437 1756 aa22.71■■□□□ 1.23
CDKN1B-201ENST00000228872 IGHDP01880 384 aa22.71■■□□□ 1.23
CDKN1B-201ENST00000228872 ANTXR1Q9H6X2 564 aa22.71■■□□□ 1.23
CDKN1B-201ENST00000228872 GLIPR1L2Q4G1C9 344 aa22.7■■□□□ 1.22
CDKN1B-201ENST00000228872 NLRP1Q9C000 1473 aa22.69■■□□□ 1.22
CDKN1B-201ENST00000228872 PPP2R1AP30153 589 aa22.68■■□□□ 1.22
CDKN1B-201ENST00000228872 TRMT2AQ8IZ69 625 aaKnown RBP22.68■■□□□ 1.22
CDKN1B-201ENST00000228872 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
CDKN1B-201ENST00000228872 TMF1P82094 1093 aa22.67■■□□□ 1.22
CDKN1B-201ENST00000228872 MAPK8IP3Q9UPT6 1336 aa22.67■■□□□ 1.22
CDKN1B-201ENST00000228872 XRCC6P12956 609 aaKnown RBP eCLIP22.66■■□□□ 1.22
CDKN1B-201ENST00000228872 TRHP20396 242 aaPredicted RBP22.65■■□□□ 1.22
CDKN1B-201ENST00000228872 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
CDKN1B-201ENST00000228872 ERVK-7P63135 1459 aa22.65■■□□□ 1.22
CDKN1B-201ENST00000228872 BCAR3O75815 825 aa22.65■■□□□ 1.22
CDKN1B-201ENST00000228872 NAP1L5Q96NT1 182 aaPredicted RBP22.65■■□□□ 1.22
CDKN1B-201ENST00000228872 FSD2A1L4K1 749 aa22.64■■□□□ 1.21
CDKN1B-201ENST00000228872 NKTRP30414 1462 aaKnown RBP22.64■■□□□ 1.21
CDKN1B-201ENST00000228872 PNNQ9H307 717 aaKnown RBP22.64■■□□□ 1.21
CDKN1B-201ENST00000228872 GOLGA6L3A6NEY3 463 aa22.63■■□□□ 1.21
CDKN1B-201ENST00000228872 CLCN1P35523 988 aa22.63■■□□□ 1.21
CDKN1B-201ENST00000228872 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
CDKN1B-201ENST00000228872 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
CDKN1B-201ENST00000228872 SLC52A1Q9NWF4 448 aa22.63■■□□□ 1.21
CDKN1B-201ENST00000228872 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
CDKN1B-201ENST00000228872 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
CDKN1B-201ENST00000228872 ARXQ96QS3 562 aa22.61■■□□□ 1.21
CDKN1B-201ENST00000228872 MYO5BQ9ULV0 1848 aa22.6■■□□□ 1.21
CDKN1B-201ENST00000228872 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
CDKN1B-201ENST00000228872 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
CDKN1B-201ENST00000228872 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
CDKN1B-201ENST00000228872 TBC1D2Q9BYX2 928 aa22.58■■□□□ 1.21
CDKN1B-201ENST00000228872 PANK2Q9BZ23 570 aa22.58■■□□□ 1.21
CDKN1B-201ENST00000228872 AMER1Q5JTC6 1135 aaPredicted RBP22.57■■□□□ 1.2
CDKN1B-201ENST00000228872 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
CDKN1B-201ENST00000228872 CLUAP1Q96AJ1 413 aa22.57■■□□□ 1.2
CDKN1B-201ENST00000228872 TBC1D32Q96NH3 1257 aa22.57■■□□□ 1.2
CDKN1B-201ENST00000228872 PDE3AQ14432 1141 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 IDI1Q13907 227 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 VSIG10Q8N0Z9 540 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 SETBP1Q9Y6X0 1596 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 PIK3C2GO75747 1445 aa22.56■■□□□ 1.2
CDKN1B-201ENST00000228872 HSP90AA1P07900 732 aaKnown RBP22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 MCM4P33991 863 aa22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 E9PSI1 815 aa22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 RRP9O43818 475 aaKnown RBP22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 MLECQ14165 292 aa22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 HSP90AA2PQ14568 343 aaPredicted RBP22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 UPF2Q9HAU5 1272 aaKnown RBP22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
CDKN1B-201ENST00000228872 APAF1O14727 1248 aa22.54■■□□□ 1.2
CDKN1B-201ENST00000228872 FBXO31Q5XUX0 539 aaPredicted RBP22.54■■□□□ 1.2
CDKN1B-201ENST00000228872 ZMYND15Q9H091 742 aa22.54■■□□□ 1.2
CDKN1B-201ENST00000228872 NINLQ9Y2I6 1382 aa22.53■■□□□ 1.2
CDKN1B-201ENST00000228872 GZF1Q9H116 711 aaPredicted RBP22.53■■□□□ 1.2
CDKN1B-201ENST00000228872 ZFYVE9O95405 1425 aa22.52■■□□□ 1.2
CDKN1B-201ENST00000228872 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
CDKN1B-201ENST00000228872 PANK1Q8TE04 598 aa22.51■■□□□ 1.19
CDKN1B-201ENST00000228872 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
CDKN1B-201ENST00000228872 ESF1Q9H501 851 aaKnown RBP22.49■■□□□ 1.19
CDKN1B-201ENST00000228872 DMRT2Q9Y5R5 561 aa22.49■■□□□ 1.19
CDKN1B-201ENST00000228872 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
CDKN1B-201ENST00000228872 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
CDKN1B-201ENST00000228872 MRE11P49959 708 aa22.48■■□□□ 1.19
CDKN1B-201ENST00000228872 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
CDKN1B-201ENST00000228872 TRAK2O60296 914 aa22.47■■□□□ 1.19
CDKN1B-201ENST00000228872 CFAP70Q5T0N1 1121 aa22.47■■□□□ 1.19
CDKN1B-201ENST00000228872 MYO3AQ8NEV4 1616 aa22.47■■□□□ 1.19
CDKN1B-201ENST00000228872 SPRYD3Q8NCJ5 442 aa22.46■■□□□ 1.19
CDKN1B-201ENST00000228872 VGFO15240 615 aaPredicted RBP22.46■■□□□ 1.19
CDKN1B-201ENST00000228872 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
CDKN1B-201ENST00000228872 ADGRB1O14514 1584 aa22.46■■□□□ 1.19
CDKN1B-201ENST00000228872 FER1L4A9Z1Z3 1794 aa22.46■■□□□ 1.19
CDKN1B-201ENST00000228872 PMFBP1Q8TBY8 1022 aa22.45■■□□□ 1.19
CDKN1B-201ENST00000228872 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
CDKN1B-201ENST00000228872 CHMP5Q9NZZ3 219 aa22.44■■□□□ 1.18
CDKN1B-201ENST00000228872 PDZRN3Q9UPQ7 1066 aa22.43■■□□□ 1.18
CDKN1B-201ENST00000228872 A2ML1A8K2U0 1454 aa22.43■■□□□ 1.18
CDKN1B-201ENST00000228872 NPC1L1Q9UHC9 1359 aa22.43■■□□□ 1.18
CDKN1B-201ENST00000228872 NGEFQ8N5V2 710 aa22.42■■□□□ 1.18
CDKN1B-201ENST00000228872 PCDHB15Q9Y5E8 787 aa22.42■■□□□ 1.18
CDKN1B-201ENST00000228872 GRPEL1Q9HAV7 217 aa22.41■■□□□ 1.18
CDKN1B-201ENST00000228872 C3P01024 1663 aa22.41■■□□□ 1.18
CDKN1B-201ENST00000228872 ESPNB1AK53 854 aa22.41■■□□□ 1.18
CDKN1B-201ENST00000228872 MYH16Q9H6N6 1097 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms