RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.14
NOD1-201ENST00000222823 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.14
NOD1-201ENST00000222823 KIF3AQ9Y496 699 aa14.21□□□□□ -0.14
NOD1-201ENST00000222823 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
NOD1-201ENST00000222823 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
NOD1-201ENST00000222823 FRAT2O75474 233 aaPredicted RBP14.2□□□□□ -0.14
NOD1-201ENST00000222823 TMEM132EQ6IEE7 984 aa14.2□□□□□ -0.14
NOD1-201ENST00000222823 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
NOD1-201ENST00000222823 NEXNQ0ZGT2 675 aa14.19□□□□□ -0.14
NOD1-201ENST00000222823 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.19□□□□□ -0.14
NOD1-201ENST00000222823 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
NOD1-201ENST00000222823 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
NOD1-201ENST00000222823 UHRF1BP1Q6BDS2 1440 aa14.19□□□□□ -0.14
NOD1-201ENST00000222823 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
NOD1-201ENST00000222823 C9orf78Q9NZ63 289 aaPredicted RBP14.18□□□□□ -0.14
NOD1-201ENST00000222823 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
NOD1-201ENST00000222823 CLSTN1O94985 981 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 FAM135AQ9P2D6 1515 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 KDM6BO15054 1643 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 PSME1Q06323 249 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 TTC5Q8N0Z6 440 aa14.17□□□□□ -0.14
NOD1-201ENST00000222823 DDX11L8A8MPP1 907 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 GNAI1P63096 354 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
NOD1-201ENST00000222823 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 HMOX1P09601 288 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 TPM4P67936 248 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 SPATA31E1Q6ZUB1 1445 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 REC8O95072 547 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 SF3A1Q15459 793 aaKnown RBP14.16□□□□□ -0.14
NOD1-201ENST00000222823 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
NOD1-201ENST00000222823 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
NOD1-201ENST00000222823 MTHFSP49914 203 aa14.15□□□□□ -0.14
NOD1-201ENST00000222823 EVA1CP58658 441 aa14.15□□□□□ -0.14
NOD1-201ENST00000222823 DIAPH3Q9NSV4 1193 aa14.15□□□□□ -0.14
NOD1-201ENST00000222823 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
NOD1-201ENST00000222823 MSH5O43196 834 aa14.14□□□□□ -0.15
NOD1-201ENST00000222823 PHF14O94880 888 aa14.14□□□□□ -0.15
NOD1-201ENST00000222823 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
NOD1-201ENST00000222823 DUOX2Q9NRD8 1548 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 DISP3Q9P2K9 1392 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 AAMPQ13685 434 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 RUFY2Q8WXA3 655 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
NOD1-201ENST00000222823 BACH2Q9BYV9 841 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 G3V3G9 751 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 LNPKQ9C0E8 428 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
NOD1-201ENST00000222823 FOXD4L6Q3SYB3 417 aaPredicted RBP14.12□□□□□ -0.15
NOD1-201ENST00000222823 FOXD4L3Q6VB84 417 aaPredicted RBP14.12□□□□□ -0.15
NOD1-201ENST00000222823 FAM184AQ8NB25 1140 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
NOD1-201ENST00000222823 CEP170Q5SW79 1584 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 H3BQV1 296 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
NOD1-201ENST00000222823 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 PANK1Q8TE04 598 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 PLCH2O75038 1416 aa14.11□□□□□ -0.15
NOD1-201ENST00000222823 SCAF11Q99590 1463 aaKnown RBP14.1□□□□□ -0.15
NOD1-201ENST00000222823 IFIT2P09913 472 aaKnown RBP14.1□□□□□ -0.15
NOD1-201ENST00000222823 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
NOD1-201ENST00000222823 NLRP6P59044 892 aa14.09□□□□□ -0.15
NOD1-201ENST00000222823 SKOR2Q2VWA4 1001 aaPredicted RBP14.09□□□□□ -0.15
NOD1-201ENST00000222823 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
NOD1-201ENST00000222823 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
NOD1-201ENST00000222823 GSE1Q14687 1217 aa14.09□□□□□ -0.15
NOD1-201ENST00000222823 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.15
NOD1-201ENST00000222823 CPLX2Q6PUV4 134 aaKnown RBP14.08□□□□□ -0.16
NOD1-201ENST00000222823 EIF2AK4Q9P2K8 1649 aaKnown RBP14.08□□□□□ -0.16
NOD1-201ENST00000222823 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
NOD1-201ENST00000222823 G3BP1Q13283 466 aaKnown RBP eCLIP14.08□□□□□ -0.16
NOD1-201ENST00000222823 SLFN5Q08AF3 891 aa14.07□□□□□ -0.16
NOD1-201ENST00000222823 TESK2Q96S53 571 aa14.07□□□□□ -0.16
NOD1-201ENST00000222823 SLC12A5Q9H2X9 1139 aa14.07□□□□□ -0.16
NOD1-201ENST00000222823 CHMP5Q9NZZ3 219 aa14.07□□□□□ -0.16
NOD1-201ENST00000222823 CREBRFQ8IUR6 639 aa14.06□□□□□ -0.16
NOD1-201ENST00000222823 NINLQ9Y2I6 1382 aa14.06□□□□□ -0.16
NOD1-201ENST00000222823 HSP90AB4PQ58FF6 505 aa14.06□□□□□ -0.16
NOD1-201ENST00000222823 NUTM2GQ5VZR2 741 aa14.06□□□□□ -0.16
NOD1-201ENST00000222823 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
NOD1-201ENST00000222823 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
NOD1-201ENST00000222823 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
NOD1-201ENST00000222823 ARID3AQ99856 593 aa14.05□□□□□ -0.16
NOD1-201ENST00000222823 AKAP17AQ02040 695 aaKnown RBP14.05□□□□□ -0.16
NOD1-201ENST00000222823 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
NOD1-201ENST00000222823 INTS3Q68E01 1043 aaKnown RBP14.05□□□□□ -0.16
NOD1-201ENST00000222823 SYTL4Q96C24 671 aaPredicted RBP14.05□□□□□ -0.16
NOD1-201ENST00000222823 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 SYNE3Q6ZMZ3 975 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
NOD1-201ENST00000222823 MARCH6O60337 910 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 C22orf23Q9BZE7 217 aa14.04□□□□□ -0.16
NOD1-201ENST00000222823 BECN2A8MW95 431 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms