RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
H2AFV-201ENST00000222690 STK26Q9P289 416 aa21.84■■□□□ 1.09
H2AFV-201ENST00000222690 ZKSCAN2Q63HK3 967 aa21.84■■□□□ 1.09
H2AFV-201ENST00000222690 DZIP1LQ8IYY4 767 aaKnown RBP21.83■■□□□ 1.09
H2AFV-201ENST00000222690 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.09
H2AFV-201ENST00000222690 CLTCL1P53675 1640 aa21.83■■□□□ 1.08
H2AFV-201ENST00000222690 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
H2AFV-201ENST00000222690 TBC1D32Q96NH3 1257 aa21.82■■□□□ 1.08
H2AFV-201ENST00000222690 TRPM2O94759 1503 aa21.82■■□□□ 1.08
H2AFV-201ENST00000222690 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
H2AFV-201ENST00000222690 NINLQ9Y2I6 1382 aa21.81■■□□□ 1.08
H2AFV-201ENST00000222690 KDM5AP29375 1690 aaKnown RBP21.81■■□□□ 1.08
H2AFV-201ENST00000222690 NOS1P29475 1434 aa21.81■■□□□ 1.08
H2AFV-201ENST00000222690 EXOSC9Q06265 439 aaKnown RBP21.81■■□□□ 1.08
H2AFV-201ENST00000222690 WDR63Q8IWG1 891 aa21.81■■□□□ 1.08
H2AFV-201ENST00000222690 MVPQ14764 893 aaKnown RBP21.8■■□□□ 1.08
H2AFV-201ENST00000222690 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
H2AFV-201ENST00000222690 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
H2AFV-201ENST00000222690 C22orf23Q9BZE7 217 aa21.79■■□□□ 1.08
H2AFV-201ENST00000222690 GGNBP2Q9H3C7 697 aa21.79■■□□□ 1.08
H2AFV-201ENST00000222690 PTPRTO14522 1441 aa21.79■■□□□ 1.08
H2AFV-201ENST00000222690 ABCC1P33527 1531 aa21.77■■□□□ 1.08
H2AFV-201ENST00000222690 L1TD1Q5T7N2 865 aaKnown RBP21.77■■□□□ 1.08
H2AFV-201ENST00000222690 GOLGA6L3A6NEY3 463 aa21.74■■□□□ 1.07
H2AFV-201ENST00000222690 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
H2AFV-201ENST00000222690 MYOM1P52179 1685 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 HSP90AA1P07900 732 aaKnown RBP21.73■■□□□ 1.07
H2AFV-201ENST00000222690 HSCBQ8IWL3 235 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 TRIM27P14373 513 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 SSH1Q8WYL5 1049 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 FOXD4L1Q9NU39 408 aa21.73■■□□□ 1.07
H2AFV-201ENST00000222690 ANTXR1Q9H6X2 564 aa21.72■■□□□ 1.07
H2AFV-201ENST00000222690 NOB1Q9ULX3 412 aaKnown RBP21.72■■□□□ 1.07
H2AFV-201ENST00000222690 CFAP65Q6ZU64 1925 aaKnown RBP21.72■■□□□ 1.07
H2AFV-201ENST00000222690 FANCAO15360 1455 aa21.72■■□□□ 1.07
H2AFV-201ENST00000222690 CHD1O14646 1710 aa21.72■■□□□ 1.07
H2AFV-201ENST00000222690 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
H2AFV-201ENST00000222690 MCM4P33991 863 aa21.71■■□□□ 1.07
H2AFV-201ENST00000222690 RTEL1-TNFRSF6BF6WH68 1400 aa21.7■■□□□ 1.06
H2AFV-201ENST00000222690 AAMPQ13685 434 aa21.7■■□□□ 1.06
H2AFV-201ENST00000222690 RIPK4P57078 832 aa21.69■■□□□ 1.06
H2AFV-201ENST00000222690 PANK2Q9BZ23 570 aa21.69■■□□□ 1.06
H2AFV-201ENST00000222690 ZFYVE16Q7Z3T8 1539 aa21.69■■□□□ 1.06
H2AFV-201ENST00000222690 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
H2AFV-201ENST00000222690 DDX19BQ9UMR2 479 aa21.69■■□□□ 1.06
H2AFV-201ENST00000222690 TMEM57Q8N5G2 664 aa21.68■■□□□ 1.06
H2AFV-201ENST00000222690 ADGRL1O94910 1474 aa21.68■■□□□ 1.06
H2AFV-201ENST00000222690 CHMP5Q9NZZ3 219 aa21.68■■□□□ 1.06
H2AFV-201ENST00000222690 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
H2AFV-201ENST00000222690 ATF7IPQ6VMQ6 1270 aa21.67■■□□□ 1.06
H2AFV-201ENST00000222690 TMPOP42166 694 aaKnown RBP21.67■■□□□ 1.06
H2AFV-201ENST00000222690 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
H2AFV-201ENST00000222690 TRAK2O60296 914 aa21.67■■□□□ 1.06
H2AFV-201ENST00000222690 CEP152O94986 1710 aa21.67■■□□□ 1.06
H2AFV-201ENST00000222690 RRAGDQ9NQL2 400 aaPredicted RBP21.66■■□□□ 1.06
H2AFV-201ENST00000222690 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
H2AFV-201ENST00000222690 ABCA6Q8N139 1617 aa21.66■■□□□ 1.06
H2AFV-201ENST00000222690 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
H2AFV-201ENST00000222690 HSP90AB1P08238 724 aaKnown RBP21.66■■□□□ 1.06
H2AFV-201ENST00000222690 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.063e-6■□□□□ 11
H2AFV-201ENST00000222690 NAP1L5Q96NT1 182 aaPredicted RBP21.64■■□□□ 1.06
H2AFV-201ENST00000222690 CCDC27Q2M243 656 aa21.64■■□□□ 1.05
H2AFV-201ENST00000222690 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
H2AFV-201ENST00000222690 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
H2AFV-201ENST00000222690 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.05
H2AFV-201ENST00000222690 MAP3K4Q9Y6R4 1608 aa21.63■■□□□ 1.05
H2AFV-201ENST00000222690 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
H2AFV-201ENST00000222690 FBLN1P23142 703 aa21.63■■□□□ 1.05
H2AFV-201ENST00000222690 TET3O43151 1660 aa21.62■■□□□ 1.05
H2AFV-201ENST00000222690 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
H2AFV-201ENST00000222690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
H2AFV-201ENST00000222690 IPO8O15397 1037 aaKnown RBP21.61■■□□□ 1.05
H2AFV-201ENST00000222690 MYOM2P54296 1465 aa21.6■■□□□ 1.05
H2AFV-201ENST00000222690 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
H2AFV-201ENST00000222690 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
H2AFV-201ENST00000222690 SBNO2Q9Y2G9 1366 aa21.59■■□□□ 1.05
H2AFV-201ENST00000222690 NPM1P06748 294 aaKnown RBP eCLIP21.59■■□□□ 1.05
H2AFV-201ENST00000222690 THUMPD2Q9BTF0 503 aaKnown RBP21.59■■□□□ 1.05
H2AFV-201ENST00000222690 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
H2AFV-201ENST00000222690 DIAPH1O60610 1272 aaKnown RBP21.58■■□□□ 1.04
H2AFV-201ENST00000222690 SHROOM2Q13796 1616 aa21.57■■□□□ 1.04
H2AFV-201ENST00000222690 HMOX1P09601 288 aa21.57■■□□□ 1.04
H2AFV-201ENST00000222690 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
H2AFV-201ENST00000222690 HDAC1Q13547 482 aaPredicted RBP21.56■■□□□ 1.04
H2AFV-201ENST00000222690 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
H2AFV-201ENST00000222690 TERF2IPQ9NYB0 399 aa21.55■■□□□ 1.04
H2AFV-201ENST00000222690 KIF16BQ96L93 1317 aa21.54■■□□□ 1.04
H2AFV-201ENST00000222690 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
H2AFV-201ENST00000222690 KIF1BO60333 1816 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 CHD1LQ86WJ1 897 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 PRAM1Q96QH2 718 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 CT47B1P0C2W7 299 aaPredicted RBP21.53■■□□□ 1.04
H2AFV-201ENST00000222690 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 DDX11L8A8MPP1 907 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 SMC5Q8IY18 1101 aa21.53■■□□□ 1.04
H2AFV-201ENST00000222690 A0A1W2PP64 1363 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms