RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 NLRP1Q9C000 1473 aa18.88■□□□□ 0.61
TMEM38A-201ENST00000187762 TRIM44Q96DX7 344 aaPredicted RBP18.88■□□□□ 0.61
TMEM38A-201ENST00000187762 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
TMEM38A-201ENST00000187762 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
TMEM38A-201ENST00000187762 TRAK2O60296 914 aa18.87■□□□□ 0.61
TMEM38A-201ENST00000187762 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
TMEM38A-201ENST00000187762 MROH2AA6NES4 1674 aa18.87■□□□□ 0.61
TMEM38A-201ENST00000187762 KIF1BO60333 1816 aa18.87■□□□□ 0.61
TMEM38A-201ENST00000187762 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
TMEM38A-201ENST00000187762 STAC3Q96MF2 364 aa18.86■□□□□ 0.61
TMEM38A-201ENST00000187762 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
TMEM38A-201ENST00000187762 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
TMEM38A-201ENST00000187762 TBC1D2Q9BYX2 928 aa18.84■□□□□ 0.61
TMEM38A-201ENST00000187762 KIDINS220Q9ULH0 1771 aa18.84■□□□□ 0.61
TMEM38A-201ENST00000187762 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
TMEM38A-201ENST00000187762 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
TMEM38A-201ENST00000187762 IFT172Q9UG01 1749 aa18.83■□□□□ 0.61
TMEM38A-201ENST00000187762 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.61
TMEM38A-201ENST00000187762 PIK3C2GO75747 1445 aa18.83■□□□□ 0.61
TMEM38A-201ENST00000187762 EFCAB6Q5THR3 1501 aa18.83■□□□□ 0.6
TMEM38A-201ENST00000187762 ASXL2Q76L83 1435 aa18.83■□□□□ 0.6
TMEM38A-201ENST00000187762 ZNF521Q96K83 1311 aa18.83■□□□□ 0.6
TMEM38A-201ENST00000187762 RIPK4P57078 832 aa18.82■□□□□ 0.6
TMEM38A-201ENST00000187762 MYOM2P54296 1465 aa18.82■□□□□ 0.6
TMEM38A-201ENST00000187762 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
TMEM38A-201ENST00000187762 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.81■□□□□ 0.6
TMEM38A-201ENST00000187762 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
TMEM38A-201ENST00000187762 PDE4CQ08493 712 aa18.8■□□□□ 0.6
TMEM38A-201ENST00000187762 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
TMEM38A-201ENST00000187762 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
TMEM38A-201ENST00000187762 CHGAP10645 457 aaKnown RBP18.79■□□□□ 0.6
TMEM38A-201ENST00000187762 NPC1L1Q9UHC9 1359 aa18.79■□□□□ 0.6
TMEM38A-201ENST00000187762 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
TMEM38A-201ENST00000187762 APAF1O14727 1248 aa18.78■□□□□ 0.6
TMEM38A-201ENST00000187762 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
TMEM38A-201ENST00000187762 OFD1O75665 1012 aa18.77■□□□□ 0.6
TMEM38A-201ENST00000187762 SPRYD3Q8NCJ5 442 aa18.77■□□□□ 0.6
TMEM38A-201ENST00000187762 NOS1P29475 1434 aa18.77■□□□□ 0.6
TMEM38A-201ENST00000187762 TBC1D32Q96NH3 1257 aa18.77■□□□□ 0.6
TMEM38A-201ENST00000187762 TERF1P54274 439 aa18.76■□□□□ 0.59
TMEM38A-201ENST00000187762 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
TMEM38A-201ENST00000187762 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
TMEM38A-201ENST00000187762 CHMP5Q9NZZ3 219 aa18.76■□□□□ 0.59
TMEM38A-201ENST00000187762 IGHDP01880 384 aa18.75■□□□□ 0.59
TMEM38A-201ENST00000187762 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
TMEM38A-201ENST00000187762 FAM13BQ9NYF5 915 aa18.74■□□□□ 0.59
TMEM38A-201ENST00000187762 DDX11L8A8MPP1 907 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 MYO3AQ8NEV4 1616 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 NRXN1Q9ULB1 1477 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 ADGRB3O60242 1522 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 ZNF518AQ6AHZ1 1483 aa18.73■□□□□ 0.59
TMEM38A-201ENST00000187762 GAS2L3Q86XJ1 694 aa18.72■□□□□ 0.59
TMEM38A-201ENST00000187762 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
TMEM38A-201ENST00000187762 GGT6Q6P531 493 aa18.72■□□□□ 0.59
TMEM38A-201ENST00000187762 ZSCAN30Q86W11 494 aa18.71■□□□□ 0.59
TMEM38A-201ENST00000187762 LMTK2Q8IWU2 1503 aa18.71■□□□□ 0.59
TMEM38A-201ENST00000187762 NPATQ14207 1427 aa18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 TRMT2AQ8IZ69 625 aaKnown RBP18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 PPLO60437 1756 aa18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 ZHX1Q9UKY1 873 aaPredicted RBP18.7■□□□□ 0.58
TMEM38A-201ENST00000187762 FRMPD1Q5SYB0 1578 aa18.69■□□□□ 0.58
TMEM38A-201ENST00000187762 BCAR3O75815 825 aa18.69■□□□□ 0.58
TMEM38A-201ENST00000187762 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
TMEM38A-201ENST00000187762 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
TMEM38A-201ENST00000187762 NKTRP30414 1462 aaKnown RBP18.68■□□□□ 0.58
TMEM38A-201ENST00000187762 ZC3H13Q5T200 1668 aaKnown RBP18.68■□□□□ 0.58
TMEM38A-201ENST00000187762 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
TMEM38A-201ENST00000187762 SLC12A5Q9H2X9 1139 aa18.67■□□□□ 0.58
TMEM38A-201ENST00000187762 PPP1R9BQ96SB3 815 aa18.67■□□□□ 0.58
TMEM38A-201ENST00000187762 SETBP1Q9Y6X0 1596 aa18.67■□□□□ 0.58
TMEM38A-201ENST00000187762 SBNO2Q9Y2G9 1366 aa18.66■□□□□ 0.58
TMEM38A-201ENST00000187762 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
TMEM38A-201ENST00000187762 R3HCC1Q9Y3T6 440 aaKnown RBP18.66■□□□□ 0.58
TMEM38A-201ENST00000187762 POGZQ7Z3K3 1410 aa18.65■□□□□ 0.58
TMEM38A-201ENST00000187762 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
TMEM38A-201ENST00000187762 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
TMEM38A-201ENST00000187762 SHPRHQ149N8 1683 aa18.65■□□□□ 0.58
TMEM38A-201ENST00000187762 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 C14orf93Q9H972 538 aaKnown RBP18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 PRDM10Q9NQV6 1147 aa18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 ADGRB1O14514 1584 aa18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 E9PSI1 815 aa18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
TMEM38A-201ENST00000187762 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 ZNF692Q9BU19 519 aaPredicted RBP18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
TMEM38A-201ENST00000187762 SIGLEC1Q9BZZ2 1709 aa18.62■□□□□ 0.57
TMEM38A-201ENST00000187762 DMTNQ08495 405 aa18.62■□□□□ 0.57
TMEM38A-201ENST00000187762 ARID3AQ99856 593 aa18.62■□□□□ 0.57
TMEM38A-201ENST00000187762 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
TMEM38A-201ENST00000187762 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
TMEM38A-201ENST00000187762 UQCRHLA0A096LP55 91 aa18.61■□□□□ 0.57
TMEM38A-201ENST00000187762 UQCRHP07919 91 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms