RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
PDZD4-201ENST00000164640 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
PDZD4-201ENST00000164640 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
PDZD4-201ENST00000164640 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
PDZD4-201ENST00000164640 NUP153P49790 1475 aaKnown RBP18.66■□□□□ 0.58
PDZD4-201ENST00000164640 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
PDZD4-201ENST00000164640 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
PDZD4-201ENST00000164640 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
PDZD4-201ENST00000164640 RBM27Q9P2N5 1060 aaKnown RBP18.65■□□□□ 0.58
PDZD4-201ENST00000164640 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
PDZD4-201ENST00000164640 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.58
PDZD4-201ENST00000164640 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
PDZD4-201ENST00000164640 RIPK4P57078 832 aa18.64■□□□□ 0.57
PDZD4-201ENST00000164640 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
PDZD4-201ENST00000164640 PLB1Q6P1J6 1458 aa18.64■□□□□ 0.57
PDZD4-201ENST00000164640 TRIM27P14373 513 aa18.64■□□□□ 0.57
PDZD4-201ENST00000164640 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
PDZD4-201ENST00000164640 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
PDZD4-201ENST00000164640 CD2BP2O95400 341 aaKnown RBP18.63■□□□□ 0.57
PDZD4-201ENST00000164640 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
PDZD4-201ENST00000164640 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
PDZD4-201ENST00000164640 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
PDZD4-201ENST00000164640 CHD1LQ86WJ1 897 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 SYCE3A1L190 88 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
PDZD4-201ENST00000164640 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 NLRP1Q9C000 1473 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
PDZD4-201ENST00000164640 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
PDZD4-201ENST00000164640 ZSCAN23Q3MJ62 389 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 SLC12A5Q9H2X9 1139 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 A2MP01023 1474 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 CBX1P83916 185 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 RBSNQ9H1K0 784 aa18.6■□□□□ 0.57
PDZD4-201ENST00000164640 WDR63Q8IWG1 891 aa18.59■□□□□ 0.57
PDZD4-201ENST00000164640 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
PDZD4-201ENST00000164640 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
PDZD4-201ENST00000164640 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
PDZD4-201ENST00000164640 TSC1Q92574 1164 aa18.58■□□□□ 0.56
PDZD4-201ENST00000164640 SNX21Q969T3 373 aa18.58■□□□□ 0.56
PDZD4-201ENST00000164640 FAM177BA6PVY3 158 aa18.58■□□□□ 0.56
PDZD4-201ENST00000164640 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
PDZD4-201ENST00000164640 ASXL1Q8IXJ9 1541 aa18.57■□□□□ 0.56
PDZD4-201ENST00000164640 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
PDZD4-201ENST00000164640 NUCB2P80303 420 aa18.57■□□□□ 0.56
PDZD4-201ENST00000164640 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
PDZD4-201ENST00000164640 PIK3C2GO75747 1445 aa18.56■□□□□ 0.56
PDZD4-201ENST00000164640 TBC1D9Q6ZT07 1266 aa18.56■□□□□ 0.56
PDZD4-201ENST00000164640 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
PDZD4-201ENST00000164640 GPRASP1Q5JY77 1395 aa18.55■□□□□ 0.56
PDZD4-201ENST00000164640 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
PDZD4-201ENST00000164640 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
PDZD4-201ENST00000164640 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
PDZD4-201ENST00000164640 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
PDZD4-201ENST00000164640 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
PDZD4-201ENST00000164640 FAM135AQ9P2D6 1515 aa18.54■□□□□ 0.56
PDZD4-201ENST00000164640 ZNF830Q96NB3 372 aaPredicted RBP18.53■□□□□ 0.56
PDZD4-201ENST00000164640 NOL7Q9UMY1 257 aaKnown RBP18.53■□□□□ 0.56
PDZD4-201ENST00000164640 ZKSCAN5Q9Y2L8 839 aa18.53■□□□□ 0.56
PDZD4-201ENST00000164640 SASS6Q6UVJ0 657 aa18.53■□□□□ 0.56
PDZD4-201ENST00000164640 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
PDZD4-201ENST00000164640 HDAC1Q13547 482 aaPredicted RBP18.53■□□□□ 0.56
PDZD4-201ENST00000164640 PKP1Q13835 747 aa18.53■□□□□ 0.56
PDZD4-201ENST00000164640 DYNC1I1O14576 645 aa18.52■□□□□ 0.56
PDZD4-201ENST00000164640 ST18O60284 1047 aa18.52■□□□□ 0.55
PDZD4-201ENST00000164640 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.55
PDZD4-201ENST00000164640 E9PCH4 1651 aa18.52■□□□□ 0.55
PDZD4-201ENST00000164640 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
PDZD4-201ENST00000164640 IGSF3O75054 1194 aa18.51■□□□□ 0.55
PDZD4-201ENST00000164640 CDC45O75419 566 aa18.51■□□□□ 0.55
PDZD4-201ENST00000164640 NUCB1Q02818 461 aa18.51■□□□□ 0.55
PDZD4-201ENST00000164640 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
PDZD4-201ENST00000164640 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
PDZD4-201ENST00000164640 SPDYE4A6NLX3 237 aa18.49■□□□□ 0.55
PDZD4-201ENST00000164640 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
PDZD4-201ENST00000164640 PRDM4Q9UKN5 801 aa18.49■□□□□ 0.55
PDZD4-201ENST00000164640 BMP2KLQ5H9B9 411 aa18.48■□□□□ 0.55
PDZD4-201ENST00000164640 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
PDZD4-201ENST00000164640 NUTM2DQ5VT03 806 aaPredicted RBP18.48■□□□□ 0.55
PDZD4-201ENST00000164640 ZGPATQ8N5A5 531 aaKnown RBP18.48■□□□□ 0.55
PDZD4-201ENST00000164640 SMAP1Q8IYB5 467 aaPredicted RBP18.47■□□□□ 0.55
PDZD4-201ENST00000164640 RAPGEF6Q8TEU7 1601 aa18.47■□□□□ 0.55
PDZD4-201ENST00000164640 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
PDZD4-201ENST00000164640 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
PDZD4-201ENST00000164640 RABEP1Q15276 862 aa18.46■□□□□ 0.55
PDZD4-201ENST00000164640 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
PDZD4-201ENST00000164640 TMEM132EQ6IEE7 984 aa18.46■□□□□ 0.55
PDZD4-201ENST00000164640 CEP170Q5SW79 1584 aa18.46■□□□□ 0.54
PDZD4-201ENST00000164640 ADGBQ8N7X0 1667 aa18.45■□□□□ 0.54
PDZD4-201ENST00000164640 C17orf53Q8N3J3 647 aaPredicted RBP18.45■□□□□ 0.54
PDZD4-201ENST00000164640 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
PDZD4-201ENST00000164640 PPP4R3BQ5MIZ7 849 aa18.45■□□□□ 0.54
PDZD4-201ENST00000164640 GDPD2Q9HCC8 539 aa18.45■□□□□ 0.54
PDZD4-201ENST00000164640 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
PDZD4-201ENST00000164640 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
PDZD4-201ENST00000164640 LMBRD1Q9NUN5 540 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms