RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 SPATA31D1Q6ZQQ2 1576 aa34.55■■■■□ 3.12
RTN4R-201ENST00000043402 USP32Q8NFA0 1604 aa34.54■■■■□ 3.12
RTN4R-201ENST00000043402 STAG3Q9UJ98 1225 aa34.53■■■■□ 3.12
RTN4R-201ENST00000043402 CCDC146Q8IYE0 955 aa34.53■■■■□ 3.12
RTN4R-201ENST00000043402 MORC1Q86VD1 984 aa34.52■■■■□ 3.12
RTN4R-201ENST00000043402 ALKQ9UM73 1620 aa34.52■■■■□ 3.12
RTN4R-201ENST00000043402 YTHDC2Q9H6S0 1430 aaKnown RBP34.52■■■■□ 3.12
RTN4R-201ENST00000043402 CCDC136Q96JN2 1154 aa34.52■■■■□ 3.12
RTN4R-201ENST00000043402 POLR3AO14802 1390 aaPredicted RBP34.51■■■■□ 3.12
RTN4R-201ENST00000043402 ANKRD36BQ8N2N9 1353 aa34.5■■■■□ 3.11
RTN4R-201ENST00000043402 A2ML1A8K2U0 1454 aa34.49■■■■□ 3.11
RTN4R-201ENST00000043402 CGNL1Q0VF96 1302 aa34.47■■■■□ 3.11
RTN4R-201ENST00000043402 PRAM1Q96QH2 718 aa34.47■■■■□ 3.11
RTN4R-201ENST00000043402 TNNT2P45379 298 aaPredicted RBP34.46■■■■□ 3.11
RTN4R-201ENST00000043402 DUSP27Q5VZP5 1158 aa34.46■■■■□ 3.11
RTN4R-201ENST00000043402 EXOC6Q8TAG9 804 aa34.45■■■■□ 3.11
RTN4R-201ENST00000043402 APAF1O14727 1248 aa34.45■■■■□ 3.1
RTN4R-201ENST00000043402 GOLGA2Q08379 1002 aa34.43■■■■□ 3.1
RTN4R-201ENST00000043402 MINK1Q8N4C8 1332 aaPredicted RBP34.42■■■■□ 3.1
RTN4R-201ENST00000043402 SHPRHQ149N8 1683 aa34.42■■■■□ 3.1
RTN4R-201ENST00000043402 SRPK2P78362 688 aaKnown RBP34.41■■■■□ 3.1
RTN4R-201ENST00000043402 PLIN1O60240 522 aa34.4■■■■□ 3.1
RTN4R-201ENST00000043402 POGKQ9P215 609 aa34.4■■■■□ 3.1
RTN4R-201ENST00000043402 RIMS2Q9UQ26 1411 aa34.4■■■■□ 3.1
RTN4R-201ENST00000043402 A0A1W2PP64 1363 aa34.38■■■■□ 3.09
RTN4R-201ENST00000043402 ZMYM3Q14202 1370 aa34.37■■■■□ 3.09
RTN4R-201ENST00000043402 NINLQ9Y2I6 1382 aa34.37■■■■□ 3.09
RTN4R-201ENST00000043402 SLFN5Q08AF3 891 aa34.37■■■■□ 3.09
RTN4R-201ENST00000043402 NSD2O96028 1365 aa34.35■■■■□ 3.09
RTN4R-201ENST00000043402 MTHFSP49914 203 aa34.35■■■■□ 3.09
RTN4R-201ENST00000043402 SETD1AO15047 1707 aaKnown RBP34.34■■■■□ 3.09
RTN4R-201ENST00000043402 TRMT2AQ8IZ69 625 aaKnown RBP34.34■■■■□ 3.09
RTN4R-201ENST00000043402 SPINK5Q9NQ38 1064 aaPredicted RBP34.33■■■■□ 3.09
RTN4R-201ENST00000043402 ATAD2Q6PL18 1390 aa34.33■■■■□ 3.09
RTN4R-201ENST00000043402 ABCC11Q96J66 1382 aa34.32■■■■□ 3.08
RTN4R-201ENST00000043402 CD163L1Q9NR16 1453 aa34.3■■■■□ 3.08
RTN4R-201ENST00000043402 ESF1Q9H501 851 aaKnown RBP34.3■■■■□ 3.08
RTN4R-201ENST00000043402 CDK19Q9BWU1 502 aa34.28■■■■□ 3.08
RTN4R-201ENST00000043402 DMRT2Q9Y5R5 561 aa34.27■■■■□ 3.08
RTN4R-201ENST00000043402 DLC1Q96QB1 1528 aa34.27■■■■□ 3.08
RTN4R-201ENST00000043402 NGEFQ8N5V2 710 aa34.26■■■■□ 3.08
RTN4R-201ENST00000043402 NRXN3Q9Y4C0 1643 aa34.26■■■■□ 3.08
RTN4R-201ENST00000043402 WAPLQ7Z5K2 1190 aa34.25■■■■□ 3.07
RTN4R-201ENST00000043402 TERF2IPQ9NYB0 399 aa34.23■■■■□ 3.07
RTN4R-201ENST00000043402 C20orf194Q5TEA3 1177 aa34.23■■■■□ 3.07
RTN4R-201ENST00000043402 CRBNQ96SW2 442 aa34.23■■■■□ 3.07
RTN4R-201ENST00000043402 CFAP53Q96M91 514 aa34.22■■■■□ 3.07
RTN4R-201ENST00000043402 GGNBP2Q9H3C7 697 aa34.22■■■■□ 3.07
RTN4R-201ENST00000043402 E9PSI1 815 aa34.21■■■■□ 3.07
RTN4R-201ENST00000043402 RUNDC1Q96C34 613 aa34.21■■■■□ 3.07
RTN4R-201ENST00000043402 WWC1Q8IX03 1113 aa34.2■■■■□ 3.07
RTN4R-201ENST00000043402 NKTRP30414 1462 aaKnown RBP34.19■■■■□ 3.06
RTN4R-201ENST00000043402 NLRP1Q9C000 1473 aa34.19■■■■□ 3.06
RTN4R-201ENST00000043402 FYB1O15117 783 aa34.19■■■■□ 3.06
RTN4R-201ENST00000043402 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.19■■■■□ 3.06
RTN4R-201ENST00000043402 IQSEC2Q5JU85 1478 aa34.18■■■■□ 3.06
RTN4R-201ENST00000043402 CABP1Q9NZU7 370 aa34.18■■■■□ 3.06
RTN4R-201ENST00000043402 METP08581 1390 aa34.17■■■■□ 3.06
RTN4R-201ENST00000043402 TNRQ92752 1358 aa34.17■■■■□ 3.06
RTN4R-201ENST00000043402 TCP11L2Q8N4U5 519 aa34.15■■■■□ 3.06
RTN4R-201ENST00000043402 ANKRD26Q9UPS8 1709 aa34.15■■■■□ 3.06
RTN4R-201ENST00000043402 FANCIQ9NVI1 1328 aa34.14■■■■□ 3.06
RTN4R-201ENST00000043402 MED14O60244 1454 aa34.14■■■■□ 3.06
RTN4R-201ENST00000043402 RRP7AQ9Y3A4 280 aaKnown RBP34.13■■■■□ 3.05
RTN4R-201ENST00000043402 HDGFL2Q7Z4V5 671 aaPredicted RBP34.13■■■■□ 3.05
RTN4R-201ENST00000043402 NEUROD2Q15784 382 aa34.12■■■■□ 3.05
RTN4R-201ENST00000043402 ANP32EQ9BTT0 268 aa34.11■■■■□ 3.05
RTN4R-201ENST00000043402 PHF23Q9BUL5 403 aaPredicted RBP34.11■■■■□ 3.05
RTN4R-201ENST00000043402 UBR1Q8IWV7 1749 aa34.09■■■■□ 3.05
RTN4R-201ENST00000043402 U2AF1L5P0DN76 240 aaPredicted RBP34.08■■■■□ 3.05
RTN4R-201ENST00000043402 U2AF1Q01081 240 aaKnown RBP eCLIP34.08■■■■□ 3.05
RTN4R-201ENST00000043402 COL3A1P02461 1466 aaPredicted RBP34.07■■■■□ 3.04
RTN4R-201ENST00000043402 TMEM2Q9UHN6 1383 aa34.07■■■■□ 3.04
RTN4R-201ENST00000043402 TXNDC2Q86VQ3 553 aa34.06■■■■□ 3.04
RTN4R-201ENST00000043402 HDGFP51858 240 aaKnown RBP34.05■■■■□ 3.04
RTN4R-201ENST00000043402 BCAR3O75815 825 aa34.05■■■■□ 3.04
RTN4R-201ENST00000043402 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.05■■■■□ 3.04
RTN4R-201ENST00000043402 KIF20BQ96Q89 1820 aa34.05■■■■□ 3.04
RTN4R-201ENST00000043402 ATP7BP35670 1465 aa34.04■■■■□ 3.04
RTN4R-201ENST00000043402 MSH5O43196 834 aa34.04■■■■□ 3.04
RTN4R-201ENST00000043402 WASLO00401 505 aaPredicted RBP34.02■■■■□ 3.04
RTN4R-201ENST00000043402 KNDC1Q76NI1 1749 aa34.02■■■■□ 3.04
RTN4R-201ENST00000043402 TECPR2O15040 1411 aa34.01■■■■□ 3.04
RTN4R-201ENST00000043402 CCDC27Q2M243 656 aa34.01■■■■□ 3.04
RTN4R-201ENST00000043402 ADGRB2O60241 1585 aa34■■■■□ 3.03
RTN4R-201ENST00000043402 WDR63Q8IWG1 891 aa33.99■■■■□ 3.03
RTN4R-201ENST00000043402 FAM135BQ49AJ0 1406 aa33.99■■■■□ 3.03
RTN4R-201ENST00000043402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.98■■■■□ 3.03
RTN4R-201ENST00000043402 SIRT1Q96EB6 747 aa33.98■■■■□ 3.03
RTN4R-201ENST00000043402 CEBPAP49715 358 aaPredicted RBP33.97■■■■□ 3.03
RTN4R-201ENST00000043402 NCBP3Q53F19 620 aaKnown RBP33.96■■■■□ 3.03
RTN4R-201ENST00000043402 PLEKHF1Q96S99 279 aa33.96■■■■□ 3.03
RTN4R-201ENST00000043402 CPS1P31327 1500 aa33.95■■■■□ 3.03
RTN4R-201ENST00000043402 U2SURPO15042 1029 aaKnown RBP33.95■■■■□ 3.03
RTN4R-201ENST00000043402 PNPLA6Q8IY17 1366 aa33.95■■■■□ 3.03
RTN4R-201ENST00000043402 CPSF1Q10570 1443 aaKnown RBP33.95■■■■□ 3.03
RTN4R-201ENST00000043402 PPIP5K1Q6PFW1 1433 aa33.95■■■■□ 3.02
RTN4R-201ENST00000043402 ADAMTS13Q76LX8 1427 aa33.95■■■■□ 3.02
RTN4R-201ENST00000043402 LTKP29376 864 aa33.93■■■■□ 3.02
RTN4R-201ENST00000043402 KDM2BQ8NHM5 1336 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms