RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Lamc1P02468 1607 aaKnown RBP13.36□□□□□ -0.27
Trim9-205ENSMUST00000221041 Cc2d1aQ8K1A6 943 aa13.35□□□□□ -0.27
Trim9-205ENSMUST00000221041 PalmQ9Z0P4 383 aa13.35□□□□□ -0.27
Trim9-205ENSMUST00000221041 Ccdc183A2AJB1 534 aa13.34□□□□□ -0.27
Trim9-205ENSMUST00000221041 AU022751B1B0V2 589 aa13.34□□□□□ -0.27
Trim9-205ENSMUST00000221041 Iqcf3Q9D498 203 aa13.34□□□□□ -0.27
Trim9-205ENSMUST00000221041 Mcm10Q0VBD2 885 aa13.34□□□□□ -0.27
Trim9-205ENSMUST00000221041 Slc12a5Q91V14 1138 aa13.34□□□□□ -0.27
Trim9-205ENSMUST00000221041 Plcb2A3KGF7 1181 aa13.33□□□□□ -0.28
Trim9-205ENSMUST00000221041 Cabp4Q8VHC5 271 aa13.33□□□□□ -0.28
Trim9-205ENSMUST00000221041 Gapvd1Q6PAR5 1458 aa13.33□□□□□ -0.28
Trim9-205ENSMUST00000221041 Usp16Q99LG0 825 aa13.33□□□□□ -0.28
Trim9-205ENSMUST00000221041 HnrnpmQ9D0E1 729 aaKnown RBP13.33□□□□□ -0.28
Trim9-205ENSMUST00000221041 Ccdc146E9Q9F7 977 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Slc52a2Q9D8F3 450 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Ppp1r3fQ9JIG4 799 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Cabp2Q9JLK4 216 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 MpripP97434 1024 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Trpm2Q91YD4 1506 aa13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Eif4g3Q80XI3 1579 aaKnown RBP13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Smc5Q8CG46 1101 aaKnown RBP13.32□□□□□ -0.28
Trim9-205ENSMUST00000221041 Rrbp1Q99PL5 1605 aaKnown RBP13.31□□□□□ -0.28
Trim9-205ENSMUST00000221041 Gm16486A0A1D5RMD1 1434 aa13.31□□□□□ -0.28
Trim9-205ENSMUST00000221041 Swt1Q9DBQ9 907 aa13.31□□□□□ -0.28
Trim9-205ENSMUST00000221041 Cfap74Q3UY96 1578 aa13.3□□□□□ -0.28
Trim9-205ENSMUST00000221041 Cavin4A2AMM0 362 aa13.3□□□□□ -0.28
Trim9-205ENSMUST00000221041 Map7O88735 730 aa13.3□□□□□ -0.28
Trim9-205ENSMUST00000221041 Usp54Q8BL06 1588 aaKnown RBP13.3□□□□□ -0.28
Trim9-205ENSMUST00000221041 Mast1Q9R1L5 1570 aa13.29□□□□□ -0.28
Trim9-205ENSMUST00000221041 Maco1Q7TQE6 664 aaKnown RBP13.29□□□□□ -0.28
Trim9-205ENSMUST00000221041 Duxf3A0A0N4SV92 674 aa13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 Stk31Q99MW1 1018 aa13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 P2rx7Q9Z1M0 595 aa13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 PtprtQ99M80 1454 aa13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 Rtf1A2AQ19 715 aaKnown RBP13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 Map4k4P97820 1233 aaKnown RBP13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 Aplp1Q03157 653 aa13.28□□□□□ -0.28
Trim9-205ENSMUST00000221041 Rfx1P48377 963 aa13.27□□□□□ -0.28
Trim9-205ENSMUST00000221041 Stk11ipQ3TAA7 1072 aa13.27□□□□□ -0.28
Trim9-205ENSMUST00000221041 Tulp4Q9JIL5 1547 aa13.27□□□□□ -0.28
Trim9-205ENSMUST00000221041 Triml2E9PW10 424 aa13.27□□□□□ -0.29
Trim9-205ENSMUST00000221041 Q3TQI7 289 aaKnown RBP13.27□□□□□ -0.29
Trim9-205ENSMUST00000221041 Kdm5cP41230 1554 aa13.27□□□□□ -0.29
Trim9-205ENSMUST00000221041 PrkcshO08795 521 aa13.26□□□□□ -0.29
Trim9-205ENSMUST00000221041 Sbno1Q689Z5 1390 aa13.26□□□□□ -0.29
Trim9-205ENSMUST00000221041 Gm21190A0A0G2JGJ6 266 aa13.26□□□□□ -0.29
Trim9-205ENSMUST00000221041 Tnpo1Q8BFY9 898 aaKnown RBP13.26□□□□□ -0.29
Trim9-205ENSMUST00000221041 NinlQ6ZQ12 1394 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 KnstrnQ9D9Z1 312 aaKnown RBP13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Rlbp1Q9Z275 317 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Atf7ipQ7TT18 1306 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Htatsf1Q8BGC0 757 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Tex14Q7M6U3 1450 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Kiaa1107Q80TK0 1369 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Klhdc4Q921I2 584 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Ppip5k1A2ARP1 1436 aa13.25□□□□□ -0.29
Trim9-205ENSMUST00000221041 Ggnbp2Q5SV77 696 aa13.24□□□□□ -0.29
Trim9-205ENSMUST00000221041 Ric3Q8BPM6 367 aa13.24□□□□□ -0.29
Trim9-205ENSMUST00000221041 Adamts13Q769J6 1426 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 Ppp2r3aB2RXC8 1150 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 Pnmal2G3X9N3 661 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 Cog6Q8R3I3 657 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 FanciQ8K368 1330 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 Chmp4cQ9D7F7 232 aa13.23□□□□□ -0.29
Trim9-205ENSMUST00000221041 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.22□□□□□ -0.29
Trim9-205ENSMUST00000221041 Kif1bQ60575 1816 aaKnown RBP13.22□□□□□ -0.29
Trim9-205ENSMUST00000221041 Usp19Q3UJD6 1360 aa13.21□□□□□ -0.29
Trim9-205ENSMUST00000221041 Cdc37l1Q9CZP7 335 aa13.21□□□□□ -0.29
Trim9-205ENSMUST00000221041 Kdm2bQ6P1G2 1309 aa13.21□□□□□ -0.3
Trim9-205ENSMUST00000221041 Gli2Q0VGT2 1544 aa13.21□□□□□ -0.3
Trim9-205ENSMUST00000221041 Mre11Q61216 706 aa13.21□□□□□ -0.3
Trim9-205ENSMUST00000221041 IbtkQ6ZPR6 1352 aaKnown RBP13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Gnai1B2RSH2 354 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 CastP51125 788 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 MlecQ6ZQI3 291 aaKnown RBP13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Gnai3Q9DC51 354 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Myo3aQ8K3H5 1613 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Irx3P81067 507 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Plekhm2Q80TQ5 1018 aa13.2□□□□□ -0.3
Trim9-205ENSMUST00000221041 Gm32742A0A1B0GT42 1604 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Prrc2bQ7TPM1 1486 aaKnown RBP13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Kif18aQ91WD7 886 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Ap3b2Q9JME5 1082 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Nphp4P59240 1425 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Q3UPC7 1272 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Rsph4aQ8BYM7 716 aa13.19□□□□□ -0.3
Trim9-205ENSMUST00000221041 Znf518aB2RRF6 1478 aaKnown RBP13.18□□□□□ -0.3
Trim9-205ENSMUST00000221041 Nek4Q9Z1J2 792 aa13.18□□□□□ -0.3
Trim9-205ENSMUST00000221041 Kif21bQ9QXL1 1668 aa13.18□□□□□ -0.3
Trim9-205ENSMUST00000221041 Hsp90b1P08113 802 aaKnown RBP13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 AU019823E9PUQ3 292 aa13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 SkilQ60665 675 aa13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 Atl3Q91YH5 541 aa13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 InsrP15208 1372 aa13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 Nkx1-2P42580 305 aa13.17□□□□□ -0.3
Trim9-205ENSMUST00000221041 Abcc3B2RX12 1523 aa13.16□□□□□ -0.3
Trim9-205ENSMUST00000221041 Lrrc7Q80TE7 1490 aa13.16□□□□□ -0.3
Trim9-205ENSMUST00000221041 Yeats2Q3TUF7 1407 aa13.16□□□□□ -0.3
Trim9-205ENSMUST00000221041 Zcchc11B2RX14 1644 aaKnown RBP13.16□□□□□ -0.3
Trim9-205ENSMUST00000221041 Rnf17Q99MV7 1640 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms