RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 Kdm6bQ5NCY0 1641 aa7.44□□□□□ -1.22
Usp47-202ENSMUST00000210309 AU022751B1B0V2 589 aa7.44□□□□□ -1.22
Usp47-202ENSMUST00000210309 Ccdc60Q8C4J0 545 aa7.44□□□□□ -1.22
Usp47-202ENSMUST00000210309 Iffo2Q8R2V2 512 aa7.44□□□□□ -1.22
Usp47-202ENSMUST00000210309 Mbd3Q9Z2D8 285 aaKnown RBP7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Eif4g3Q80XI3 1579 aaKnown RBP7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Asxl2Q8BZ32 1370 aa7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Kcnh8P59111 1102 aa7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Chrna2Q91X60 512 aa7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Chmp3Q9CQ10 224 aa7.43□□□□□ -1.22
Usp47-202ENSMUST00000210309 Kif16bB1AVY7 1312 aa7.42□□□□□ -1.22
Usp47-202ENSMUST00000210309 Cavin4A2AMM0 362 aa7.42□□□□□ -1.22
Usp47-202ENSMUST00000210309 Ccar1Q8CH18 1146 aaKnown RBP7.42□□□□□ -1.22
Usp47-202ENSMUST00000210309 Arid4aF8VPQ2 1261 aaKnown RBP7.42□□□□□ -1.22
Usp47-202ENSMUST00000210309 Q3TQI7 289 aaKnown RBP7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Yeats2Q3TUF7 1407 aa7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 CntrlA2AL36 2334 aa7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Cfap74Q3UY96 1578 aa7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Znf518aB2RRF6 1478 aaKnown RBP7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Pbrm1Q8BSQ9 1634 aaKnown RBP7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 MecomP14404 1042 aa7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Trim58Q5NCC9 485 aa7.41□□□□□ -1.22
Usp47-202ENSMUST00000210309 Q3UJC8 639 aa7.4□□□□□ -1.22
Usp47-202ENSMUST00000210309 Igf2rQ07113 2483 aaKnown RBP7.4□□□□□ -1.22
Usp47-202ENSMUST00000210309 Ciz1Q8VEH2 845 aa7.4□□□□□ -1.22
Usp47-202ENSMUST00000210309 Abca16E9PWJ7 1678 aa7.4□□□□□ -1.22
Usp47-202ENSMUST00000210309 Pank1Q8K4K6 548 aa7.4□□□□□ -1.22
Usp47-202ENSMUST00000210309 Uspl1Q3ULM6 1089 aa7.4□□□□□ -1.23
Usp47-202ENSMUST00000210309 GphnQ8BUV3 769 aaKnown RBP7.4□□□□□ -1.23
Usp47-202ENSMUST00000210309 Sbno1Q689Z5 1390 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 G3bp1P97855 465 aaKnown RBP7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 TatQ8QZR1 454 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Slc12a5Q91V14 1138 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Prkrip1Q9CWV6 186 aaKnown RBP7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Tarbp1E9Q368 1579 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Dnmt1P13864 1620 aaKnown RBP7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Brpf1B2RRD7 1212 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Atxn3Q9CVD2 355 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Nos1Q9Z0J4 1429 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Dnajc5gQ8C632 165 aa7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Dnttip2Q8R2M2 758 aaKnown RBP7.39□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gpatch11Q3UFS4 262 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 BccipQ9CWI3 316 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Abcc6Q9R1S7 1498 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Ccdc27Q3V036 639 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 GorabQ8BRM2 368 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Swt1Q9DBQ9 907 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 InsrP15208 1372 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Adgrl3Q80TS3 1537 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Ppip5k1A2ARP1 1436 aa7.38□□□□□ -1.23
Usp47-202ENSMUST00000210309 Abcc3B2RX12 1523 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Cdk13Q69ZA1 1511 aaKnown RBP7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Pak3Q61036 559 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Tomm22Q9CPQ3 142 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Hfm1D3Z4R1 1434 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Calcoco2A2A6M5 331 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Fyb1O35601 819 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 EspnQ9ET47 871 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Nectin2P32507 530 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Mroh2aD3Z750 1679 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 SphkapQ6NSW3 1687 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gcc2Q8CHG3 1679 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Prrc2bQ7TPM1 1486 aaKnown RBP7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Tpm3-rs7D3Z2H9 248 aa7.37□□□□□ -1.23
Usp47-202ENSMUST00000210309 Skint5A7XUY5 1461 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 NpatQ8BMA5 1420 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Plekhh1Q80TI1 1356 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Fam208aQ69ZR9 1610 aaKnown RBP7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Rrbp1Q99PL5 1605 aaKnown RBP7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Ttll13A4Q9F6 804 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Samd1D3YXK1 519 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Synj2Q9D2G5 1434 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Setd1bQ8CFT2 1985 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Pip4k2bQ80XI4 416 aa7.36□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gli2Q0VGT2 1544 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Fnbp4Q6ZQ03 1031 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gnai1B2RSH2 354 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 TmpoQ61033 693 aaKnown RBP7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gnai3Q9DC51 354 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Rbm25B2RY56 838 aaKnown RBP7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gm10563F6WIE4 79 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 IbtkQ6ZPR6 1352 aaKnown RBP7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Cep290Q6A078 2472 aa7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Mfap1aC0HKD8 439 aaKnown RBP7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Mfap1bC0HKD9 439 aaKnown RBP7.35□□□□□ -1.23
Usp47-202ENSMUST00000210309 Atf7ipQ7TT18 1306 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 MpripP97434 1024 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Idi2Q8BFZ6 227 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 R3hcc1Q8BSI6 488 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Usp16Q99LG0 825 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Evi5lH3BKQ3 813 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 PalmQ9Z0P4 383 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Tnnt2P50752 301 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Zfyve16Q80U44 1528 aa7.34□□□□□ -1.23
Usp47-202ENSMUST00000210309 Gm16486A0A1D5RMD1 1434 aa7.33□□□□□ -1.24
Usp47-202ENSMUST00000210309 NinlQ6ZQ12 1394 aa7.33□□□□□ -1.24
Usp47-202ENSMUST00000210309 Paf1Q8K2T8 535 aa7.33□□□□□ -1.24
Usp47-202ENSMUST00000210309 Nutm1Q8BHP2 1126 aa7.33□□□□□ -1.24
Usp47-202ENSMUST00000210309 Wdr78E9PYY5 807 aa7.33□□□□□ -1.24
Usp47-202ENSMUST00000210309 GnpatP98192 678 aa7.33□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms