RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Hmox1P14901 289 aa20.33■□□□□ 0.85
Cux1-206ENSMUST00000176172 Nutm1Q8BHP2 1126 aa20.33■□□□□ 0.85
Cux1-206ENSMUST00000176172 Gm10471E9Q1C7 252 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Rec8Q8C5S7 591 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Sirt1Q923E4 737 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Tomm22Q9CPQ3 142 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Gabpb2P81069 414 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Tpm4Q6IRU2 248 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Il16O54824 1322 aa20.32■□□□□ 0.84
Cux1-206ENSMUST00000176172 Zkscan2G3X952 960 aa20.31■□□□□ 0.84
Cux1-206ENSMUST00000176172 Apaf1O88879 1249 aa20.31■□□□□ 0.84
Cux1-206ENSMUST00000176172 Gtf3c3Q3TMP1 882 aa20.31■□□□□ 0.84
Cux1-206ENSMUST00000176172 Kif3aP28741 701 aa20.31■□□□□ 0.84
Cux1-206ENSMUST00000176172 Mroh2bQ7M6Y6 1581 aa20.3■□□□□ 0.84
Cux1-206ENSMUST00000176172 Grin2bQ01097 1482 aa20.3■□□□□ 0.84
Cux1-206ENSMUST00000176172 Ncapd3Q6ZQK0 1506 aa20.3■□□□□ 0.84
Cux1-206ENSMUST00000176172 PsapQ61207 557 aaKnown RBP20.3■□□□□ 0.84
Cux1-206ENSMUST00000176172 Polr3gQ6NXY9 223 aa20.29■□□□□ 0.84
Cux1-206ENSMUST00000176172 SetQ9EQU5 289 aaKnown RBP20.29■□□□□ 0.84
Cux1-206ENSMUST00000176172 Ppp2r3aB2RXC8 1150 aa20.29■□□□□ 0.84
Cux1-206ENSMUST00000176172 Mphosph10Q810V0 681 aaKnown RBP20.28■□□□□ 0.84
Cux1-206ENSMUST00000176172 Isy1Q69ZQ2 285 aaKnown RBP20.28■□□□□ 0.84
Cux1-206ENSMUST00000176172 Hook1Q8BIL5 728 aa20.28■□□□□ 0.84
Cux1-206ENSMUST00000176172 UvssaQ9D479 717 aa20.28■□□□□ 0.84
Cux1-206ENSMUST00000176172 1700010I14RikQ7TPG0 532 aa20.27■□□□□ 0.84
Cux1-206ENSMUST00000176172 Psma5Q9Z2U1 241 aaKnown RBP20.27■□□□□ 0.84
Cux1-206ENSMUST00000176172 Dhx9O70133 1380 aaKnown RBP20.27■□□□□ 0.84
Cux1-206ENSMUST00000176172 Zpr1Q62384 459 aa20.27■□□□□ 0.84
Cux1-206ENSMUST00000176172 Ints3Q7TPD0 1041 aaKnown RBP20.27■□□□□ 0.83
Cux1-206ENSMUST00000176172 Ccp110Q7TSH4 1004 aa20.27■□□□□ 0.83
Cux1-206ENSMUST00000176172 Bcl2l13P59017 434 aa20.26■□□□□ 0.83
Cux1-206ENSMUST00000176172 Cc2d2aQ8CFW7 1633 aa20.26■□□□□ 0.83
Cux1-206ENSMUST00000176172 Ppm1fQ8CGA0 452 aa20.26■□□□□ 0.83
Cux1-206ENSMUST00000176172 Hmgn5Q9JL35 406 aa20.25■□□□□ 0.83
Cux1-206ENSMUST00000176172 Gm14025A2AP89 1413 aa20.25■□□□□ 0.83
Cux1-206ENSMUST00000176172 Zranb3Q6NZP1 1069 aa20.25■□□□□ 0.83
Cux1-206ENSMUST00000176172 Gpatch3Q8BIY1 525 aa20.25■□□□□ 0.83
Cux1-206ENSMUST00000176172 CadpsQ80TJ1 1355 aa20.25■□□□□ 0.83
Cux1-206ENSMUST00000176172 Cfap99A0A140LIX9 648 aa20.24■□□□□ 0.83
Cux1-206ENSMUST00000176172 Eva1cP58659 440 aa20.24■□□□□ 0.83
Cux1-206ENSMUST00000176172 PogkQ80TC5 607 aa20.24■□□□□ 0.83
Cux1-206ENSMUST00000176172 Map7d2A2AG50 781 aa20.23■□□□□ 0.83
Cux1-206ENSMUST00000176172 Ccdc173A0JLY1 547 aa20.23■□□□□ 0.83
Cux1-206ENSMUST00000176172 Fmnl2A2APV2 1086 aa20.23■□□□□ 0.83
Cux1-206ENSMUST00000176172 Hap1O35668 628 aa20.23■□□□□ 0.83
Cux1-206ENSMUST00000176172 TefQ9JLC6 301 aa20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Gnai2P08752 355 aaKnown RBP20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Dusp27Q148W8 1138 aa20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 BcanQ61361 883 aa20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Gcc1Q9D4H2 778 aa20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Mad1l1Q9WTX8 717 aaKnown RBP20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Trim29Q8R2Q0 587 aa20.22■□□□□ 0.83
Cux1-206ENSMUST00000176172 Hoxa7P02830 229 aa20.21■□□□□ 0.83
Cux1-206ENSMUST00000176172 Me1P06801 572 aa20.21■□□□□ 0.83
Cux1-206ENSMUST00000176172 Ubap1lG3UW59 384 aa20.21■□□□□ 0.83
Cux1-206ENSMUST00000176172 MpripP97434 1024 aa20.21■□□□□ 0.83
Cux1-206ENSMUST00000176172 OptnQ8K3K8 584 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 EprsQ8CGC7 1512 aaKnown RBP20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Afap1Q80YS6 731 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Ubxn4Q8VCH8 506 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Chmp4cQ9D7F7 232 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Odf2A3KGV1 830 aaKnown RBP20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Ccdc141E9Q8Q6 1531 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Gimap6Q8K349 305 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Bcl11bQ99PV8 884 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Slc52a2Q9D8F3 450 aa20.2■□□□□ 0.82
Cux1-206ENSMUST00000176172 Cdk19Q8BWD8 501 aa20.19■□□□□ 0.82
Cux1-206ENSMUST00000176172 Nphp1Q9QY53 687 aa20.19■□□□□ 0.82
Cux1-206ENSMUST00000176172 Noc3lQ8VI84 807 aaKnown RBP20.19■□□□□ 0.82
Cux1-206ENSMUST00000176172 NaspQ99MD9 773 aaKnown RBP20.18■□□□□ 0.82
Cux1-206ENSMUST00000176172 Fchsd2Q3USJ8 740 aa20.18■□□□□ 0.82
Cux1-206ENSMUST00000176172 Usp48Q3V0C5 1052 aa20.18■□□□□ 0.82
Cux1-206ENSMUST00000176172 AnlnQ8K298 1121 aaKnown RBP20.18■□□□□ 0.82
Cux1-206ENSMUST00000176172 Smg7Q5RJH6 1138 aaKnown RBP20.18■□□□□ 0.82
Cux1-206ENSMUST00000176172 Mrc2Q64449 1479 aa20.17■□□□□ 0.82
Cux1-206ENSMUST00000176172 Cnnm1Q0GA42 951 aa20.17■□□□□ 0.82
Cux1-206ENSMUST00000176172 Stard3nlQ9DCI3 235 aa20.17■□□□□ 0.82
Cux1-206ENSMUST00000176172 Stk3Q9JI10 497 aa20.17■□□□□ 0.82
Cux1-206ENSMUST00000176172 Tnpo1Q8BFY9 898 aaKnown RBP20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 Tiam1Q60610 1591 aa20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 Hnrnpul1Q8VDM6 859 aaKnown RBP20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 EzrP26040 586 aaKnown RBP20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 Taf3Q5HZG4 932 aa20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 Nol12Q8BG17 217 aa20.16■□□□□ 0.82
Cux1-206ENSMUST00000176172 Fkbp4P30416 458 aa20.15■□□□□ 0.82
Cux1-206ENSMUST00000176172 Rbm28Q8CGC6 750 aaKnown RBP20.15■□□□□ 0.82
Cux1-206ENSMUST00000176172 Lrrcc1Q69ZB0 1026 aa20.15■□□□□ 0.82
Cux1-206ENSMUST00000176172 PtprkP35822 1457 aa20.15■□□□□ 0.82
Cux1-206ENSMUST00000176172 Drc7Q6V3W6 876 aa20.14■□□□□ 0.81
Cux1-206ENSMUST00000176172 Q9D9S1 216 aa20.14■□□□□ 0.81
Cux1-206ENSMUST00000176172 Pip4k2bQ80XI4 416 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 TkfcQ8VC30 578 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Odf2lQ9D478 642 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Dennd6aQ8BH65 605 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Cabp2Q9JLK4 216 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Zkscan1Q8BGS3 561 aaKnown RBP20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Smc2Q8CG48 1191 aaKnown RBP20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Washc2Q6PGL7 1334 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 FosbP13346 338 aa20.13■□□□□ 0.81
Cux1-206ENSMUST00000176172 Ccdc43Q9CR29 222 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms