RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Abcc5Q9R1X5 1436 aa11.46□□□□□ -0.57
Pdgfrb-202ENSMUST00000115274 Rfx7F8VPJ6 1459 aa11.46□□□□□ -0.57
Pdgfrb-202ENSMUST00000115274 Tpd52l1O54818 204 aa11.46□□□□□ -0.57
Pdgfrb-202ENSMUST00000115274 EzrP26040 586 aaKnown RBP11.46□□□□□ -0.57
Pdgfrb-202ENSMUST00000115274 Tomm22Q9CPQ3 142 aa11.46□□□□□ -0.57
Pdgfrb-202ENSMUST00000115274 A2mQ6GQT1 1474 aa11.46□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Mlh3A0A1Y7VMP7 1443 aa11.46□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Tnpo1Q8BFY9 898 aaKnown RBP11.46□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Caskin1Q6P9K8 1431 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Kif20aP97329 887 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Zfp444Q3TDV8 331 aaKnown RBP11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Slc4a10Q5DTL9 1118 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Pank1Q8K4K6 548 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Ccer1Q9CQL2 403 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Neo1P97798 1493 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Ankrd26Q811D2 1581 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Fam13bQ8K2H3 851 aa11.45□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Usp16Q99LG0 825 aa11.44□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Chmp7Q8R1T1 451 aa11.44□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Sh3bgrQ9WUZ7 214 aa11.44□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Q7TT23 1179 aa11.44□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Hmgn5Q9JL35 406 aa11.44□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Tpm3P21107 285 aaKnown RBP11.43□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Smc4Q8CG47 1286 aa11.43□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Kcnh8P59111 1102 aa11.43□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Dnai2A2AC93 623 aa11.43□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Rbm25B2RY56 838 aaKnown RBP11.42□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Cetn4Q8K4K1 168 aa11.42□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Slc52a2Q9D8F3 450 aa11.42□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Paxip1Q6NZQ4 1056 aa11.42□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Ccdc171E9Q1U1 1324 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Pnmal2G3X9N3 661 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Ccdc34Q3UI66 367 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Cavin4A2AMM0 362 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Ric3Q8BPM6 367 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Fez1Q8K0X8 392 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Dixdc1Q80Y83 711 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Slx4Q6P1D7 1565 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Afap1Q80YS6 731 aa11.41□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Gprasp1Q5U4C1 1347 aa11.4□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Tceal9Q9DD24 104 aa11.4□□□□□ -0.58
Pdgfrb-202ENSMUST00000115274 Sptbn5F6UCX4 1208 aa11.4□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Asxl1P59598 1514 aa11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Anp32eP97822 260 aaKnown RBP11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Rnf214Q8BFU3 668 aaKnown RBP11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Triml2E9PW10 424 aa11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 1700010I14RikQ7TPG0 532 aa11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 TatQ8QZR1 454 aa11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 DroshaQ5HZJ0 1373 aaKnown RBP11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Polr3gQ6NXY9 223 aa11.39□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Phactr2B1AVP0 632 aa11.38□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Liat1Q810M6 228 aa11.38□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Ttc21bQ0HA38 1315 aa11.38□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 PogkQ80TC5 607 aa11.38□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Ssh1Q76I79 1042 aa11.38□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Nek4Q9Z1J2 792 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Cdkn1cP49919 348 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Cdk19Q8BWD8 501 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Samd1D3YXK1 519 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Atf3Q60765 181 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Smc3Q9CW03 1217 aaKnown RBP11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 SkilQ60665 675 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Cc2d1aQ8K1A6 943 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Bicd2Q921C5 820 aa11.37□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Fam135aQ6NS59 1506 aa11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Srek1Q8BZX4 494 aaKnown RBP11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Gpatch8A2A6A1 1505 aa11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 AppP12023 770 aa11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Drc7Q6V3W6 876 aa11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 HypkQ9CR41 129 aa11.36□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Polr3aB2RXC6 1390 aa11.35□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Sv2bQ8BG39 683 aa11.35□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Fbxo3Q9DC63 480 aa11.35□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Q9D2X8 372 aa11.35□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Zkscan1Q8BGS3 561 aaKnown RBP11.34□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Ccdc47Q9D024 483 aaKnown RBP11.34□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 PrxO55103 1391 aa11.34□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Tpm1P58771 284 aa11.34□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Cwc15Q9JHS9 229 aaKnown RBP11.34□□□□□ -0.59
Pdgfrb-202ENSMUST00000115274 Apaf1O88879 1249 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Mcm2P97310 904 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Mical1Q8VDP3 1048 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Kif21aQ9QXL2 1672 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Nectin2P32507 530 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Znhit6Q3UFB2 460 aaKnown RBP11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Fchsd2Q3USJ8 740 aa11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 IbtkQ6ZPR6 1352 aaKnown RBP11.33□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Atp10dQ8K2X1 1416 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Gabpb2P81069 414 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Znf692Q3U381 531 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 NaspQ99MD9 773 aaKnown RBP11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Samd9lQ69Z37 1561 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Fancd2Q80V62 1450 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Pdia4P08003 638 aaKnown RBP11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 AcrbpQ3V140 540 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Gimap6Q8K349 305 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Zrsr2Q62377 462 aaKnown RBP11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 BbxQ8VBW5 907 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Sirt1Q923E4 737 aa11.32□□□□□ -0.6
Pdgfrb-202ENSMUST00000115274 Mrvi1Q9WUX5 899 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms