RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Setd1aE9PYH6 1716 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Atf3Q60765 181 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Ddrgk1Q80WW9 315 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Zmym3Q9JLM4 1370 aa8.9□□□□□ -0.98
Scn3a-201ENSMUST00000066432 Cabp4Q8VHC5 271 aa8.9□□□□□ -0.99
Scn3a-201ENSMUST00000066432 BC005561E9Q5E2 1589 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Adcy10Q8C0T9 1614 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Prr29B1ARI9 187 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tmco5bQ80X59 307 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 G3bp1P97855 465 aaKnown RBP8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Hs1bp3Q3TC93 395 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Rnf17Q99MV7 1640 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tpm4Q6IRU2 248 aa8.89□□□□□ -0.99
Scn3a-201ENSMUST00000066432 HypkQ9CR41 129 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Lamc1P02468 1607 aaKnown RBP8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Supt16hQ920B9 1047 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Nup160Q9Z0W3 1402 aaKnown RBP8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Hoxb7P09024 217 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Kdm3bQ6ZPY7 1562 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Pla2r1Q62028 1487 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Fmnl2A2APV2 1086 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tpm1P58771 284 aa8.88□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tpm2P58774 284 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Lmtk2Q3TYD6 1471 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 PaskQ8CEE6 1383 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 TkfcQ8VC30 578 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Gcc1Q9D4H2 778 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Anapc15P60007 132 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ggt6Q6PDE7 497 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Kdm5bQ80Y84 1544 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Fhod3Q76LL6 1578 aa8.87□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Rangap1P46061 589 aaKnown RBP8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Rhot2Q8JZN7 620 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Kiaa1210E9Q0C6 1637 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 MlecQ6ZQI3 291 aaKnown RBP8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Apbb1Q9QXJ1 710 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Kdm5aQ3UXZ9 1690 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Cep152A2AUM9 1736 aaKnown RBP8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Gtf3c5Q8R2T8 520 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Prl7d1P04769 244 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Irx3P81067 507 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ppm1eQ80TL0 749 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ttll5Q8CHB8 1328 aa8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ipo7Q9EPL8 1038 aaKnown RBP8.86□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Atp2b2Q9R0K7 1198 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Psma5Q9Z2U1 241 aaKnown RBP8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tpm3P21107 285 aaKnown RBP8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Inpp5dQ9ES52 1191 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Rad17Q6NXW6 688 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Abcc1O35379 1528 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Sirt1Q923E4 737 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Disp1Q3TDN0 1521 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Hmgn5Q9JL35 406 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Nap1l2P51860 460 aa8.85□□□□□ -0.99
Scn3a-201ENSMUST00000066432 RalgapbQ8BQZ4 1484 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Shroom2A2ALU4 1481 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ccdc60Q8C4J0 545 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Bcl11aQ9QYE3 773 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Kcnh5Q920E3 988 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Ccdc173A0JLY1 547 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 1700010I14RikQ7TPG0 532 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Prex2Q3LAC4 1598 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Abca16E9PWJ7 1678 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Gm21190A0A0G2JGJ6 266 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Rabep1O35551 862 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Neurl4Q5NCX5 1563 aa8.84□□□□□ -0.99
Scn3a-201ENSMUST00000066432 Tpd52l1O54818 204 aa8.84□□□□□ -1
Scn3a-201ENSMUST00000066432 Chmp3Q9CQ10 224 aa8.84□□□□□ -1
Scn3a-201ENSMUST00000066432 Pprc1Q6NZN1 1644 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 Skint5A7XUY5 1461 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 Ncoa1P70365 1447 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 MsnP26041 577 aaKnown RBP8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 Arhgef11Q68FM7 1552 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 Lrrc9Q8CDN9 1456 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 Nap1l3Q794H2 544 aa8.83□□□□□ -1
Scn3a-201ENSMUST00000066432 InsrP15208 1372 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Map4k4P97820 1233 aaKnown RBP8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Rrp12Q6P5B0 1295 aaKnown RBP8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Ccer1Q9CQL2 403 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Becn1O88597 448 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Map3k5O35099 1380 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Ccdc30Q8BVF4 654 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Cdc42bpaQ3UU96 1719 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Casq1O09165 405 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Pak3Q61036 559 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 AnlnQ8K298 1121 aaKnown RBP8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 TatQ8QZR1 454 aa8.82□□□□□ -1
Scn3a-201ENSMUST00000066432 Mink1Q9JM52 1308 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 Irx6Q9ER75 438 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 Cpsf1Q9EPU4 1441 aaKnown RBP8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 SkilQ60665 675 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 Arhgef40Q3UPH7 1517 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 CrbnQ8C7D2 445 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 Smc2Q8CG48 1191 aaKnown RBP8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 Gm21969J3QJZ1 289 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 1700123L14RikQ3V2K7 440 aa8.81□□□□□ -1
Scn3a-201ENSMUST00000066432 EzrP26040 586 aaKnown RBP8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Wwc1Q5SXA9 1104 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Naip5Q9R016 1403 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 TefQ9JLC6 301 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 94.1 ms