RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Ift172Q6VH22 1749 aa20.82■□□□□ 0.92
Trim3-201ENSMUST00000057525 Bcl9Q9D219 1425 aa20.81■□□□□ 0.92
Trim3-201ENSMUST00000057525 Kdm5aQ3UXZ9 1690 aa20.81■□□□□ 0.92
Trim3-201ENSMUST00000057525 Dcaf11Q91VU6 549 aa20.8■□□□□ 0.92
Trim3-201ENSMUST00000057525 Pip4k2bQ80XI4 416 aa20.8■□□□□ 0.92
Trim3-201ENSMUST00000057525 PzpQ61838 1495 aa20.8■□□□□ 0.92
Trim3-201ENSMUST00000057525 Tubgcp6G5E8P0 1769 aa20.78■□□□□ 0.92
Trim3-201ENSMUST00000057525 Sbno1Q689Z5 1390 aa20.78■□□□□ 0.92
Trim3-201ENSMUST00000057525 Scaf11E9PZM7 1456 aaKnown RBP20.78■□□□□ 0.92
Trim3-201ENSMUST00000057525 Abca14E9Q8F8 1683 aa20.77■□□□□ 0.92
Trim3-201ENSMUST00000057525 Gsto1O09131 240 aa20.77■□□□□ 0.92
Trim3-201ENSMUST00000057525 Slit3Q9WVB4 1523 aa20.77■□□□□ 0.92
Trim3-201ENSMUST00000057525 Gm16486A0A1D5RMD1 1434 aa20.76■□□□□ 0.91
Trim3-201ENSMUST00000057525 MaddQ80U28 1577 aa20.75■□□□□ 0.91
Trim3-201ENSMUST00000057525 NgefQ8CHT1 710 aa20.75■□□□□ 0.91
Trim3-201ENSMUST00000057525 InsrP15208 1372 aa20.75■□□□□ 0.91
Trim3-201ENSMUST00000057525 Slc4a2P13808 1237 aaKnown RBP20.73■□□□□ 0.91
Trim3-201ENSMUST00000057525 Q7TT23 1179 aa20.72■□□□□ 0.91
Trim3-201ENSMUST00000057525 Rpgrip1lQ8CG73 1264 aa20.72■□□□□ 0.91
Trim3-201ENSMUST00000057525 Kif7B7ZNG0 1348 aa20.72■□□□□ 0.91
Trim3-201ENSMUST00000057525 Sox12Q04890 314 aa20.71■□□□□ 0.91
Trim3-201ENSMUST00000057525 Plekhg1F6S200 1446 aa20.71■□□□□ 0.91
Trim3-201ENSMUST00000057525 Q3UJC8 639 aa20.71■□□□□ 0.91
Trim3-201ENSMUST00000057525 Tmem94Q7TSH8 1360 aa20.7■□□□□ 0.9
Trim3-201ENSMUST00000057525 NrdcQ8BHG1 1161 aa20.7■□□□□ 0.9
Trim3-201ENSMUST00000057525 Brwd3A2AHJ4 1799 aa20.68■□□□□ 0.9
Trim3-201ENSMUST00000057525 Rims2Q9EQZ7 1530 aa20.67■□□□□ 0.9
Trim3-201ENSMUST00000057525 Nwd1A6H603 1563 aa20.67■□□□□ 0.9
Trim3-201ENSMUST00000057525 PnisrA2AJT4 805 aaKnown RBP20.66■□□□□ 0.9
Trim3-201ENSMUST00000057525 Anp32bQ9EST5 272 aaKnown RBP20.66■□□□□ 0.9
Trim3-201ENSMUST00000057525 Rimbp3Q3V0F0 1606 aa20.65■□□□□ 0.9
Trim3-201ENSMUST00000057525 Gm10563F6WIE4 79 aa20.64■□□□□ 0.89
Trim3-201ENSMUST00000057525 Cps1Q8C196 1500 aa20.64■□□□□ 0.89
Trim3-201ENSMUST00000057525 NktrP30415 1453 aa20.63■□□□□ 0.89
Trim3-201ENSMUST00000057525 Pik3r4Q8VD65 1358 aa20.63■□□□□ 0.89
Trim3-201ENSMUST00000057525 Ppp2r1aQ76MZ3 589 aa20.63■□□□□ 0.89
Trim3-201ENSMUST00000057525 Usp32F8VPZ3 1604 aa20.63■□□□□ 0.89
Trim3-201ENSMUST00000057525 Map3k19E9Q3S4 1311 aa20.62■□□□□ 0.89
Trim3-201ENSMUST00000057525 Scn4aQ9ER60 1841 aa20.62■□□□□ 0.89
Trim3-201ENSMUST00000057525 NinlQ6ZQ12 1394 aa20.6■□□□□ 0.89
Trim3-201ENSMUST00000057525 Pik3c2bE9QAN8 1632 aa20.59■□□□□ 0.89
Trim3-201ENSMUST00000057525 FanciQ8K368 1330 aa20.59■□□□□ 0.89
Trim3-201ENSMUST00000057525 Cyb5rlB1AS42 316 aa20.59■□□□□ 0.89
Trim3-201ENSMUST00000057525 Idi1P58044 227 aa20.58■□□□□ 0.89
Trim3-201ENSMUST00000057525 Nlrp6Q91WS2 869 aa20.57■□□□□ 0.88
Trim3-201ENSMUST00000057525 Rreb1Q3UH06 1700 aaKnown RBP20.56■□□□□ 0.88
Trim3-201ENSMUST00000057525 Evi5lH3BKQ3 813 aa20.56■□□□□ 0.88
Trim3-201ENSMUST00000057525 Med1Q925J9 1575 aa20.55■□□□□ 0.88
Trim3-201ENSMUST00000057525 Rapgef3Q8VCC8 918 aa20.54■□□□□ 0.88
Trim3-201ENSMUST00000057525 Rab3gap2Q8BMG7 1366 aa20.54■□□□□ 0.88
Trim3-201ENSMUST00000057525 Arap3Q8R5G7 1538 aa20.54■□□□□ 0.88
Trim3-201ENSMUST00000057525 Tns3Q5SSZ5 1440 aa20.53■□□□□ 0.88
Trim3-201ENSMUST00000057525 Ecm2Q5FW85 670 aa20.53■□□□□ 0.88
Trim3-201ENSMUST00000057525 Kif16bB1AVY7 1312 aa20.53■□□□□ 0.88
Trim3-201ENSMUST00000057525 Idi2Q8BFZ6 227 aa20.53■□□□□ 0.88
Trim3-201ENSMUST00000057525 Zscan21Q07231 555 aa20.51■□□□□ 0.87
Trim3-201ENSMUST00000057525 Phlpp1Q8CHE4 1687 aa20.51■□□□□ 0.87
Trim3-201ENSMUST00000057525 Slain2Q8CI08 581 aa20.51■□□□□ 0.87
Trim3-201ENSMUST00000057525 Stra8P70278 393 aa20.5■□□□□ 0.87
Trim3-201ENSMUST00000057525 Kif20bQ80WE4 1774 aaKnown RBP20.49■□□□□ 0.87
Trim3-201ENSMUST00000057525 Birc3O08863 600 aa20.49■□□□□ 0.87
Trim3-201ENSMUST00000057525 Gprasp1Q5U4C1 1347 aa20.49■□□□□ 0.87
Trim3-201ENSMUST00000057525 Nrxn3Q6P9K9 1571 aa20.49■□□□□ 0.87
Trim3-201ENSMUST00000057525 Nrxn1Q9CS84 1514 aa20.48■□□□□ 0.87
Trim3-201ENSMUST00000057525 Esx1O88933 382 aa20.48■□□□□ 0.87
Trim3-201ENSMUST00000057525 CatipB9EKE5 520 aa20.47■□□□□ 0.87
Trim3-201ENSMUST00000057525 Ap3b2Q9JME5 1082 aa20.47■□□□□ 0.87
Trim3-201ENSMUST00000057525 P2rx7Q9Z1M0 595 aa20.46■□□□□ 0.87
Trim3-201ENSMUST00000057525 Thsd7aQ69ZU6 1645 aa20.46■□□□□ 0.87
Trim3-201ENSMUST00000057525 Lmtk3Q5XJV6 1424 aa20.46■□□□□ 0.87
Trim3-201ENSMUST00000057525 Tnrc6bQ8BKI2 1810 aaKnown RBP20.45■□□□□ 0.86
Trim3-201ENSMUST00000057525 Cald1E9QA15 768 aaKnown RBP20.45■□□□□ 0.86
Trim3-201ENSMUST00000057525 Tex14Q7M6U3 1450 aa20.45■□□□□ 0.86
Trim3-201ENSMUST00000057525 Adgrl1Q80TR1 1466 aa20.45■□□□□ 0.86
Trim3-201ENSMUST00000057525 D430041D05RikF6ZGR6 1678 aa20.44■□□□□ 0.86
Trim3-201ENSMUST00000057525 Rad21Q61550 635 aaKnown RBP20.44■□□□□ 0.86
Trim3-201ENSMUST00000057525 PtpruB1AUH1 1446 aa20.44■□□□□ 0.86
Trim3-201ENSMUST00000057525 Ltbp4Q8K4G1 1666 aa20.43■□□□□ 0.86
Trim3-201ENSMUST00000057525 C3P01027 1663 aa20.43■□□□□ 0.86
Trim3-201ENSMUST00000057525 Slc35g1Q8BY79 368 aa20.42■□□□□ 0.86
Trim3-201ENSMUST00000057525 Eif5bQ05D44 1216 aaKnown RBP20.42■□□□□ 0.86
Trim3-201ENSMUST00000057525 Amigo3Q8C2S7 508 aa20.42■□□□□ 0.86
Trim3-201ENSMUST00000057525 Tcerg1Q8CGF7 1100 aaKnown RBP20.41■□□□□ 0.86
Trim3-201ENSMUST00000057525 NalcnQ8BXR5 1738 aa20.41■□□□□ 0.86
Trim3-201ENSMUST00000057525 Znf710Q3U288 666 aa20.41■□□□□ 0.86
Trim3-201ENSMUST00000057525 Col14a1Q80X19 1797 aa20.4■□□□□ 0.86
Trim3-201ENSMUST00000057525 Sirt1Q923E4 737 aa20.4■□□□□ 0.86
Trim3-201ENSMUST00000057525 Abcc10Q8R4P9 1501 aa20.4■□□□□ 0.86
Trim3-201ENSMUST00000057525 Ddx17Q501J6 650 aaKnown RBP20.39■□□□□ 0.85
Trim3-201ENSMUST00000057525 C5P06684 1680 aa20.38■□□□□ 0.85
Trim3-201ENSMUST00000057525 GnpatP98192 678 aa20.37■□□□□ 0.85
Trim3-201ENSMUST00000057525 Als2Q920R0 1651 aa20.36■□□□□ 0.85
Trim3-201ENSMUST00000057525 Chd4Q6PDQ2 1915 aaKnown RBP20.36■□□□□ 0.85
Trim3-201ENSMUST00000057525 Ofd1Q80Z25 1017 aa20.36■□□□□ 0.85
Trim3-201ENSMUST00000057525 Sipa1l2Q80TE4 1722 aa20.36■□□□□ 0.85
Trim3-201ENSMUST00000057525 IbtkQ6ZPR6 1352 aaKnown RBP20.35■□□□□ 0.85
Trim3-201ENSMUST00000057525 CrbnQ8C7D2 445 aa20.35■□□□□ 0.85
Trim3-201ENSMUST00000057525 N4bp2F8VQG7 1678 aaKnown RBP20.35■□□□□ 0.85
Trim3-201ENSMUST00000057525 Kiaa1107Q80TK0 1369 aa20.34■□□□□ 0.85
Trim3-201ENSMUST00000057525 Iqsec2Q5DU25 1478 aa20.33■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms