RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Prex1Q69ZK0 1650 aa20.76■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Pabpn1Q8CCS6 302 aaKnown RBP20.75■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Rims1Q99NE5 1463 aa20.74■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Ralbp1Q62172 648 aa20.74■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Cep152A2AUM9 1736 aaKnown RBP20.74■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Shq1Q7TMX5 569 aa20.73■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Tsen2Q6P7W5 460 aa20.72■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Ksr2Q3UVC0 959 aa20.72■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Ttc41Q692V3 1318 aa20.71■□□□□ 0.91
Ckap4-201ENSMUST00000053871 Cald1E9QA15 768 aaKnown RBP20.71■□□□□ 0.91
Ckap4-201ENSMUST00000053871 CenpjQ569L8 1344 aa20.7■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Cdk5rap2Q8K389 1822 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Iqcf3Q9D498 203 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 DaxxO35613 739 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Adgrb3Q80ZF8 1522 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Abca8aQ8K442 1620 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Tmem131lQ3U3D7 1597 aa20.69■□□□□ 0.9
Ckap4-201ENSMUST00000053871 NudcO35685 332 aaKnown RBP20.67■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Smc5Q8CG46 1101 aaKnown RBP20.67■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Senp3Q9EP97 568 aaKnown RBP20.67■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Clasp1Q80TV8 1535 aaKnown RBP20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Q9D9H8 365 aa20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Sart3Q9JLI8 962 aaKnown RBP20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Efcab6Q6P1E8 1516 aa20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Lrrc7Q80TE7 1490 aa20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 IbtkQ6ZPR6 1352 aaKnown RBP20.66■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Gm156Q58A37 223 aa20.65■□□□□ 0.9
Ckap4-201ENSMUST00000053871 Gprasp1Q5U4C1 1347 aa20.64■□□□□ 0.9
Ckap4-201ENSMUST00000053871 PalldQ9ET54 1408 aa20.64■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Utp14aQ640M1 767 aaKnown RBP20.63■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Scaf11E9PZM7 1456 aaKnown RBP20.63■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Map4k4P97820 1233 aaKnown RBP20.62■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Talpid3E9PV87 1520 aa20.62■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Ehbp1l1Q99MS7 1716 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Ak7Q9D2H2 614 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Myom2Q14BI5 1463 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Nkx1-2P42580 305 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Trim58Q5NCC9 485 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Dnai1Q8C0M8 701 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Cluap1Q8R3P7 413 aa20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Eif2s2Q99L45 331 aaKnown RBP20.61■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Hsp90aa1P07901 733 aaKnown RBP20.6■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Znf330Q922H9 316 aa20.6■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Znf316Q6PGE4 1016 aa20.6■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Myom1Q62234 1667 aaKnown RBP20.6■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Mapk8ip3Q9ESN9 1337 aa20.6■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Hsp90ab1P11499 724 aaKnown RBP20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 4933416C03RikQ3V063 378 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Slc52a2Q9D8F3 450 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Rlbp1Q9Z275 317 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Yeats2Q3TUF7 1407 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 InsrP15208 1372 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Uggt1Q6P5E4 1551 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Topbp1Q6ZQF0 1515 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Dusp27Q148W8 1138 aa20.59■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Duxf3A0A0N4SV92 674 aa20.58■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Ppp1r3fQ9JIG4 799 aa20.58■□□□□ 0.89
Ckap4-201ENSMUST00000053871 Afap1Q80YS6 731 aa20.58■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Ppp1r18Q8BQ30 594 aa20.57■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Atp2b2Q9R0K7 1198 aa20.57■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Cfap65Q3V0B4 1847 aa20.55■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Skint5A7XUY5 1461 aa20.55■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Atp10aO54827 1508 aa20.55■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Prrc2bQ7TPM1 1486 aaKnown RBP20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Dip2cE9PWR4 1557 aa20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 DnmbpQ6TXD4 1580 aa20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Ipo8Q7TMY7 1010 aa20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Cdk19Q8BWD8 501 aa20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 KarsQ99MN1 595 aaKnown RBP20.53■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Birc3O08863 600 aa20.52■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Gsto1O09131 240 aa20.52■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Ccar1Q8CH18 1146 aaKnown RBP20.52■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Depdc5P61460 1591 aa20.52■□□□□ 0.88
Ckap4-201ENSMUST00000053871 Ppm1gQ61074 542 aa20.51■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Gm6268A2A3U9 297 aa20.51■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Ccdc183A2AJB1 534 aa20.51■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Plin1Q8CGN5 517 aa20.5■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Nutm1Q8BHP2 1126 aa20.5■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Plppr3Q7TPB0 716 aa20.49■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Asxl2Q8BZ32 1370 aa20.49■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Knl1Q66JQ7 1612 aa20.48■□□□□ 0.87
Ckap4-201ENSMUST00000053871 NinlQ6ZQ12 1394 aa20.48■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Ccdc60Q8C4J0 545 aa20.48■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Pnmal2G3X9N3 661 aa20.47■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Trpm1Q2TV84 1622 aa20.47■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Sipa1l1Q8C0T5 1782 aa20.46■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Nectin2P32507 530 aa20.46■□□□□ 0.87
Ckap4-201ENSMUST00000053871 RereQ80TZ9 1558 aa20.45■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Cdc42bpgQ80UW5 1551 aa20.45■□□□□ 0.87
Ckap4-201ENSMUST00000053871 Tmco5bQ80X59 307 aa20.45■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Tecpr2Q3UH45 1423 aa20.45■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Slc12a5Q91V14 1138 aa20.45■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Cep170bQ80U49 1574 aa20.44■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Mroh1E0CZ22 1640 aa20.44■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Ino80Q6ZPV2 1559 aa20.43■□□□□ 0.86
Ckap4-201ENSMUST00000053871 MaddQ80U28 1577 aa20.43■□□□□ 0.86
Ckap4-201ENSMUST00000053871 PalmQ9Z0P4 383 aa20.43■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Rbm25B2RY56 838 aaKnown RBP20.42■□□□□ 0.86
Ckap4-201ENSMUST00000053871 Znf521Q6KAS7 1311 aa20.42■□□□□ 0.86
Ckap4-201ENSMUST00000053871 AdgbG3UZ78 1657 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms