RNA–Protein interactions for RNA: ENSMUST00000049262.13

Sirpa-201, Transcript of Tyrosine-protein phosphatase non-receptor type substrate 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sirpa, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpa-201ENSMUST00000049262 Usp40Q8BWR4 1235 aa13.67□□□□□ -0.22
Sirpa-201ENSMUST00000049262 ShprhQ7TPQ3 1674 aa13.67□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Pnmal2G3X9N3 661 aa13.66□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Rlbp1Q9Z275 317 aa13.66□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Xrn1P97789 1719 aaKnown RBP13.66□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Neurl4Q5NCX5 1563 aa13.66□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Rfx1P48377 963 aa13.65□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Trim58Q5NCC9 485 aa13.65□□□□□ -0.22
Sirpa-201ENSMUST00000049262 SlkO54988 1233 aa13.65□□□□□ -0.22
Sirpa-201ENSMUST00000049262 Nos1Q9Z0J4 1429 aa13.64□□□□□ -0.23
Sirpa-201ENSMUST00000049262 GorabQ8BRM2 368 aa13.64□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Depdc5P61460 1591 aa13.64□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Nutm1Q8BHP2 1126 aa13.63□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Ylpm1Q9R0I7 1386 aaKnown RBP13.63□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Duxf3A0A0N4SV92 674 aa13.63□□□□□ -0.23
Sirpa-201ENSMUST00000049262 ErbinQ80TH2 1402 aa13.63□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Stag3O70576 1240 aa13.63□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Adgrl3Q80TS3 1537 aa13.62□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Sptbn5F6UCX4 1208 aa13.62□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Ralbp1Q62172 648 aa13.62□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Ppp2r3aB2RXC8 1150 aa13.62□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Pdcl3Q8BVF2 240 aa13.61□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Kdm5cP41230 1554 aa13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Tmco5bQ80X59 307 aa13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Trim44Q9QXA7 346 aa13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Znf518aB2RRF6 1478 aaKnown RBP13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 GsdmaQ9EST1 446 aa13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Robo2Q7TPD3 1470 aa13.6□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Ppp1r3fQ9JIG4 799 aa13.59□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Col17a1Q07563 1470 aa13.59□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Rabep1O35551 862 aa13.59□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Tex14Q7M6U3 1450 aa13.59□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Paxip1Q6NZQ4 1056 aa13.58□□□□□ -0.23
Sirpa-201ENSMUST00000049262 Gli2Q0VGT2 1544 aa13.58□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Iqgap1Q9JKF1 1657 aaKnown RBP13.58□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Tsen2Q6P7W5 460 aa13.58□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Abcc6Q9R1S7 1498 aa13.58□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Ssh1Q76I79 1042 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Stk26Q99JT2 416 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Abca6Q8K441 1624 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Abca17E9PX95 1733 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Adamts13Q769J6 1426 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Stk11ipQ3TAA7 1072 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Nectin2P32507 530 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Aplp1Q03157 653 aa13.57□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Tulp4Q9JIL5 1547 aa13.56□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Ppip5k1A2ARP1 1436 aa13.56□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Yeats2Q3TUF7 1407 aa13.56□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Exosc9Q9JHI7 438 aaKnown RBP13.56□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Myo5cE9Q1F5 1742 aa13.56□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Kcnn1Q9EQR3 537 aa13.55□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Catsper2A2ARP9 588 aa13.55□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Plch2A2AP18 1501 aa13.55□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Ccdc60Q8C4J0 545 aa13.54□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Usp19Q3UJD6 1360 aa13.54□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Uspl1Q3ULM6 1089 aa13.54□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Plin1Q8CGN5 517 aa13.54□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Afap1Q80YS6 731 aa13.54□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Ccar1Q8CH18 1146 aaKnown RBP13.53□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Gm16486A0A1D5RMD1 1434 aa13.53□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Il4rP16382 810 aa13.53□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Cog6Q8R3I3 657 aa13.53□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Cfap65Q3V0B4 1847 aa13.52□□□□□ -0.24
Sirpa-201ENSMUST00000049262 Map7O88735 730 aa13.52□□□□□ -0.25
Sirpa-201ENSMUST00000049262 AatkQ80YE4 1365 aa13.52□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Ythdc1E9Q5K9 736 aaKnown RBP13.52□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Mcm4P49717 862 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Zranb1Q7M760 708 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Gtf2a1Q99PM3 378 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 AnkarA2RT91 1465 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 IbspQ61711 324 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Erich6bQ9D4S6 220 aa13.51□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Puf60Q3UEB3 564 aaKnown RBP13.5□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Dip2cE9PWR4 1557 aa13.5□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Q4VA45 678 aa13.5□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Prex1Q69ZK0 1650 aa13.5□□□□□ -0.25
Sirpa-201ENSMUST00000049262 AU019823E9PUQ3 292 aa13.49□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Atp10aO54827 1508 aa13.49□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Dusp27Q148W8 1138 aa13.49□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Fndc1E9Q043 1732 aa13.48□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Kif18aQ91WD7 886 aa13.48□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Atf7ipQ7TT18 1306 aa13.48□□□□□ -0.25
Sirpa-201ENSMUST00000049262 PtmaP26350 111 aa13.48□□□□□ -0.25
Sirpa-201ENSMUST00000049262 1700019A02RikA0A087WPV9 146 aa13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 IqubQ8CDK3 788 aa13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Kiaa1107Q80TK0 1369 aa13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Ccdc146E9Q9F7 977 aa13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Tbc1d32Q3URV1 1296 aa13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Maco1Q7TQE6 664 aaKnown RBP13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Tfip11Q9ERA6 838 aaKnown RBP13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Clasp1Q80TV8 1535 aaKnown RBP13.47□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Phf14Q9D4H9 881 aa13.46□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Chmp4cQ9D7F7 232 aa13.46□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Ttc41Q692V3 1318 aa13.46□□□□□ -0.25
Sirpa-201ENSMUST00000049262 Nsfl1cQ9CZ44 370 aaKnown RBP13.46□□□□□ -0.26
Sirpa-201ENSMUST00000049262 Iqgap3F8VQ29 1632 aa13.45□□□□□ -0.26
Sirpa-201ENSMUST00000049262 RereQ80TZ9 1558 aa13.45□□□□□ -0.26
Sirpa-201ENSMUST00000049262 KnstrnQ9D9Z1 312 aaKnown RBP13.45□□□□□ -0.26
Sirpa-201ENSMUST00000049262 Terf2O35144 541 aa13.45□□□□□ -0.26
Sirpa-201ENSMUST00000049262 U2surpQ6NV83 1029 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms