RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Adamts13Q769J6 1426 aa10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Golga2Q921M4 999 aa10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Usp19Q3UJD6 1360 aa10.48□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Kif7B7ZNG0 1348 aa10.47□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Sart1Q9Z315 806 aaKnown RBP10.47□□□□□ -0.73
Cdc40-201ENSMUST00000044166 MycnP03966 462 aaKnown RBP10.47□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Trim58Q5NCC9 485 aa10.47□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Pank1Q8K4K6 548 aa10.47□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Sptbn5F6UCX4 1208 aa10.46□□□□□ -0.73
Cdc40-201ENSMUST00000044166 PogkQ80TC5 607 aa10.46□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Cul9Q80TT8 1865 aa10.46□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Pdia4P08003 638 aaKnown RBP10.46□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Kdm2aP59997 1161 aa10.46□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Fam208aQ69ZR9 1610 aaKnown RBP10.46□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Phf14Q9D4H9 881 aa10.46□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Znf521Q6KAS7 1311 aa10.45□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Mast1Q9R1L5 1570 aa10.45□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Ppp2r3aB2RXC8 1150 aa10.45□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Stac3Q8BZ71 360 aa10.45□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Fancd2Q80V62 1450 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Uspl1Q3ULM6 1089 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Jph4Q80WT0 628 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Gys2Q8VCB3 704 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Spag9Q58A65 1321 aaKnown RBP10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Rabep1O35551 862 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Pde4cQ3UEI1 686 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Rrp12Q6P5B0 1295 aaKnown RBP10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Os9Q8K2C7 672 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Edc4Q3UJB9 1406 aaKnown RBP10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Col17a1Q07563 1470 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Arhgap5P97393 1501 aa10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Tnpo1Q8BFY9 898 aaKnown RBP10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 KarsQ99MN1 595 aaKnown RBP10.44□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Kif20aP97329 887 aa10.43□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Pola1P33609 1465 aa10.43□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Tulp4Q9JIL5 1547 aa10.43□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Neurl4Q5NCX5 1563 aa10.43□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Duxf3A0A0N4SV92 674 aa10.42□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Rlbp1Q9Z275 317 aa10.42□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Ylpm1Q9R0I7 1386 aaKnown RBP10.42□□□□□ -0.74
Cdc40-201ENSMUST00000044166 AnkarA2RT91 1465 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Gm20521D3Z5F7 333 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Cep170Q6A065 1588 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Nsd2Q8BVE8 1365 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Prdm16A2A935 1275 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Tbc1d32Q3URV1 1296 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 AknaQ80VW7 1404 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Gas2l2Q5SSG4 860 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Gtf2e1Q9D0D5 440 aa10.41□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Atl3Q91YH5 541 aa10.4□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Gm32742A0A1B0GT42 1604 aa10.4□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Antxr1Q9CZ52 562 aa10.4□□□□□ -0.74
Cdc40-201ENSMUST00000044166 Zcchc11B2RX14 1644 aaKnown RBP10.4□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Map4k4P97820 1233 aaKnown RBP10.4□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Myom2Q14BI5 1463 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Polr3glQ8R0C0 218 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Sh3bp5Q9Z131 463 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Kdm5aQ3UXZ9 1690 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Kiaa1107Q80TK0 1369 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Fam135bQ9DAI6 1403 aa10.39□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Dmrt2Q8BG36 561 aa10.38□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Cfap74Q3UY96 1578 aa10.38□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Gtpbp6Q3U6U5 514 aa10.38□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Robo2Q7TPD3 1470 aa10.38□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Itsn2Q9Z0R6 1659 aa10.38□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Mcm4P49717 862 aa10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 AI481877A2ALV5 1481 aa10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Neo1P97798 1493 aa10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Abcc6Q9R1S7 1498 aa10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Pdcd11Q6NS46 1862 aaKnown RBP10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Rnf17Q99MV7 1640 aa10.37□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Hecw1Q8K4P8 1604 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Usp40Q8BWR4 1235 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Gprasp1Q5U4C1 1347 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Speer4f2E9Q366 295 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Prdm10Q3UTQ7 1184 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Lrriq1Q0P5X1 1673 aa10.36□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Mfap1aC0HKD8 439 aaKnown RBP10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Mfap1bC0HKD9 439 aaKnown RBP10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Srpk2O54781 681 aaKnown RBP10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Atxn3Q9CVD2 355 aa10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Phlpp2Q8BXA7 1320 aa10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 GsdmaQ9EST1 446 aa10.35□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Map7O88735 730 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Ssh1Q76I79 1042 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Dnmt1P13864 1620 aaKnown RBP10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Kif1bQ60575 1816 aaKnown RBP10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Catsper2A2ARP9 588 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Ksr2Q3UVC0 959 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Sall3Q62255 1320 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Sh3bp1P55194 680 aa10.34□□□□□ -0.75
Cdc40-201ENSMUST00000044166 Ccar1Q8CH18 1146 aaKnown RBP10.33□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Map3k5O35099 1380 aa10.33□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Terf2O35144 541 aa10.33□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Fam13bQ8K2H3 851 aa10.33□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Cluap1Q8R3P7 413 aa10.33□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Plcb2A3KGF7 1181 aa10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Fan1Q69ZT1 1020 aa10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Fam114a1Q9D281 569 aa10.32□□□□□ -0.76
Cdc40-201ENSMUST00000044166 Uggt2E9Q4X2 1504 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms