RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ppp2r1aQ76MZ3 589 aa11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Jph4Q80WT0 628 aa11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Znhit6Q3UFB2 460 aaKnown RBP11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Pdcl3Q8BVF2 240 aa11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ccdc43Q9CR29 222 aaKnown RBP11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ttll5Q8CHB8 1328 aa11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Mphosph10Q810V0 681 aaKnown RBP11.85□□□□□ -0.51
Syne1-201ENSMUST00000041639 Pde4cQ3UEI1 686 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Cchcr1Q8K2I2 770 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 EzrP26040 586 aaKnown RBP11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ncbp3Q8BZR9 615 aaKnown RBP11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Atp2b2Q9R0K7 1198 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Me1P06801 572 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Gsdma3Q5Y4Y6 464 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Q9D9H8 365 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Cttnbp2B9EJA2 1648 aa11.84□□□□□ -0.51
Syne1-201ENSMUST00000041639 Ints3Q7TPD0 1041 aaKnown RBP11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Ubxn4Q8VCH8 506 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 NaspQ99MD9 773 aaKnown RBP11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Odf2A3KGV1 830 aaKnown RBP11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Gcom1E9PZ54 550 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 MyzapQ3UIJ9 466 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Nsd2Q8BVE8 1365 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Cux1P53564 1515 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Ppm1fQ8CGA0 452 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Cfap99A0A140LIX9 648 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Gtf2f1Q3THK3 508 aaKnown RBP11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Soga1E1U8D0 1418 aa11.83□□□□□ -0.52
Syne1-201ENSMUST00000041639 Fmnl2A2APV2 1086 aa11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 Smarca4Q3TKT4 1613 aaKnown RBP11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 Zkscan2G3X952 960 aa11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 March6Q6ZQ89 909 aa11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 NexnQ7TPW1 607 aa11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 Vps8Q0P5W1 1427 aa11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 Zrsr2Q62377 462 aaKnown RBP11.82□□□□□ -0.52
Syne1-201ENSMUST00000041639 Anp32eP97822 260 aaKnown RBP11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Psma5Q9Z2U1 241 aaKnown RBP11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Rufy1Q8BIJ7 712 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Ncoa2Q61026 1462 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Fam13bQ8K2H3 851 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Atad2bE9Q166 1460 aaKnown RBP11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Cavin4A2AMM0 362 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Kif3aP28741 701 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Fnbp4Q6ZQ03 1031 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 Ccdc171E9Q1U1 1324 aa11.81□□□□□ -0.52
Syne1-201ENSMUST00000041639 1700010I14RikQ7TPG0 532 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Mcm2P97310 904 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Rab3gap2Q8BMG7 1366 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Abl1P00520 1123 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 TatQ8QZR1 454 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Rbm10Q99KG3 930 aaKnown RBP11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Ift140E9PY46 1464 aa11.8□□□□□ -0.52
Syne1-201ENSMUST00000041639 Nap1l1P28656 391 aaKnown RBP11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 Cog6Q8R3I3 657 aa11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 FanciQ8K368 1330 aa11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 MpripP97434 1024 aa11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 Rbm28Q8CGC6 750 aaKnown RBP11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 Eva1cP58659 440 aa11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 Tmc1Q8R4P5 757 aa11.79□□□□□ -0.52
Syne1-201ENSMUST00000041639 Gm10471E9Q1C7 252 aa11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 Trim29Q8R2Q0 587 aa11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 Shroom4Q1W617 1475 aa11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 Zkscan1Q8BGS3 561 aaKnown RBP11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 AnlnQ8K298 1121 aaKnown RBP11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 PdcQ9QW08 244 aa11.78□□□□□ -0.52
Syne1-201ENSMUST00000041639 Necab1Q8BG18 352 aa11.77□□□□□ -0.52
Syne1-201ENSMUST00000041639 Znf704Q9ERQ3 566 aa11.77□□□□□ -0.52
Syne1-201ENSMUST00000041639 Mns1Q61884 491 aa11.77□□□□□ -0.53
Syne1-201ENSMUST00000041639 Chrna2Q91X60 512 aa11.77□□□□□ -0.53
Syne1-201ENSMUST00000041639 Gnai2P08752 355 aaKnown RBP11.77□□□□□ -0.53
Syne1-201ENSMUST00000041639 Hdgfl1Q2VPR5 283 aa11.77□□□□□ -0.53
Syne1-201ENSMUST00000041639 Jakmip1Q8BVL9 626 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Q9D9S1 216 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Fkbp4P30416 458 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Kif18aQ91WD7 886 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Nphp1Q9QY53 687 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Sytl4Q9R0Q1 673 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cd109Q8R422 1442 aa11.76□□□□□ -0.53
Syne1-201ENSMUST00000041639 Map3k5O35099 1380 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Dusp27Q148W8 1138 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Nol8Q3UHX0 1147 aaKnown RBP11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Prm3Q62100 101 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cnnm3Q32NY4 713 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cabp2Q9JLK4 216 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cc2d2aQ8CFW7 1633 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cdkn1cP49919 348 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Sycp1Q62209 993 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 Washc2Q6PGL7 1334 aa11.75□□□□□ -0.53
Syne1-201ENSMUST00000041639 HmmrQ00547 794 aaKnown RBP11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Agtpbp1Q641K1 1218 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Olfml1Q8BSH2 233 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 HypkQ9CR41 129 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Naip1Q9QWK5 1403 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Cwc27Q3TKY6 469 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Rsph6aQ8CDR2 708 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 UvssaQ9D479 717 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Zranb3Q6NZP1 1069 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Ssh1Q76I79 1042 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Gcc1Q9D4H2 778 aa11.74□□□□□ -0.53
Syne1-201ENSMUST00000041639 Prdm16A2A935 1275 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms