RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Zranb1Q7M760 708 aa29.62■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 Sipa1l2Q80TE4 1722 aa29.62■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 GnpatP98192 678 aa29.61■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 Stk26Q99JT2 416 aa29.61■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 Slc52a2Q9D8F3 450 aa29.61■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 Q3UJC8 639 aa29.6■■■□□ 2.33
Ttc39b-201ENSMUST00000030205 Wnk3Q80XP9 1757 aa29.57■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Abcc10Q8R4P9 1501 aa29.56■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Tulp4Q9JIL5 1547 aa29.56■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Kcna6Q61923 529 aa29.56■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Farp2Q91VS8 1065 aa29.55■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 D430041D05RikF6ZGR6 1678 aa29.54■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Usp32F8VPZ3 1604 aa29.53■■■□□ 2.32
Ttc39b-201ENSMUST00000030205 Rock1P70335 1354 aa29.51■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Marf1Q8BJ34 1730 aaKnown RBP29.5■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 N4bp2F8VQG7 1678 aaKnown RBP29.49■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Ccer2J3QPU5 274 aa29.48■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Cep170bQ80U49 1574 aa29.47■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Adamts13Q769J6 1426 aa29.47■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Kdm2aP59997 1161 aa29.47■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Smim5Q8BT42 78 aa29.47■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Fan1Q69ZT1 1020 aa29.46■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Emilin2Q8K482 1074 aa29.46■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 Srpk2O54781 681 aaKnown RBP29.45■■■□□ 2.31
Ttc39b-201ENSMUST00000030205 C5P06684 1680 aa29.44■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Als2Q920R0 1651 aa29.41■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Puf60Q3UEB3 564 aaKnown RBP29.41■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Os9Q8K2C7 672 aa29.41■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Tex14Q7M6U3 1450 aa29.41■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Ifit1bl1D3Z6F0 470 aa29.4■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 MpndQ3TV65 487 aa29.4■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Lrrc7Q80TE7 1490 aa29.4■■■□□ 2.3
Ttc39b-201ENSMUST00000030205 Camta1A2A891 1682 aa29.38■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Tmem2Q5FWI3 1383 aa29.38■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Cep152A2AUM9 1736 aaKnown RBP29.37■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Plekhg1F6S200 1446 aa29.37■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Rgs17Q9QZB0 210 aa29.36■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Kif1aP33173 1695 aa29.35■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Idi1P58044 227 aa29.35■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Arhgef1Q61210 920 aaKnown RBP29.35■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Fam135bQ9DAI6 1403 aa29.35■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Rgl3Q3UYI5 709 aa29.34■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Cdk5rap2Q8K389 1822 aa29.34■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Sox12Q04890 314 aa29.33■■■□□ 2.29
Ttc39b-201ENSMUST00000030205 Ehmt2Q9Z148 1263 aaKnown RBP29.32■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Gm20521D3Z5F7 333 aa29.31■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Ddx54Q8K4L0 874 aaKnown RBP29.31■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Atp7bQ64446 1462 aa29.3■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Acsbg1Q99PU5 721 aa29.29■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Eno4Q8C042 619 aa29.28■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Lrrc59Q922Q8 307 aaKnown RBP29.28■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Ildr2B5TVM2 661 aa29.27■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Usp47Q8BY87 1376 aa29.26■■■□□ 2.28
Ttc39b-201ENSMUST00000030205 Atp10bB1AWN4 1474 aa29.25■■■□□ 2.27
Ttc39b-201ENSMUST00000030205 Atp2b2Q9R0K7 1198 aa29.23■■■□□ 2.27
Ttc39b-201ENSMUST00000030205 Abca14E9Q8F8 1683 aa29.23■■■□□ 2.27
Ttc39b-201ENSMUST00000030205 InhbeO08717 350 aa29.21■■■□□ 2.27
Ttc39b-201ENSMUST00000030205 Cadps2Q8BYR5 1297 aa29.2■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Col22a1E9Q7P1 1613 aa29.19■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Wdr17E9Q271 1322 aa29.19■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 IqubQ8CDK3 788 aa29.18■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 NgefQ8CHT1 710 aa29.18■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Mink1Q9JM52 1308 aa29.18■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 PtpruB1AUH1 1446 aa29.17■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Acin1Q9JIX8 1338 aaKnown RBP29.17■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Grwd1Q810D6 446 aaKnown RBP29.16■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Sipa1l1Q8C0T5 1782 aa29.16■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Ap3b2Q9JME5 1082 aa29.15■■■□□ 2.26
Ttc39b-201ENSMUST00000030205 Stag3O70576 1240 aa29.13■■■□□ 2.25
Ttc39b-201ENSMUST00000030205 Sirt1Q923E4 737 aa29.12■■■□□ 2.25
Ttc39b-201ENSMUST00000030205 Psrc1Q9D0P7 329 aa29.1■■■□□ 2.25
Ttc39b-201ENSMUST00000030205 Abca15E9PWH4 1668 aa29.09■■■□□ 2.25
Ttc39b-201ENSMUST00000030205 Usp40Q8BWR4 1235 aa29.07■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Dixdc1Q80Y83 711 aa29.06■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 RalgapbQ8BQZ4 1484 aa29.05■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Polr3aB2RXC6 1390 aa29.05■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Eid3Q3V124 375 aa29.05■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Znf316Q6PGE4 1016 aa29.04■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Sgsm1Q8BPQ7 1093 aa29.03■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Slc35g1Q8BY79 368 aa29.03■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Cpsf1Q9EPU4 1441 aaKnown RBP29.03■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Nrxn1Q9CS84 1514 aa29.02■■■□□ 2.24
Ttc39b-201ENSMUST00000030205 Cdhr2E9Q7P9 1308 aa29■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Tnrc6cQ3UHC0 1690 aaKnown RBP29■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Fyb1O35601 819 aa28.98■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Shank2Q80Z38 1476 aa28.97■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Kdm2bQ6P1G2 1309 aa28.96■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Cdk19Q8BWD8 501 aa28.96■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Mon2Q80TL7 1715 aa28.96■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Tnrc6bQ8BKI2 1810 aaKnown RBP28.96■■■□□ 2.23
Ttc39b-201ENSMUST00000030205 Col16a1Q8BLX7 1580 aa28.95■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 NktrP30415 1453 aa28.94■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Ccdc6D3YZP9 469 aa28.94■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Hspa5P20029 655 aaKnown RBP28.94■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Nfat5Q9WV30 1534 aa28.94■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Gm16486A0A1D5RMD1 1434 aa28.94■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Sf3b2Q3UJB0 878 aaKnown RBP28.93■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Txnrd1Q9JMH6 613 aa28.93■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Nphp4P59240 1425 aa28.93■■■□□ 2.22
Ttc39b-201ENSMUST00000030205 Ltbp1Q8CG19 1712 aa28.91■■■□□ 2.22
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms