RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Kdm5aQ3UXZ9 1690 aa29.57■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Q9D9H8 365 aa29.57■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Upf2A2AT37 1269 aaKnown RBP29.56■■■□□ 2.32
Ptx3-201ENSMUST00000029421 P3h3Q8CG70 732 aa29.56■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Chd2E9PZM4 1827 aaKnown RBP29.55■■■□□ 2.32
Ptx3-201ENSMUST00000029421 CenpjQ569L8 1344 aa29.54■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Mink1Q9JM52 1308 aa29.54■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Eif2ak4Q9QZ05 1648 aa29.54■■■□□ 2.32
Ptx3-201ENSMUST00000029421 PplQ9R269 1755 aa29.54■■■□□ 2.32
Ptx3-201ENSMUST00000029421 InsrP15208 1372 aa29.53■■■□□ 2.32
Ptx3-201ENSMUST00000029421 Rpgrip1lQ8CG73 1264 aa29.51■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Cep170bQ80U49 1574 aa29.5■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Gemin5Q8BX17 1502 aaKnown RBP29.48■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Txndc2Q6P902 515 aa29.47■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Psme1P97371 249 aa29.46■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Kank1E9Q238 1360 aa29.45■■■□□ 2.31
Ptx3-201ENSMUST00000029421 Dip2aQ8BWT5 1523 aa29.45■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Dip2bQ3UH60 1574 aa29.45■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Utp14aQ640M1 767 aaKnown RBP29.44■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Liat1Q810M6 228 aa29.44■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Tcerg1Q8CGF7 1100 aaKnown RBP29.44■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Plekhg1F6S200 1446 aa29.44■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Cnga1P29974 684 aa29.43■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Q7TT23 1179 aa29.42■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Tex14Q7M6U3 1450 aa29.41■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Asxl2Q8BZ32 1370 aa29.41■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Ppp2r1aQ76MZ3 589 aa29.39■■■□□ 2.3
Ptx3-201ENSMUST00000029421 Gprasp1Q5U4C1 1347 aa29.38■■■□□ 2.29
Ptx3-201ENSMUST00000029421 DiexfQ8BTT6 772 aaKnown RBP29.38■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Kif7B7ZNG0 1348 aa29.37■■■□□ 2.29
Ptx3-201ENSMUST00000029421 L3mbtl2P59178 703 aa29.37■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Zscan21Q07231 555 aa29.37■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Dcaf11Q91VU6 549 aa29.37■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Rab3gap2Q8BMG7 1366 aa29.35■■■□□ 2.29
Ptx3-201ENSMUST00000029421 IghaA0A0A6YXW6 389 aa29.35■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Abca14E9Q8F8 1683 aa29.34■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Bcl11aQ9QYE3 773 aa29.34■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Atp2b2Q9R0K7 1198 aa29.34■■■□□ 2.29
Ptx3-201ENSMUST00000029421 Slit3Q9WVB4 1523 aa29.31■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Mak16Q8BGS0 296 aaKnown RBP29.31■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Exosc9Q9JHI7 438 aaKnown RBP29.3■■■□□ 2.28
Ptx3-201ENSMUST00000029421 4930407I10RikD3Z5T8 1512 aa29.29■■■□□ 2.28
Ptx3-201ENSMUST00000029421 NktrP30415 1453 aa29.27■■■□□ 2.28
Ptx3-201ENSMUST00000029421 TnikP83510 1323 aa29.27■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Gsto1O09131 240 aa29.27■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Cdk19Q8BWD8 501 aa29.27■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Bcl9Q9D219 1425 aa29.27■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Nwd1A6H603 1563 aa29.26■■■□□ 2.28
Ptx3-201ENSMUST00000029421 Ipo9Q91YE6 1041 aa29.26■■■□□ 2.27
Ptx3-201ENSMUST00000029421 KdrP35918 1367 aa29.25■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Zranb1Q7M760 708 aa29.25■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Pak3Q61036 559 aa29.24■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Nrxn1Q9CS84 1514 aa29.23■■■□□ 2.27
Ptx3-201ENSMUST00000029421 NeflP08551 543 aa29.23■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Prdm10Q3UTQ7 1184 aa29.22■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Egfem1Q8C088 590 aa29.22■■■□□ 2.27
Ptx3-201ENSMUST00000029421 PzpQ61838 1495 aa29.21■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Atf7ipQ7TT18 1306 aa29.21■■■□□ 2.27
Ptx3-201ENSMUST00000029421 Prkrip1Q9CWV6 186 aaKnown RBP29.2■■■□□ 2.26
Ptx3-201ENSMUST00000029421 MyclP10166 368 aa29.19■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Mbd3Q9Z2D8 285 aaKnown RBP29.19■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Ccdc27Q3V036 639 aa29.19■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Cps1Q8C196 1500 aa29.18■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Ttc41Q692V3 1318 aa29.18■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Pik3r4Q8VD65 1358 aa29.16■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Zfp444Q3TDV8 331 aaKnown RBP29.14■■■□□ 2.26
Ptx3-201ENSMUST00000029421 FanciQ8K368 1330 aa29.14■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Alpk3Q924C5 1678 aa29.14■■■□□ 2.26
Ptx3-201ENSMUST00000029421 GphnQ8BUV3 769 aaKnown RBP29.14■■■□□ 2.26
Ptx3-201ENSMUST00000029421 Adgrl1Q80TR1 1466 aa29.14■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Arap3Q8R5G7 1538 aa29.13■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Nlrp6Q91WS2 869 aa29.12■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Scaf11E9PZM7 1456 aaKnown RBP29.12■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Erbb3Q61526 1339 aa29.12■■■□□ 2.25
Ptx3-201ENSMUST00000029421 HnrnpmQ9D0E1 729 aaKnown RBP29.11■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Ccdc9Q8VC31 543 aaKnown RBP29.1■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Lmtk3Q5XJV6 1424 aa29.09■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Usp32F8VPZ3 1604 aa29.09■■■□□ 2.25
Ptx3-201ENSMUST00000029421 Esx1O88933 382 aa29.08■■■□□ 2.25
Ptx3-201ENSMUST00000029421 MlecQ6ZQI3 291 aaKnown RBP29.07■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Cald1E9QA15 768 aaKnown RBP29.06■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Topaz1E5FYH1 1653 aa29.05■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Map3k19E9Q3S4 1311 aa29.05■■■□□ 2.24
Ptx3-201ENSMUST00000029421 NinlQ6ZQ12 1394 aa29.04■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Slc4a3P16283 1227 aa29.02■■■□□ 2.24
Ptx3-201ENSMUST00000029421 IbtkQ6ZPR6 1352 aaKnown RBP29.02■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Pik3c2bE9QAN8 1632 aa29.01■■■□□ 2.24
Ptx3-201ENSMUST00000029421 Zmym3Q9JLM4 1370 aa29.01■■■□□ 2.23
Ptx3-201ENSMUST00000029421 Kiaa1107Q80TK0 1369 aa28.99■■■□□ 2.23
Ptx3-201ENSMUST00000029421 Idi2Q8BFZ6 227 aa28.98■■■□□ 2.23
Ptx3-201ENSMUST00000029421 P2rx7Q9Z1M0 595 aa28.98■■■□□ 2.23
Ptx3-201ENSMUST00000029421 PtpruB1AUH1 1446 aa28.96■■■□□ 2.23
Ptx3-201ENSMUST00000029421 Q3UJC8 639 aa28.95■■■□□ 2.23
Ptx3-201ENSMUST00000029421 Kcnh8P59111 1102 aa28.95■■■□□ 2.22
Ptx3-201ENSMUST00000029421 Sirt1Q923E4 737 aa28.95■■■□□ 2.22
Ptx3-201ENSMUST00000029421 Rreb1Q3UH06 1700 aaKnown RBP28.95■■■□□ 2.22
Ptx3-201ENSMUST00000029421 Znf316Q6PGE4 1016 aa28.93■■■□□ 2.22
Ptx3-201ENSMUST00000029421 Tnrc6bQ8BKI2 1810 aaKnown RBP28.93■■■□□ 2.22
Ptx3-201ENSMUST00000029421 Rad21Q61550 635 aaKnown RBP28.92■■■□□ 2.22
Ptx3-201ENSMUST00000029421 GsdmaQ9EST1 446 aa28.89■■■□□ 2.22
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms