RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Slc20a2Q80UP8 656 aa14.32□□□□□ -0.12
Trim55-201ENSMUST00000029139 Tnpo1Q8BFY9 898 aaKnown RBP14.31□□□□□ -0.12
Trim55-201ENSMUST00000029139 NhsB1AV60 1647 aa14.31□□□□□ -0.12
Trim55-201ENSMUST00000029139 Kiaa1210E9Q0C6 1637 aa14.31□□□□□ -0.12
Trim55-201ENSMUST00000029139 Anapc15-psA0A140T8L6 141 aa14.3□□□□□ -0.12
Trim55-201ENSMUST00000029139 Znf771Q8BJ90 317 aa14.3□□□□□ -0.12
Trim55-201ENSMUST00000029139 Abca8bQ8K440 1620 aa14.3□□□□□ -0.12
Trim55-201ENSMUST00000029139 Rabep1O35551 862 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Talpid3E9PV87 1520 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Dmrt2Q8BG36 561 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Nfatc2ipO09130 412 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Gabpb2P81069 414 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Mindy4Q3UQI9 744 aa14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Fam50aQ9WV03 339 aaKnown RBP14.29□□□□□ -0.12
Trim55-201ENSMUST00000029139 Pank2Q3U4S0 443 aa14.28□□□□□ -0.12
Trim55-201ENSMUST00000029139 Tshz1Q5DTH5 1084 aa14.27□□□□□ -0.13
Trim55-201ENSMUST00000029139 Mak16Q8BGS0 296 aaKnown RBP14.27□□□□□ -0.13
Trim55-201ENSMUST00000029139 Synj2Q9D2G5 1434 aa14.27□□□□□ -0.13
Trim55-201ENSMUST00000029139 WizO88286 1684 aaKnown RBP14.27□□□□□ -0.13
Trim55-201ENSMUST00000029139 Jph4Q80WT0 628 aa14.26□□□□□ -0.13
Trim55-201ENSMUST00000029139 Glipr1l2Q9CQ35 332 aa14.26□□□□□ -0.13
Trim55-201ENSMUST00000029139 U2af2P26369 475 aaKnown RBP14.25□□□□□ -0.13
Trim55-201ENSMUST00000029139 Kif24Q6NWW5 1356 aa14.25□□□□□ -0.13
Trim55-201ENSMUST00000029139 Rock2P70336 1388 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Dip2aQ8BWT5 1523 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Catsper2A2ARP9 588 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Cdkn1cP49919 348 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Zfp444Q3TDV8 331 aaKnown RBP14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 OvosQ3UU35 1456 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 GscQ02591 256 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Irx5Q9JKQ4 484 aa14.24□□□□□ -0.13
Trim55-201ENSMUST00000029139 Supt6hQ62383 1726 aaKnown RBP14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Mfap1aC0HKD8 439 aaKnown RBP14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Mfap1bC0HKD9 439 aaKnown RBP14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Plekhg5Q66T02 1073 aa14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Q7TT23 1179 aa14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 AatfQ9JKX4 526 aaKnown RBP14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Prr29B1ARI9 187 aa14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 Tmx4Q8C0L0 335 aa14.23□□□□□ -0.13
Trim55-201ENSMUST00000029139 PxdnQ3UQ28 1475 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Scn4aQ9ER60 1841 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 PtmaP26350 111 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Cul7Q8VE73 1689 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Ncbp1Q3UYV9 790 aaKnown RBP14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Chaf1aQ9QWF0 911 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Irx4Q9QY61 515 aa14.22□□□□□ -0.13
Trim55-201ENSMUST00000029139 Ddit3P35639 168 aa14.21□□□□□ -0.13
Trim55-201ENSMUST00000029139 Kif7B7ZNG0 1348 aa14.21□□□□□ -0.13
Trim55-201ENSMUST00000029139 Zmym4A2A791 1549 aaKnown RBP14.21□□□□□ -0.14
Trim55-201ENSMUST00000029139 Irf6P97431 467 aa14.21□□□□□ -0.14
Trim55-201ENSMUST00000029139 Mtus2Q3UHD3 1353 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 NinlQ6ZQ12 1394 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 Abca5Q8K448 1642 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 Prex2Q3LAC4 1598 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 Irx2P81066 474 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 Znf608Q56A10 1511 aa14.2□□□□□ -0.14
Trim55-201ENSMUST00000029139 Terf2O35144 541 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Nectin2P32507 530 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Inpp5bQ8K337 993 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Qser1A2BIE1 1698 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Hsp90b1P08113 802 aaKnown RBP14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Ctr9Q62018 1173 aaKnown RBP14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Tbc1d31Q6NXY1 996 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Tmx3Q8BXZ1 456 aa14.19□□□□□ -0.14
Trim55-201ENSMUST00000029139 Iqca1Q9CUL5 857 aa14.18□□□□□ -0.14
Trim55-201ENSMUST00000029139 Ttc41Q692V3 1318 aa14.18□□□□□ -0.14
Trim55-201ENSMUST00000029139 Rad21Q61550 635 aaKnown RBP14.18□□□□□ -0.14
Trim55-201ENSMUST00000029139 Morc2aQ69ZX6 1030 aa14.18□□□□□ -0.14
Trim55-201ENSMUST00000029139 Arhgef40Q3UPH7 1517 aa14.17□□□□□ -0.14
Trim55-201ENSMUST00000029139 AdnpQ9Z103 1108 aaKnown RBP14.17□□□□□ -0.14
Trim55-201ENSMUST00000029139 Ptgs1P22437 602 aa14.17□□□□□ -0.14
Trim55-201ENSMUST00000029139 Rsph3aQ3UFY4 516 aa14.17□□□□□ -0.14
Trim55-201ENSMUST00000029139 Ccdc34Q3UI66 367 aa14.17□□□□□ -0.14
Trim55-201ENSMUST00000029139 Lrriq3Q14DL3 633 aa14.16□□□□□ -0.14
Trim55-201ENSMUST00000029139 Sass6Q80UK7 654 aa14.16□□□□□ -0.14
Trim55-201ENSMUST00000029139 Pwp2Q8BU03 919 aaKnown RBP14.16□□□□□ -0.14
Trim55-201ENSMUST00000029139 Swt1Q9DBQ9 907 aa14.16□□□□□ -0.14
Trim55-201ENSMUST00000029139 Tbc1d32Q3URV1 1296 aa14.16□□□□□ -0.14
Trim55-201ENSMUST00000029139 Arap1Q4LDD4 1452 aa14.15□□□□□ -0.14
Trim55-201ENSMUST00000029139 Ercc3P49135 783 aa14.15□□□□□ -0.14
Trim55-201ENSMUST00000029139 Kiaa0754Q69ZZ9 979 aa14.15□□□□□ -0.14
Trim55-201ENSMUST00000029139 Arglu1Q3UL36 271 aaKnown RBP14.15□□□□□ -0.14
Trim55-201ENSMUST00000029139 MycbpQ9EQS3 103 aa14.14□□□□□ -0.15
Trim55-201ENSMUST00000029139 Gm973E9Q295 1059 aa14.14□□□□□ -0.15
Trim55-201ENSMUST00000029139 Phf20l1Q8CCJ9 1013 aa14.14□□□□□ -0.15
Trim55-201ENSMUST00000029139 Sf3a1Q8K4Z5 791 aaKnown RBP14.14□□□□□ -0.15
Trim55-201ENSMUST00000029139 Rbm42Q91V81 474 aaKnown RBP14.14□□□□□ -0.15
Trim55-201ENSMUST00000029139 A2mQ6GQT1 1474 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Zbtb38Q3LR78 1197 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Igsf3Q6ZQA6 1194 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Kif21bQ9QXL1 1668 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Setd5Q5XJV7 1441 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Zfp597E9Q6S0 419 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Adam1bQ8R534 806 aa14.13□□□□□ -0.15
Trim55-201ENSMUST00000029139 Anp32cQ64G17 123 aa14.12□□□□□ -0.15
Trim55-201ENSMUST00000029139 Dcaf11Q91VU6 549 aa14.12□□□□□ -0.15
Trim55-201ENSMUST00000029139 Peg3Q3URU2 1571 aa14.12□□□□□ -0.15
Trim55-201ENSMUST00000029139 C1qtnf12Q8R2Z0 308 aa14.12□□□□□ -0.15
Trim55-201ENSMUST00000029139 Ess2O70279 479 aa14.11□□□□□ -0.15
Trim55-201ENSMUST00000029139 Rassf4Q8CB96 322 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms