RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Lrriq1Q0P5X1 1673 aa22.36■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Map7O88735 730 aa22.35■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Tpm2P58774 284 aa22.34■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Fkbp15Q6P9Q6 1216 aaKnown RBP22.34■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Trim26Q99PN3 545 aa22.34■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Pde4cQ3UEI1 686 aa22.34■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Os9Q8K2C7 672 aa22.34■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Spag9Q58A65 1321 aaKnown RBP22.33■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Robo2Q7TPD3 1470 aa22.33■■□□□ 1.17
Sqstm1-201ENSMUST00000015981 Ksr2Q3UVC0 959 aa22.33■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Zcchc11B2RX14 1644 aaKnown RBP22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Neurl4Q5NCX5 1563 aa22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Nsfl1cQ9CZ44 370 aaKnown RBP22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Arhgap5P97393 1501 aa22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Rsph3aQ3UFY4 516 aa22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Gm32742A0A1B0GT42 1604 aa22.32■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Gprasp1Q5U4C1 1347 aa22.31■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Prdm10Q3UTQ7 1184 aa22.31■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Gtf2e1Q9D0D5 440 aa22.31■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Fancd2Q80V62 1450 aa22.31■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Erich6D3Z6S9 713 aa22.31■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Gm20521D3Z5F7 333 aa22.3■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Dusp27Q148W8 1138 aa22.3■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 AknaQ80VW7 1404 aa22.3■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Iqsec2Q5DU25 1478 aa22.3■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Abcc6Q9R1S7 1498 aa22.3■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Rfx1P48377 963 aa22.29■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Hs1bp3Q3TC93 395 aa22.29■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Rusc2Q80U22 1514 aa22.29■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 GsdmaQ9EST1 446 aa22.28■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Ppp1r3fQ9JIG4 799 aa22.28■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 DekQ7TNV0 380 aaKnown RBP22.28■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Rbm25B2RY56 838 aaKnown RBP22.27■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 AU019823E9PUQ3 292 aa22.27■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Kif18aQ91WD7 886 aa22.27■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Ccar1Q8CH18 1146 aaKnown RBP22.27■■□□□ 1.16
Sqstm1-201ENSMUST00000015981 Dhx16G3X8X0 1044 aaKnown RBP22.26■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Nsd2Q8BVE8 1365 aa22.26■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Hecw1Q8K4P8 1604 aa22.26■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Myom1Q62234 1667 aaKnown RBP22.25■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Sall3Q62255 1320 aa22.25■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Gm10093D3YYI8 482 aa22.24■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Hdac1O09106 482 aaKnown RBP22.24■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 IbtkQ6ZPR6 1352 aaKnown RBP22.24■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Usp40Q8BWR4 1235 aa22.23■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Stard8Q8K031 1019 aa22.23■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Cog6Q8R3I3 657 aa22.23■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 P2rx7Q9Z1M0 595 aa22.22■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Jph4Q80WT0 628 aa22.22■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 AI481877A2ALV5 1481 aa22.22■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Uggt2E9Q4X2 1504 aa22.21■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Apaf1O88879 1249 aa22.21■■□□□ 1.15
Sqstm1-201ENSMUST00000015981 Prdm16A2A935 1275 aa22.2■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Rbm10Q99KG3 930 aaKnown RBP22.2■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Pdia4P08003 638 aaKnown RBP22.19■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 KnstrnQ9D9Z1 312 aaKnown RBP22.19■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Ncapd2Q8K2Z4 1392 aa22.19■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Cnga1P29974 684 aa22.19■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Ripk4Q9ERK0 786 aa22.19■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 VgfQ0VGU4 617 aa22.18■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Nom1Q3UFM5 854 aaKnown RBP22.18■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 SkilQ60665 675 aa22.18■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Rnf17Q99MV7 1640 aa22.18■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Abcc1O35379 1528 aa22.17■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Irf5P56477 497 aa22.17■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Fan1Q69ZT1 1020 aa22.16■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Pdcd11Q6NS46 1862 aaKnown RBP22.16■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Srpk2O54781 681 aaKnown RBP22.15■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Erbb4Q61527 1308 aa22.15■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 KdrP35918 1367 aa22.15■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Brd1E9PZ26 1189 aaKnown RBP22.14■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Nphp4P59240 1425 aa22.14■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Scaf11E9PZM7 1456 aaKnown RBP22.14■■□□□ 1.14
Sqstm1-201ENSMUST00000015981 Tmx3Q8BXZ1 456 aa22.14■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Cep152A2AUM9 1736 aaKnown RBP22.14■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Znf608Q56A10 1511 aa22.14■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Kif1bQ60575 1816 aaKnown RBP22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Neo1P97798 1493 aa22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Talpid3E9PV87 1520 aa22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Cald1E9QA15 768 aaKnown RBP22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Kdm4cQ8VCD7 1054 aa22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Erich6bQ9D4S6 220 aa22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 U2af1Q9D883 239 aaKnown RBP22.13■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Pdcl2Q78Y63 240 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Maco1Q7TQE6 664 aaKnown RBP22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Cdc42bpbQ7TT50 1713 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 ShprhQ7TPQ3 1674 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Map3k5O35099 1380 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Vsig10D3YX43 558 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Gse1Q3U3C9 1213 aa22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Ncbp3Q8BZR9 615 aaKnown RBP22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Tfip11Q9ERA6 838 aaKnown RBP22.12■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Usp54Q8BL06 1588 aaKnown RBP22.11■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Znf330Q922H9 316 aa22.11■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Dmrtc1Q9D9R7 182 aa22.1■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Ush1cQ9ES64 910 aa22.1■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Adgrl3Q80TS3 1537 aa22.1■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Zfyve16Q80U44 1528 aa22.1■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Tsen2Q6P7W5 460 aa22.09■■□□□ 1.13
Sqstm1-201ENSMUST00000015981 Dnmt1P13864 1620 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms