RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ddx17Q501J6 650 aaKnown RBP24.9■■□□□ 1.58
Trim54-201ENSMUST00000013771 Utp14aQ640M1 767 aaKnown RBP24.9■■□□□ 1.58
Trim54-201ENSMUST00000013771 Stk26Q99JT2 416 aa24.89■■□□□ 1.58
Trim54-201ENSMUST00000013771 Rims1Q99NE5 1463 aa24.88■■□□□ 1.57
Trim54-201ENSMUST00000013771 Q3UJC8 639 aa24.87■■□□□ 1.57
Trim54-201ENSMUST00000013771 Washc2Q6PGL7 1334 aa24.86■■□□□ 1.57
Trim54-201ENSMUST00000013771 Slc52a2Q9D8F3 450 aa24.86■■□□□ 1.57
Trim54-201ENSMUST00000013771 Farp2Q91VS8 1065 aa24.86■■□□□ 1.57
Trim54-201ENSMUST00000013771 Sipa1l2Q80TE4 1722 aa24.85■■□□□ 1.57
Trim54-201ENSMUST00000013771 Abcc10Q8R4P9 1501 aa24.85■■□□□ 1.57
Trim54-201ENSMUST00000013771 Kcna6Q61923 529 aa24.85■■□□□ 1.57
Trim54-201ENSMUST00000013771 Wnk3Q80XP9 1757 aa24.83■■□□□ 1.57
Trim54-201ENSMUST00000013771 D430041D05RikF6ZGR6 1678 aa24.82■■□□□ 1.56
Trim54-201ENSMUST00000013771 Emilin2Q8K482 1074 aa24.8■■□□□ 1.56
Trim54-201ENSMUST00000013771 Marf1Q8BJ34 1730 aaKnown RBP24.79■■□□□ 1.56
Trim54-201ENSMUST00000013771 Tulp4Q9JIL5 1547 aa24.79■■□□□ 1.56
Trim54-201ENSMUST00000013771 N4bp2F8VQG7 1678 aaKnown RBP24.78■■□□□ 1.56
Trim54-201ENSMUST00000013771 Kdm2aP59997 1161 aa24.78■■□□□ 1.56
Trim54-201ENSMUST00000013771 Os9Q8K2C7 672 aa24.78■■□□□ 1.56
Trim54-201ENSMUST00000013771 Usp32F8VPZ3 1604 aa24.77■■□□□ 1.56
Trim54-201ENSMUST00000013771 Srpk2O54781 681 aaKnown RBP24.77■■□□□ 1.56
Trim54-201ENSMUST00000013771 Ccer2J3QPU5 274 aa24.76■■□□□ 1.55
Trim54-201ENSMUST00000013771 MpndQ3TV65 487 aa24.75■■□□□ 1.55
Trim54-201ENSMUST00000013771 Fan1Q69ZT1 1020 aa24.75■■□□□ 1.55
Trim54-201ENSMUST00000013771 Smim5Q8BT42 78 aa24.75■■□□□ 1.55
Trim54-201ENSMUST00000013771 Rock1P70335 1354 aa24.74■■□□□ 1.55
Trim54-201ENSMUST00000013771 C5P06684 1680 aa24.72■■□□□ 1.55
Trim54-201ENSMUST00000013771 Cep170bQ80U49 1574 aa24.72■■□□□ 1.55
Trim54-201ENSMUST00000013771 Tex14Q7M6U3 1450 aa24.72■■□□□ 1.55
Trim54-201ENSMUST00000013771 Ifit1bl1D3Z6F0 470 aa24.69■■□□□ 1.54
Trim54-201ENSMUST00000013771 Lrrc7Q80TE7 1490 aa24.69■■□□□ 1.54
Trim54-201ENSMUST00000013771 Puf60Q3UEB3 564 aaKnown RBP24.69■■□□□ 1.54
Trim54-201ENSMUST00000013771 Als2Q920R0 1651 aa24.68■■□□□ 1.54
Trim54-201ENSMUST00000013771 Sox12Q04890 314 aa24.68■■□□□ 1.54
Trim54-201ENSMUST00000013771 Arhgef1Q61210 920 aaKnown RBP24.68■■□□□ 1.54
Trim54-201ENSMUST00000013771 Ddx54Q8K4L0 874 aaKnown RBP24.68■■□□□ 1.54
Trim54-201ENSMUST00000013771 Kif1aP33173 1695 aa24.68■■□□□ 1.54
Trim54-201ENSMUST00000013771 Tmem2Q5FWI3 1383 aa24.67■■□□□ 1.54
Trim54-201ENSMUST00000013771 Adamts13Q769J6 1426 aa24.67■■□□□ 1.54
Trim54-201ENSMUST00000013771 Fam135bQ9DAI6 1403 aa24.67■■□□□ 1.54
Trim54-201ENSMUST00000013771 Cep152A2AUM9 1736 aaKnown RBP24.66■■□□□ 1.54
Trim54-201ENSMUST00000013771 Ehmt2Q9Z148 1263 aaKnown RBP24.66■■□□□ 1.54
Trim54-201ENSMUST00000013771 Plekhg1F6S200 1446 aa24.65■■□□□ 1.54
Trim54-201ENSMUST00000013771 Rgl3Q3UYI5 709 aa24.64■■□□□ 1.54
Trim54-201ENSMUST00000013771 Atp7bQ64446 1462 aa24.64■■□□□ 1.54
Trim54-201ENSMUST00000013771 Acsbg1Q99PU5 721 aa24.64■■□□□ 1.54
Trim54-201ENSMUST00000013771 Rgs17Q9QZB0 210 aa24.64■■□□□ 1.54
Trim54-201ENSMUST00000013771 Camta1A2A891 1682 aa24.63■■□□□ 1.53
Trim54-201ENSMUST00000013771 Gm20521D3Z5F7 333 aa24.63■■□□□ 1.53
Trim54-201ENSMUST00000013771 Idi1P58044 227 aa24.62■■□□□ 1.53
Trim54-201ENSMUST00000013771 Lrrc59Q922Q8 307 aaKnown RBP24.62■■□□□ 1.53
Trim54-201ENSMUST00000013771 Eno4Q8C042 619 aa24.61■■□□□ 1.53
Trim54-201ENSMUST00000013771 Cdk5rap2Q8K389 1822 aa24.61■■□□□ 1.53
Trim54-201ENSMUST00000013771 Ildr2B5TVM2 661 aa24.6■■□□□ 1.53
Trim54-201ENSMUST00000013771 Atp10bB1AWN4 1474 aa24.58■■□□□ 1.53
Trim54-201ENSMUST00000013771 NgefQ8CHT1 710 aa24.57■■□□□ 1.52
Trim54-201ENSMUST00000013771 InhbeO08717 350 aa24.56■■□□□ 1.52
Trim54-201ENSMUST00000013771 Cadps2Q8BYR5 1297 aa24.56■■□□□ 1.52
Trim54-201ENSMUST00000013771 Atp2b2Q9R0K7 1198 aa24.56■■□□□ 1.52
Trim54-201ENSMUST00000013771 Usp47Q8BY87 1376 aa24.56■■□□□ 1.52
Trim54-201ENSMUST00000013771 IqubQ8CDK3 788 aa24.55■■□□□ 1.52
Trim54-201ENSMUST00000013771 Ap3b2Q9JME5 1082 aa24.54■■□□□ 1.52
Trim54-201ENSMUST00000013771 Abca14E9Q8F8 1683 aa24.53■■□□□ 1.52
Trim54-201ENSMUST00000013771 Sirt1Q923E4 737 aa24.52■■□□□ 1.52
Trim54-201ENSMUST00000013771 Col22a1E9Q7P1 1613 aa24.52■■□□□ 1.52
Trim54-201ENSMUST00000013771 Wdr17E9Q271 1322 aa24.51■■□□□ 1.51
Trim54-201ENSMUST00000013771 Mink1Q9JM52 1308 aa24.51■■□□□ 1.51
Trim54-201ENSMUST00000013771 Stag3O70576 1240 aa24.5■■□□□ 1.51
Trim54-201ENSMUST00000013771 Grwd1Q810D6 446 aaKnown RBP24.49■■□□□ 1.51
Trim54-201ENSMUST00000013771 PtpruB1AUH1 1446 aa24.47■■□□□ 1.51
Trim54-201ENSMUST00000013771 Psrc1Q9D0P7 329 aa24.47■■□□□ 1.51
Trim54-201ENSMUST00000013771 Kdm2bQ6P1G2 1309 aa24.45■■□□□ 1.5
Trim54-201ENSMUST00000013771 Sipa1l1Q8C0T5 1782 aa24.45■■□□□ 1.5
Trim54-201ENSMUST00000013771 Dixdc1Q80Y83 711 aa24.43■■□□□ 1.5
Trim54-201ENSMUST00000013771 Abca15E9PWH4 1668 aa24.42■■□□□ 1.5
Trim54-201ENSMUST00000013771 Znf316Q6PGE4 1016 aa24.42■■□□□ 1.5
Trim54-201ENSMUST00000013771 Sgsm1Q8BPQ7 1093 aa24.42■■□□□ 1.5
Trim54-201ENSMUST00000013771 Usp40Q8BWR4 1235 aa24.42■■□□□ 1.5
Trim54-201ENSMUST00000013771 Polr3aB2RXC6 1390 aa24.42■■□□□ 1.5
Trim54-201ENSMUST00000013771 Cdhr2E9Q7P9 1308 aa24.38■■□□□ 1.49
Trim54-201ENSMUST00000013771 Tnrc6cQ3UHC0 1690 aaKnown RBP24.38■■□□□ 1.49
Trim54-201ENSMUST00000013771 Fyb1O35601 819 aa24.38■■□□□ 1.49
Trim54-201ENSMUST00000013771 Eid3Q3V124 375 aa24.38■■□□□ 1.49
Trim54-201ENSMUST00000013771 Sf3b2Q3UJB0 878 aaKnown RBP24.37■■□□□ 1.49
Trim54-201ENSMUST00000013771 Nrxn1Q9CS84 1514 aa24.36■■□□□ 1.49
Trim54-201ENSMUST00000013771 RalgapbQ8BQZ4 1484 aa24.36■■□□□ 1.49
Trim54-201ENSMUST00000013771 Slc35g1Q8BY79 368 aa24.35■■□□□ 1.49
Trim54-201ENSMUST00000013771 Tnrc6bQ8BKI2 1810 aaKnown RBP24.33■■□□□ 1.49
Trim54-201ENSMUST00000013771 Ccdc6D3YZP9 469 aa24.33■■□□□ 1.49
Trim54-201ENSMUST00000013771 Shank2Q80Z38 1476 aa24.32■■□□□ 1.48
Trim54-201ENSMUST00000013771 Cpsf1Q9EPU4 1441 aaKnown RBP24.32■■□□□ 1.48
Trim54-201ENSMUST00000013771 Cdk19Q8BWD8 501 aa24.32■■□□□ 1.48
Trim54-201ENSMUST00000013771 ZgpatQ8VDM1 511 aa24.32■■□□□ 1.48
Trim54-201ENSMUST00000013771 Nfat5Q9WV30 1534 aa24.31■■□□□ 1.48
Trim54-201ENSMUST00000013771 Txnrd1Q9JMH6 613 aa24.31■■□□□ 1.48
Trim54-201ENSMUST00000013771 Tnks1bp1P58871 1720 aa24.3■■□□□ 1.48
Trim54-201ENSMUST00000013771 Mon2Q80TL7 1715 aa24.3■■□□□ 1.48
Trim54-201ENSMUST00000013771 Rtl5Q5DTT4 599 aa24.3■■□□□ 1.48
Trim54-201ENSMUST00000013771 Pola1P33609 1465 aa24.29■■□□□ 1.48
Trim54-201ENSMUST00000013771 Sugp2Q8CH09 1067 aa24.29■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms