RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Atp2b2Q9R0K7 1198 aa20.45■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Nwd1A6H603 1563 aa20.43■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Mink1Q9JM52 1308 aa20.42■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Abca14E9Q8F8 1683 aa20.41■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Sall2Q9QX96 1004 aa20.41■□□□□ 0.86
Ercc1-201ENSMUST00000003645 InsrP15208 1372 aa20.4■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Tns3Q5SSZ5 1440 aa20.4■□□□□ 0.86
Ercc1-201ENSMUST00000003645 NktrP30415 1453 aa20.4■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Usp32F8VPZ3 1604 aa20.39■□□□□ 0.86
Ercc1-201ENSMUST00000003645 Sbno1Q689Z5 1390 aa20.39■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Tubgcp6G5E8P0 1769 aa20.38■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Q3UJC8 639 aa20.37■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Cdk19Q8BWD8 501 aa20.36■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Tmem94Q7TSH8 1360 aa20.34■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Sirt1Q923E4 737 aa20.34■□□□□ 0.85
Ercc1-201ENSMUST00000003645 Gsto1O09131 240 aa20.33■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Supt5hO55201 1082 aaKnown RBP20.32■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Rreb1Q3UH06 1700 aaKnown RBP20.31■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Pik3c2bE9QAN8 1632 aa20.31■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Unc13bQ9Z1N9 1602 aa20.31■□□□□ 0.84
Ercc1-201ENSMUST00000003645 PrxO55103 1391 aa20.31■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Slc24a1Q91WD8 1130 aa20.31■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Mapk8ip2Q9ERE9 830 aa20.3■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Slc4a1apE9PX68 744 aa20.29■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Col18a1P39061 1774 aa20.29■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Gli3Q61602 1583 aa20.28■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Slain2Q8CI08 581 aa20.28■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Pank3Q8R2W9 370 aa20.28■□□□□ 0.84
Ercc1-201ENSMUST00000003645 D430041D05RikF6ZGR6 1678 aa20.28■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Kif20bQ80WE4 1774 aaKnown RBP20.28■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Gm10563F6WIE4 79 aa20.27■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Fam184bQ0KK56 942 aa20.27■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Zranb1Q7M760 708 aa20.27■□□□□ 0.84
Ercc1-201ENSMUST00000003645 Tmf1B9EKI3 1091 aa20.26■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Exosc9Q9JHI7 438 aaKnown RBP20.26■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Col14a1Q80X19 1797 aa20.26■□□□□ 0.83
Ercc1-201ENSMUST00000003645 FanciQ8K368 1330 aa20.25■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Als2Q920R0 1651 aa20.24■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Amigo3Q8C2S7 508 aa20.24■□□□□ 0.83
Ercc1-201ENSMUST00000003645 NalcnQ8BXR5 1738 aa20.23■□□□□ 0.83
Ercc1-201ENSMUST00000003645 C3P01027 1663 aa20.23■□□□□ 0.83
Ercc1-201ENSMUST00000003645 C5P06684 1680 aa20.23■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Cnga1P29974 684 aa20.22■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Idi2Q8BFZ6 227 aa20.22■□□□□ 0.83
Ercc1-201ENSMUST00000003645 Inpp5dQ9ES52 1191 aa20.22■□□□□ 0.83
Ercc1-201ENSMUST00000003645 PtpruB1AUH1 1446 aa20.2■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Map3k19E9Q3S4 1311 aa20.2■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Iqsec2Q5DU25 1478 aa20.2■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Adgrl1Q80TR1 1466 aa20.19■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Evi5lH3BKQ3 813 aa20.19■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Idi1P58044 227 aa20.19■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Zscan10Q3URR7 782 aa20.19■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Nrxn1Q9CS84 1514 aa20.16■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Tnrc6bQ8BKI2 1810 aaKnown RBP20.15■□□□□ 0.82
Ercc1-201ENSMUST00000003645 Abcc10Q8R4P9 1501 aa20.14■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Znf316Q6PGE4 1016 aa20.14■□□□□ 0.81
Ercc1-201ENSMUST00000003645 N4bp2F8VQG7 1678 aaKnown RBP20.14■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Sipa1l2Q80TE4 1722 aa20.14■□□□□ 0.81
Ercc1-201ENSMUST00000003645 CatipB9EKE5 520 aa20.13■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Gprasp1Q5U4C1 1347 aa20.13■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Brinp3Q499E0 766 aa20.11■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Tmem2Q5FWI3 1383 aa20.11■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Mon2Q80TL7 1715 aa20.1■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Smg6P61406 1418 aaKnown RBP20.09■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Znf335A2A5K6 1337 aa20.09■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Atf3Q60765 181 aa20.09■□□□□ 0.81
Ercc1-201ENSMUST00000003645 Camta1A2A891 1682 aa20.08■□□□□ 0.81
Ercc1-201ENSMUST00000003645 NinlQ6ZQ12 1394 aa20.08■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Sox12Q04890 314 aa20.08■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Ap3b2Q9JME5 1082 aa20.08■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Kcna6Q61923 529 aa20.07■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Dcaf11Q91VU6 549 aa20.07■□□□□ 0.8
Ercc1-201ENSMUST00000003645 NgefQ8CHT1 710 aa20.06■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Pcgf6Q99NA9 353 aa20.06■□□□□ 0.8
Ercc1-201ENSMUST00000003645 KdrP35918 1367 aa20.05■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Kif7B7ZNG0 1348 aa20.02■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Wnk3Q80XP9 1757 aa20.02■□□□□ 0.8
Ercc1-201ENSMUST00000003645 Farp2Q91VS8 1065 aa20.01■□□□□ 0.79
Ercc1-201ENSMUST00000003645 Kif16bB1AVY7 1312 aa20■□□□□ 0.79
Ercc1-201ENSMUST00000003645 DccP70211 1447 aa19.98■□□□□ 0.79
Ercc1-201ENSMUST00000003645 Wdr17E9Q271 1322 aa19.98■□□□□ 0.79
Ercc1-201ENSMUST00000003645 Prdm10Q3UTQ7 1184 aa19.97■□□□□ 0.79
Ercc1-201ENSMUST00000003645 Slc35g1Q8BY79 368 aa19.95■□□□□ 0.79
Ercc1-201ENSMUST00000003645 Kif1aP33173 1695 aa19.95■□□□□ 0.78
Ercc1-201ENSMUST00000003645 GnpatP98192 678 aa19.95■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Wwc2Q6NXJ0 1187 aa19.95■□□□□ 0.78
Ercc1-201ENSMUST00000003645 IbtkQ6ZPR6 1352 aaKnown RBP19.94■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Astn2Q80Z10 1352 aa19.94■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Ppp2r1aQ76MZ3 589 aa19.94■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Exoc6Q8R313 802 aa19.93■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Frmpd2A0A140LI67 1392 aa19.91■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Col16a1Q8BLX7 1580 aa19.91■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Rab3gap2Q8BMG7 1366 aa19.91■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Pik3c2aQ61194 1686 aa19.9■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Hspa1lP16627 641 aa19.9■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Anp32bQ9EST5 272 aaKnown RBP19.9■□□□□ 0.78
Ercc1-201ENSMUST00000003645 CemipQ8BI06 1361 aa19.9■□□□□ 0.78
Ercc1-201ENSMUST00000003645 Cald1E9QA15 768 aaKnown RBP19.89■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Fyb1O35601 819 aa19.89■□□□□ 0.77
Ercc1-201ENSMUST00000003645 Ddx17Q501J6 650 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms